RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 NCKAP1LP55160 1127 aa11.85□□□□□ -0.51
SEMA4D-221ENST00000537934 SNAPC2Q13487 334 aa11.85□□□□□ -0.51
SEMA4D-221ENST00000537934 PRKD1Q15139 912 aaPredicted RBP11.85□□□□□ -0.51
SEMA4D-221ENST00000537934 USP41Q3LFD5 358 aa11.85□□□□□ -0.51
SEMA4D-221ENST00000537934 NOL9Q5SY16 702 aaKnown RBP11.85□□□□□ -0.51
SEMA4D-221ENST00000537934 TRIM50Q86XT4 487 aa11.85□□□□□ -0.51
SEMA4D-221ENST00000537934 GSTCDQ8NEC7 633 aa11.85□□□□□ -0.51
SEMA4D-221ENST00000537934 ATG4AQ8WYN0 398 aa11.85□□□□□ -0.51
SEMA4D-221ENST00000537934 COX4I2Q96KJ9 171 aa11.85□□□□□ -0.51
SEMA4D-221ENST00000537934 MRPL1Q9BYD6 325 aaKnown RBP11.85□□□□□ -0.51
SEMA4D-221ENST00000537934 DCLK3Q9C098 648 aa11.85□□□□□ -0.51
SEMA4D-221ENST00000537934 Q9H521 79 aa11.85□□□□□ -0.51
SEMA4D-221ENST00000537934 AFG3L2Q9Y4W6 797 aa11.85□□□□□ -0.51
SEMA4D-221ENST00000537934 KDM3AQ9Y4C1 1321 aa11.85□□□□□ -0.51
SEMA4D-221ENST00000537934 E9PMD0 336 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 NR3C1P04150 777 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 HOXD13P35453 343 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 FDFT1P37268 417 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 CASP4P49662 377 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 CCR3P51677 355 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 NR1H2P55055 460 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 ITGA7Q13683 1181 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 PCNX4Q63HM2 1172 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 NANOGNBQ7Z5D8 188 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 ALYREFQ86V81 257 aaKnown RBP11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 TCP10LQ8TDR4 215 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 ZC3H15Q8WU90 426 aaKnown RBP11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 ATG4CQ96DT6 458 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 GLT8D2Q9H1C3 349 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 RAVER2Q9HCJ3 691 aaKnown RBP11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 SAYSD1Q9NPB0 183 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 HOMER2Q9NSB8 354 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 UTP6Q9NYH9 597 aaKnown RBP11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 CCPG1Q9ULG6 757 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 A0A088AWK7 358 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 CCDC162PA2VCL2 907 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 C2orf71A6NGG8 1288 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 PIK3CDO00329 1044 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 GSTT2P0CG29 244 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 GSTT2BP0CG30 244 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 PMLP29590 882 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 APOFQ13790 326 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 TRIP10Q15642 601 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 CENPUQ71F23 418 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 JADE3Q92613 823 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 SLC38A10Q9HBR0 1119 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 UVRAGQ9P2Y5 699 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 HESX1Q9UBX0 185 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 PAPPA2Q9BXP8 1791 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 SCN4AP35499 1836 aa11.84□□□□□ -0.51
SEMA4D-221ENST00000537934 PARP14Q460N5 1801 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 IQCA1LA6NCM1 817 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 TTLL13PA6NNM8 815 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 H3BSA7 217 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 NFIBO00712 420 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 ICAM1P05362 532 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 ATP6V1B1P15313 513 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 STIP1P31948 543 aaKnown RBP11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 KDSRQ06136 332 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 AP3B2Q13367 1082 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 HIC1Q14526 733 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 TBCCQ15814 346 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 ANO5Q75V66 913 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 CPNE8Q86YQ8 564 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 SCAIQ8N9R8 606 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 SLC26A7Q8TE54 656 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 NACA2Q9H009 215 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 ZHX3Q9H4I2 956 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 ELP3Q9H9T3 547 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 KCNK4Q9NYG8 393 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 CSADQ9Y600 493 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 LSM1O15116 133 aaKnown RBP11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 KRT18P05783 430 aaKnown RBP11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 UBXN2AP68543 259 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 CREB5Q02930 508 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 CENPCQ03188 943 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 LLGL1Q15334 1064 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 ARSHQ5FYA8 562 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 MAP1SQ66K74 1059 aaPredicted RBP11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 SLC2A7Q6PXP3 512 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 CHSY1Q86X52 802 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 CRYGNQ8WXF5 182 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 ALKBH8Q96BT7 664 aaKnown RBP11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 GCNAQ96QF7 691 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 OSBPL6Q9BZF3 934 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 RSL24D1Q9UHA3 163 aaKnown RBP11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 PADI4Q9UM07 663 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 KIAA1024Q9UPX6 916 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 CLEC11AQ9Y240 323 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 RLFQ13129 1914 aa11.83□□□□□ -0.52
SEMA4D-221ENST00000537934 FAM237BA0A1B0GVD1 139 aa11.82□□□□□ -0.52
SEMA4D-221ENST00000537934 EML1O00423 815 aa11.82□□□□□ -0.52
SEMA4D-221ENST00000537934 CCNT2O60583 730 aaKnown RBP11.82□□□□□ -0.52
SEMA4D-221ENST00000537934 DNAJA2O60884 412 aa11.82□□□□□ -0.52
SEMA4D-221ENST00000537934 IREB2P48200 963 aaKnown RBP11.82□□□□□ -0.52
SEMA4D-221ENST00000537934 TGFBIQ15582 683 aa11.82□□□□□ -0.52
SEMA4D-221ENST00000537934 CCDC142Q17RM4 750 aa11.82□□□□□ -0.52
SEMA4D-221ENST00000537934 ZNF423Q2M1K9 1284 aa11.82□□□□□ -0.52
SEMA4D-221ENST00000537934 OGFRL1Q5TC84 451 aaPredicted RBP11.82□□□□□ -0.52
SEMA4D-221ENST00000537934 POTEHQ6S545 545 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms