RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 AFG3L2Q9Y4W6 797 aa14.72□□□□□ -0.05
CLPB-209ENST00000538039 SPATA31C2B4DYI2 1134 aa14.72□□□□□ -0.05
CLPB-209ENST00000538039 ABLIM1O14639 778 aa14.72□□□□□ -0.05
CLPB-209ENST00000538039 MT-ND3P03897 115 aa14.72□□□□□ -0.05
CLPB-209ENST00000538039 RBP3P10745 1247 aa14.72□□□□□ -0.05
CLPB-209ENST00000538039 RARBP10826 455 aa14.72□□□□□ -0.05
CLPB-209ENST00000538039 EIF3EP60228 445 aaKnown RBP14.72□□□□□ -0.05
CLPB-209ENST00000538039 FYB2Q5VWT5 728 aa14.72□□□□□ -0.05
CLPB-209ENST00000538039 TMEM35BQ8NCS4 154 aa14.72□□□□□ -0.05
CLPB-209ENST00000538039 LPAR1Q92633 364 aa14.72□□□□□ -0.05
CLPB-209ENST00000538039 TRIM55Q9BYV6 548 aa14.72□□□□□ -0.05
CLPB-209ENST00000538039 SLC17A6Q9P2U8 582 aa14.72□□□□□ -0.05
CLPB-209ENST00000538039 MAFBQ9Y5Q3 323 aaPredicted RBP14.72□□□□□ -0.05
CLPB-209ENST00000538039 PPP1R12AO14974 1030 aaPredicted RBP14.71□□□□□ -0.05
CLPB-209ENST00000538039 MSCO60682 206 aa14.71□□□□□ -0.05
CLPB-209ENST00000538039 CCDC22O60826 627 aa14.71□□□□□ -0.05
CLPB-209ENST00000538039 PSMG1O95456 288 aa14.71□□□□□ -0.05
CLPB-209ENST00000538039 ACADSP16219 412 aa14.71□□□□□ -0.05
CLPB-209ENST00000538039 TFAMQ00059 246 aaKnown RBP14.71□□□□□ -0.05
CLPB-209ENST00000538039 SLC18A2Q05940 514 aa14.71□□□□□ -0.05
CLPB-209ENST00000538039 ENPEPQ07075 957 aa14.71□□□□□ -0.05
CLPB-209ENST00000538039 CXCL9Q07325 125 aa14.71□□□□□ -0.05
CLPB-209ENST00000538039 THOC5Q13769 683 aaKnown RBP14.71□□□□□ -0.05
CLPB-209ENST00000538039 CIAPIN1Q6FI81 312 aa14.71□□□□□ -0.05
CLPB-209ENST00000538039 RFX6Q8HWS3 928 aa14.71□□□□□ -0.05
CLPB-209ENST00000538039 RDM1Q8NG50 284 aa14.71□□□□□ -0.05
CLPB-209ENST00000538039 SPATA18Q8TC71 538 aa14.71□□□□□ -0.05
CLPB-209ENST00000538039 SLC44A1Q8WWI5 657 aa14.71□□□□□ -0.05
CLPB-209ENST00000538039 CFAP36Q96G28 342 aa14.71□□□□□ -0.05
CLPB-209ENST00000538039 OXNAD1Q96HP4 312 aaPredicted RBP14.71□□□□□ -0.05
CLPB-209ENST00000538039 CALN1Q9BXU9 219 aa14.71□□□□□ -0.05
CLPB-209ENST00000538039 STRIP2Q9ULQ0 834 aa14.71□□□□□ -0.05
CLPB-209ENST00000538039 B4GALT5O43286 388 aa14.71□□□□□ -0.06
CLPB-209ENST00000538039 GRAP2O75791 330 aa14.71□□□□□ -0.06
CLPB-209ENST00000538039 TROVE2P10155 538 aaKnown RBP eCLIP14.71□□□□□ -0.06
CLPB-209ENST00000538039 CDH5P33151 784 aaPredicted RBP14.71□□□□□ -0.06
CLPB-209ENST00000538039 NAMPTP43490 491 aa14.71□□□□□ -0.06
CLPB-209ENST00000538039 SERPINB4P48594 390 aa14.71□□□□□ -0.06
CLPB-209ENST00000538039 PSMC1P62191 440 aaKnown RBP14.71□□□□□ -0.06
CLPB-209ENST00000538039 SMAD1Q15797 465 aaKnown RBP14.71□□□□□ -0.06
CLPB-209ENST00000538039 C15orf59Q2T9L4 293 aaPredicted RBP14.71□□□□□ -0.06
CLPB-209ENST00000538039 MUM1Q2TAK8 710 aa14.71□□□□□ -0.06
CLPB-209ENST00000538039 ZC3H12AQ5D1E8 599 aaKnown RBP14.71□□□□□ -0.06
CLPB-209ENST00000538039 ZCCHC23Q6ZST2 131 aa14.71□□□□□ -0.06
CLPB-209ENST00000538039 XYLT1Q86Y38 959 aa14.71□□□□□ -0.06
CLPB-209ENST00000538039 UNC5BQ8IZJ1 945 aa14.71□□□□□ -0.06
CLPB-209ENST00000538039 SLC25A41Q8N5S1 370 aa14.71□□□□□ -0.06
CLPB-209ENST00000538039 PRPF31Q8WWY3 499 aaKnown RBP14.71□□□□□ -0.06
CLPB-209ENST00000538039 EBF4Q9BQW3 602 aa14.71□□□□□ -0.06
CLPB-209ENST00000538039 TTLL3Q9Y4R7 772 aa14.71□□□□□ -0.06
CLPB-209ENST00000538039 CAPN14A8MX76 684 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 E7ENQ6 273 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 ATP2A1O14983 1001 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 TM9SF1O15321 606 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 CSDE1O75534 798 aaKnown RBP14.7□□□□□ -0.06
CLPB-209ENST00000538039 USP1O94782 785 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 OATP04181 439 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 HOXC6P09630 235 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 SRGAP2CP0DJJ0 459 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 YWHAGP61981 247 aaKnown RBP eCLIP14.7□□□□□ -0.06
CLPB-209ENST00000538039 SEPT7Q16181 437 aaKnown RBP14.7□□□□□ -0.06
CLPB-209ENST00000538039 NBPF12Q5TAG4 269 aaPredicted RBP14.7□□□□□ -0.06
CLPB-209ENST00000538039 TRMT10BQ6PF06 316 aaKnown RBP14.7□□□□□ -0.06
CLPB-209ENST00000538039 C1orf228Q6PIY5 440 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 MPP5Q8N3R9 675 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 KCTD6Q8NC69 237 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 IFT43Q96FT9 208 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 SRPK1Q96SB4 655 aaKnown RBP14.7□□□□□ -0.06
CLPB-209ENST00000538039 SLC13A1Q9BZW2 595 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 GPATCH2LQ9NWQ4 482 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 TRIM49D1C9J1S8 452 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 ENO1P06733 434 aaKnown RBP14.7□□□□□ -0.06
CLPB-209ENST00000538039 CD19P15391 556 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 HMGCS2P54868 508 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 RCN2Q14257 317 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 KCNJ11Q14654 390 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 LRRC74BQ6ZQY2 392 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 BRSK2Q8IWQ3 736 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 RBM15BQ8NDT2 890 aaKnown RBP14.7□□□□□ -0.06
CLPB-209ENST00000538039 APOPT1Q96IL0 206 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 USP29Q9HBJ7 922 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 ZNF302Q9NR11 478 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 DDX56Q9NY93 547 aaKnown RBP14.7□□□□□ -0.06
CLPB-209ENST00000538039 MAP3K20Q9NYL2 800 aaKnown RBP14.7□□□□□ -0.06
CLPB-209ENST00000538039 CEP350Q5VT06 3117 aa14.7□□□□□ -0.06
CLPB-209ENST00000538039 DNAJC6O75061 913 aa14.69□□□□□ -0.06
CLPB-209ENST00000538039 CD1EP15812 388 aa14.69□□□□□ -0.06
CLPB-209ENST00000538039 GRIA1P42261 906 aa14.69□□□□□ -0.06
CLPB-209ENST00000538039 RASSF2P50749 326 aa14.69□□□□□ -0.06
CLPB-209ENST00000538039 BST1Q10588 318 aa14.69□□□□□ -0.06
CLPB-209ENST00000538039 CAND1Q86VP6 1230 aaKnown RBP14.69□□□□□ -0.06
CLPB-209ENST00000538039 TRIM50Q86XT4 487 aa14.69□□□□□ -0.06
CLPB-209ENST00000538039 CCNJLQ8IV13 435 aa14.69□□□□□ -0.06
CLPB-209ENST00000538039 THNSL1Q8IYQ7 743 aa14.69□□□□□ -0.06
CLPB-209ENST00000538039 LRRC71Q8N4P6 559 aa14.69□□□□□ -0.06
CLPB-209ENST00000538039 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.69□□□□□ -0.06
CLPB-209ENST00000538039 NSUN6Q8TEA1 469 aaKnown RBP14.69□□□□□ -0.06
CLPB-209ENST00000538039 TCHPQ9BT92 498 aa14.69□□□□□ -0.06
CLPB-209ENST00000538039 NIF3L1Q9GZT8 377 aa14.69□□□□□ -0.06
CLPB-209ENST00000538039 ZCWPW1Q9H0M4 648 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms