RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 DUSP12Q9UNI6 340 aa13.96□□□□□ -0.17
COPS7A-207ENST00000538375 TRAV19A0A0A6YYK7 116 aa13.95□□□□□ -0.18
COPS7A-207ENST00000538375 TMEM221A6NGB7 291 aa13.95□□□□□ -0.18
COPS7A-207ENST00000538375 M0R296 226 aa13.95□□□□□ -0.18
COPS7A-207ENST00000538375 STK25O00506 426 aa13.95□□□□□ -0.18
COPS7A-207ENST00000538375 PAEPP09466 180 aa13.95□□□□□ -0.18
COPS7A-207ENST00000538375 SRFP11831 508 aa13.95□□□□□ -0.18
COPS7A-207ENST00000538375 NPR3P17342 541 aa13.95□□□□□ -0.18
COPS7A-207ENST00000538375 HDCP19113 662 aa13.95□□□□□ -0.18
COPS7A-207ENST00000538375 PPP3CCP48454 512 aa13.95□□□□□ -0.18
COPS7A-207ENST00000538375 COPB1P53618 953 aaKnown RBP13.95□□□□□ -0.18
COPS7A-207ENST00000538375 KCNMA1Q12791 1236 aa13.95□□□□□ -0.18
COPS7A-207ENST00000538375 NCAPHQ15003 741 aa13.95□□□□□ -0.18
COPS7A-207ENST00000538375 ZSCAN23Q3MJ62 389 aa13.95□□□□□ -0.18
COPS7A-207ENST00000538375 ARHGAP17Q68EM7 881 aa13.95□□□□□ -0.18
COPS7A-207ENST00000538375 VITQ6UXI7 678 aa13.95□□□□□ -0.18
COPS7A-207ENST00000538375 ARL14EPQ8N8R7 260 aaPredicted RBP13.95□□□□□ -0.18
COPS7A-207ENST00000538375 ANKRD52Q8NB46 1076 aa13.95□□□□□ -0.18
COPS7A-207ENST00000538375 PBXIP1Q96AQ6 731 aa13.95□□□□□ -0.18
COPS7A-207ENST00000538375 E2F7Q96AV8 911 aa13.95□□□□□ -0.18
COPS7A-207ENST00000538375 TTLL2Q9BWV7 592 aa13.95□□□□□ -0.18
COPS7A-207ENST00000538375 LSM14BQ9BX40 385 aaKnown RBP13.95□□□□□ -0.18
COPS7A-207ENST00000538375 FBXO44Q9H4M3 255 aa13.95□□□□□ -0.18
COPS7A-207ENST00000538375 BRD9Q9H8M2 597 aa13.95□□□□□ -0.18
COPS7A-207ENST00000538375 COMMD8Q9NX08 183 aa13.95□□□□□ -0.18
COPS7A-207ENST00000538375 ZMYM5Q9UJ78 669 aa13.95□□□□□ -0.18
COPS7A-207ENST00000538375 TSPAN16Q9UKR8 245 aa13.95□□□□□ -0.18
COPS7A-207ENST00000538375 CA14Q9ULX7 337 aa13.95□□□□□ -0.18
COPS7A-207ENST00000538375 C2orf78A6NCI8 922 aa13.94□□□□□ -0.18
COPS7A-207ENST00000538375 ZNF840PA6NDX5 716 aa13.94□□□□□ -0.18
COPS7A-207ENST00000538375 TNFRSF10BO14763 440 aa13.94□□□□□ -0.18
COPS7A-207ENST00000538375 ZNF263O14978 683 aa13.94□□□□□ -0.18
COPS7A-207ENST00000538375 CKMP06732 381 aa13.94□□□□□ -0.18
COPS7A-207ENST00000538375 USP17L7P0C7H9 530 aa13.94□□□□□ -0.18
COPS7A-207ENST00000538375 PSMC3P17980 439 aa13.94□□□□□ -0.18
COPS7A-207ENST00000538375 RFX1P22670 979 aa13.94□□□□□ -0.18
COPS7A-207ENST00000538375 FCARP24071 287 aa13.94□□□□□ -0.18
COPS7A-207ENST00000538375 BRD2P25440 801 aaKnown RBP13.94□□□□□ -0.18
COPS7A-207ENST00000538375 GDI1P31150 447 aa13.94□□□□□ -0.18
COPS7A-207ENST00000538375 NFKBIBQ15653 356 aa13.94□□□□□ -0.18
COPS7A-207ENST00000538375 PDZD8Q8NEN9 1154 aa13.94□□□□□ -0.18
COPS7A-207ENST00000538375 TFAP2BQ92481 460 aa13.94□□□□□ -0.18
COPS7A-207ENST00000538375 SLC22A12Q96S37 553 aa13.94□□□□□ -0.18
COPS7A-207ENST00000538375 BPIFA3Q9BQP9 254 aa13.94□□□□□ -0.18
COPS7A-207ENST00000538375 KCNH6Q9H252 994 aa13.94□□□□□ -0.18
COPS7A-207ENST00000538375 MFSD1Q9H3U5 465 aa13.94□□□□□ -0.18
COPS7A-207ENST00000538375 TDP1Q9NUW8 608 aa13.94□□□□□ -0.18
COPS7A-207ENST00000538375 LIMA1Q9UHB6 759 aaKnown RBP13.94□□□□□ -0.18
COPS7A-207ENST00000538375 C5orf42Q9H799 3197 aa13.94□□□□□ -0.18
COPS7A-207ENST00000538375 SOBPA7XYQ1 873 aa13.93□□□□□ -0.18
COPS7A-207ENST00000538375 TADA3O75528 432 aa13.93□□□□□ -0.18
COPS7A-207ENST00000538375 PRAMEF12O95522 483 aa13.93□□□□□ -0.18
COPS7A-207ENST00000538375 ATP1A3P13637 1013 aa13.93□□□□□ -0.18
COPS7A-207ENST00000538375 PDE6CP51160 858 aa13.93□□□□□ -0.18
COPS7A-207ENST00000538375 UBXN1Q04323 297 aa13.93□□□□□ -0.18
COPS7A-207ENST00000538375 PDE4CQ08493 712 aa13.93□□□□□ -0.18
COPS7A-207ENST00000538375 RAPGEF1Q13905 1077 aa13.93□□□□□ -0.18
COPS7A-207ENST00000538375 CNGA2Q16280 664 aa13.93□□□□□ -0.18
COPS7A-207ENST00000538375 CC2D1AQ6P1N0 951 aaPredicted RBP13.93□□□□□ -0.18
COPS7A-207ENST00000538375 GPRIN1Q7Z2K8 1008 aa13.93□□□□□ -0.18
COPS7A-207ENST00000538375 ALYREFQ86V81 257 aaKnown RBP13.93□□□□□ -0.18
COPS7A-207ENST00000538375 PIGZQ86VD9 579 aa13.93□□□□□ -0.18
COPS7A-207ENST00000538375 MFSD6LQ8IWD5 586 aa13.93□□□□□ -0.18
COPS7A-207ENST00000538375 DHX40Q8IX18 779 aaKnown RBP13.93□□□□□ -0.18
COPS7A-207ENST00000538375 SIX5Q8N196 739 aa13.93□□□□□ -0.18
COPS7A-207ENST00000538375 CELF5Q8N6W0 485 aaKnown RBP13.93□□□□□ -0.18
COPS7A-207ENST00000538375 BPIFB1Q8TDL5 484 aa13.93□□□□□ -0.18
COPS7A-207ENST00000538375 DEPDC1BQ8WUY9 529 aa13.93□□□□□ -0.18
COPS7A-207ENST00000538375 RSPRY1Q96DX4 576 aa13.93□□□□□ -0.18
COPS7A-207ENST00000538375 FUCA2Q9BTY2 467 aa13.93□□□□□ -0.18
COPS7A-207ENST00000538375 NACA2Q9H009 215 aa13.93□□□□□ -0.18
COPS7A-207ENST00000538375 TRPV4Q9HBA0 871 aa13.93□□□□□ -0.18
COPS7A-207ENST00000538375 LRRC4Q9HBW1 653 aa13.93□□□□□ -0.18
COPS7A-207ENST00000538375 SIX2Q9NPC8 291 aa13.93□□□□□ -0.18
COPS7A-207ENST00000538375 THG1LQ9NWX6 298 aaKnown RBP13.93□□□□□ -0.18
COPS7A-207ENST00000538375 GMIPQ9P107 970 aa13.93□□□□□ -0.18
COPS7A-207ENST00000538375 MYO10Q9HD67 2058 aa13.93□□□□□ -0.18
COPS7A-207ENST00000538375 WDFY4Q6ZS81 3184 aa13.93□□□□□ -0.18
COPS7A-207ENST00000538375 HHLA1C9JL84 531 aa13.92□□□□□ -0.18
COPS7A-207ENST00000538375 M0QYV0 167 aa13.92□□□□□ -0.18
COPS7A-207ENST00000538375 O00370 1275 aa13.92□□□□□ -0.18
COPS7A-207ENST00000538375 CYP26A1O43174 497 aa13.92□□□□□ -0.18
COPS7A-207ENST00000538375 THAP12O43422 761 aa13.92□□□□□ -0.18
COPS7A-207ENST00000538375 MED7O43513 233 aa13.92□□□□□ -0.18
COPS7A-207ENST00000538375 MBL2P11226 248 aaPredicted RBP13.92□□□□□ -0.18
COPS7A-207ENST00000538375 BCAT1P54687 386 aa13.92□□□□□ -0.18
COPS7A-207ENST00000538375 TPM4P67936 248 aa13.92□□□□□ -0.18
COPS7A-207ENST00000538375 PFKPQ01813 784 aa13.92□□□□□ -0.18
COPS7A-207ENST00000538375 NHLH1Q02575 133 aa13.92□□□□□ -0.18
COPS7A-207ENST00000538375 BST2Q10589 180 aaKnown RBP13.92□□□□□ -0.18
COPS7A-207ENST00000538375 STILQ15468 1287 aa13.92□□□□□ -0.18
COPS7A-207ENST00000538375 HECTD3Q5T447 861 aa13.92□□□□□ -0.18
COPS7A-207ENST00000538375 KLHDC7AQ5VTJ3 777 aa13.92□□□□□ -0.18
COPS7A-207ENST00000538375 LCLAT1Q6UWP7 414 aa13.92□□□□□ -0.18
COPS7A-207ENST00000538375 HFE2Q6ZVN8 426 aa13.92□□□□□ -0.18
COPS7A-207ENST00000538375 TTC30AQ86WT1 665 aa13.92□□□□□ -0.18
COPS7A-207ENST00000538375 FLCNQ8NFG4 579 aa13.92□□□□□ -0.18
COPS7A-207ENST00000538375 OVCA2Q8WZ82 227 aa13.92□□□□□ -0.18
COPS7A-207ENST00000538375 IRF7Q92985 503 aa13.92□□□□□ -0.18
COPS7A-207ENST00000538375 USP13Q92995 863 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms