RNA–Protein interactions for RNA: ENST00000538144.5

PXN-208, Transcript of paxillin, humanhuman

TSL 1 (best)

Gene PXN, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-208ENST00000538144 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.9■□□□□ 0.14
PXN-208ENST00000538144 SMARCD1Q96GM5 515 aa15.9■□□□□ 0.14
PXN-208ENST00000538144 YME1L1Q96TA2 773 aa15.9■□□□□ 0.14
PXN-208ENST00000538144 MIF4GDA9UHW6 222 aaKnown RBP15.89■□□□□ 0.13
PXN-208ENST00000538144 F8VP50 259 aa15.89■□□□□ 0.13
PXN-208ENST00000538144 SSR1P43307 286 aaKnown RBP15.89■□□□□ 0.13
PXN-208ENST00000538144 ACADSBP45954 432 aa15.89■□□□□ 0.13
PXN-208ENST00000538144 ADIGQ0VDE8 80 aa15.89■□□□□ 0.13
PXN-208ENST00000538144 MRPL58Q14197 206 aaKnown RBP15.89■□□□□ 0.13
PXN-208ENST00000538144 MAPRE1Q15691 268 aaKnown RBP15.89■□□□□ 0.13
PXN-208ENST00000538144 RTP2Q5QGT7 225 aa15.89■□□□□ 0.13
PXN-208ENST00000538144 CCDC181Q5TID7 509 aa15.89■□□□□ 0.13
PXN-208ENST00000538144 SPATA2LQ8IUW3 424 aaPredicted RBP15.89■□□□□ 0.13
PXN-208ENST00000538144 CMTR2Q8IYT2 770 aaKnown RBP15.89■□□□□ 0.13
PXN-208ENST00000538144 UBL4BQ8N7F7 174 aa15.89■□□□□ 0.13
PXN-208ENST00000538144 ZMIZ2Q8NF64 920 aa15.89■□□□□ 0.13
PXN-208ENST00000538144 ALG3Q92685 438 aa15.89■□□□□ 0.13
PXN-208ENST00000538144 IGSF21Q96ID5 467 aa15.89■□□□□ 0.13
PXN-208ENST00000538144 PBKQ96KB5 322 aa15.89■□□□□ 0.13
PXN-208ENST00000538144 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.89■□□□□ 0.133e-7■■□□□ 14.4
PXN-208ENST00000538144 ZCWPW1Q9H0M4 648 aa15.89■□□□□ 0.13
PXN-208ENST00000538144 CYLDQ9NQC7 956 aa15.89■□□□□ 0.13
PXN-208ENST00000538144 MRPL42Q9Y6G3 142 aaKnown RBP15.89■□□□□ 0.13
PXN-208ENST00000538144 CEP104O60308 925 aa15.89■□□□□ 0.13
PXN-208ENST00000538144 PSMA2P25787 234 aa15.89■□□□□ 0.13
PXN-208ENST00000538144 CTNNA1P35221 906 aaKnown RBP15.89■□□□□ 0.13
PXN-208ENST00000538144 NDUFV1P49821 464 aa15.89■□□□□ 0.13
PXN-208ENST00000538144 FAM193AP78312 1265 aa15.89■□□□□ 0.13
PXN-208ENST00000538144 PIGHQ14442 188 aaPredicted RBP15.89■□□□□ 0.13
PXN-208ENST00000538144 TMEM240Q5SV17 173 aa15.89■□□□□ 0.13
PXN-208ENST00000538144 DCAF12L1Q5VU92 463 aa15.89■□□□□ 0.13
PXN-208ENST00000538144 ZNF280DQ6N043 979 aa15.89■□□□□ 0.13
PXN-208ENST00000538144 DCP1BQ8IZD4 617 aaKnown RBP15.89■□□□□ 0.13
PXN-208ENST00000538144 KCTD13Q8WZ19 329 aa15.89■□□□□ 0.13
PXN-208ENST00000538144 NDRG1Q92597 394 aaKnown RBP15.89■□□□□ 0.13
PXN-208ENST00000538144 TTPALQ9BTX7 342 aa15.89■□□□□ 0.13
PXN-208ENST00000538144 LRRC4Q9HBW1 653 aa15.89■□□□□ 0.13
PXN-208ENST00000538144 CXXC1Q9P0U4 656 aaPredicted RBP15.89■□□□□ 0.13
PXN-208ENST00000538144 TMEM59LQ9UK28 342 aa15.89■□□□□ 0.13
PXN-208ENST00000538144 ZMYND8Q9ULU4 1186 aaPredicted RBP15.89■□□□□ 0.13
PXN-208ENST00000538144 PCDHA3Q9Y5H8 950 aa15.89■□□□□ 0.13
PXN-208ENST00000538144 MCM3P25205 808 aa15.88■□□□□ 0.13
PXN-208ENST00000538144 CTNNA2P26232 953 aa15.88■□□□□ 0.13
PXN-208ENST00000538144 PEX5P50542 639 aa15.88■□□□□ 0.13
PXN-208ENST00000538144 TKTL1P51854 596 aa15.88■□□□□ 0.13
PXN-208ENST00000538144 ARPP19P56211 112 aa15.88■□□□□ 0.13
PXN-208ENST00000538144 TAS2R40P59535 323 aa15.88■□□□□ 0.13
PXN-208ENST00000538144 ZNF211Q13398 564 aaPredicted RBP15.88■□□□□ 0.13
PXN-208ENST00000538144 C4orf50Q6ZRC1 276 aa15.88■□□□□ 0.13
PXN-208ENST00000538144 ZDHHC17Q8IUH5 632 aa15.88■□□□□ 0.13
PXN-208ENST00000538144 KHSRPQ92945 711 aaKnown RBP eCLIP15.88■□□□□ 0.13
PXN-208ENST00000538144 ZNF558Q96NG5 402 aa15.88■□□□□ 0.13
PXN-208ENST00000538144 CSNK1G1Q9HCP0 422 aa15.88■□□□□ 0.13
PXN-208ENST00000538144 RNF14Q9UBS8 474 aa15.88■□□□□ 0.13
PXN-208ENST00000538144 KIAA1671Q9BY89 1806 aa15.88■□□□□ 0.13
PXN-208ENST00000538144 CCDC66A2RUB6 948 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 CES2O00748 559 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 CYP2F1P24903 491 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 MAN1A1P33908 653 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 FLT3P36888 993 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 PAFAH1B1P43034 410 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 DMTNQ08495 405 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 CFAP221Q4G0U5 840 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 TRNP1Q6NT89 227 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 PRSS55Q6UWB4 352 aaPredicted RBP15.87■□□□□ 0.13
PXN-208ENST00000538144 GPRIN1Q7Z2K8 1008 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 RXFP2Q8WXD0 754 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 PGLYRP2Q96PD5 576 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 HTATIP2Q9BUP3 242 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 VN1R3Q9BXE9 311 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 ABI2Q9NYB9 513 aaPredicted RBP15.87■□□□□ 0.13
PXN-208ENST00000538144 LCMT1Q9UIC8 334 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 C2CD4BA6NLJ0 364 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 HHLA1C9JL84 531 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 H7C4K7 107 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 GJB5O95377 273 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 EFEMP2O95967 443 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 TCF4P15884 667 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 PDGFRAP16234 1089 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 GPD1P21695 349 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 GJC1P36383 396 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 USP41Q3LFD5 358 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 AADACL2Q6P093 401 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 PSRC1Q6PGN9 363 aaPredicted RBP15.87■□□□□ 0.13
PXN-208ENST00000538144 RSPO2Q6UXX9 243 aaPredicted RBP15.87■□□□□ 0.13
PXN-208ENST00000538144 ANKS3Q6ZW76 656 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 HDXQ7Z353 690 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 SIX6OS1Q8N1H7 587 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 SLC39A11Q8N1S5 342 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 NIPA2Q8N8Q9 360 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 COLGALT1Q8NBJ5 622 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 SPATA4Q8NEY3 305 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 FNIP1Q8TF40 1166 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 ZBED2Q9BTP6 218 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 CARD9Q9H257 536 aa15.87■□□□□ 0.13
PXN-208ENST00000538144 DMAP1Q9NPF5 467 aaPredicted RBP15.87■□□□□ 0.13
PXN-208ENST00000538144 OR6C75A6NL08 312 aa15.86■□□□□ 0.13
PXN-208ENST00000538144 CAPN15O75808 1086 aa15.86■□□□□ 0.13
PXN-208ENST00000538144 LAG3P18627 525 aa15.86■□□□□ 0.13
PXN-208ENST00000538144 GRIK1P39086 918 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms