RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 MPP4Q96JB8 637 aa2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 PGBD1Q96JS3 809 aa2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 CLIC6Q96NY7 704 aa2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 MAP3K14Q99558 947 aa2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 SPATA25Q9BR10 227 aa2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 SPZ1Q9BXG8 430 aa2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 TM6SF1Q9BZW5 370 aa2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 ALDH8A1Q9H2A2 487 aaPredicted RBP2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 ACAD9Q9H845 621 aa2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 SMURF1Q9HCE7 757 aa2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 NGRNQ9NPE2 291 aaKnown RBP2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 PXMP2Q9NR77 195 aa2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 MKS1Q9NXB0 559 aa2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 RTEL1Q9NZ71 1219 aa2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 B4GALT6Q9UBX8 382 aa2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 DDX20Q9UHI6 824 aaKnown RBP2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 KCNG1Q9UIX4 513 aa2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 ZFP69BQ9UJL9 534 aa2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 ISY1Q9ULR0 285 aaKnown RBP2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 NOL7Q9UMY1 257 aaKnown RBP2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 PCDHA1Q9Y5I3 950 aa2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 MGAMO43451 1857 aa2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 LCTP09848 1927 aa2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 A0A0G2JMZ2 1700 aa2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 WDR19Q8NEZ3 1342 aa2.87□□□□□ -1.95
TNFRSF1A-210ENST00000537842 BRWD1Q9NSI6 2320 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 TRIM43BA6NCK2 446 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 FAM90A27PA6NNH2 459 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 GOLGA8BA8MQT2 603 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 FAM86B1E9PN63 330 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 K7ESF4 209 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 GABRDO14764 452 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 ZBTB43O43298 467 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 FIBPO43427 364 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 PFKFB2O60825 505 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 DUSP11O75319 330 aaKnown RBP2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 TADA3O75528 432 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 PRKD3O94806 890 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 REC8O95072 547 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 APOL3O95236 402 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 FKBP9O95302 570 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 LRG1P02750 347 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 AMY2AP04746 511 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 CYP1A1P04798 512 aaPredicted RBP2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 FAM86B2P0C5J1 330 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 ARP10275 920 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 VDRP11473 427 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 AMY2BP19961 511 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 AKAP5P24588 427 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 IGFBP6P24592 240 aaPredicted RBP2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 CFPP27918 469 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 SMARCA1P28370 1054 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 SARSP49591 514 aaKnown RBP2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 CDK7P50613 346 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 KIF11P52732 1056 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 CLNS1AP54105 237 aaKnown RBP2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 SESN3P58005 492 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 PSMC6P62333 389 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 TLE2Q04725 743 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 ARHGAP1Q07960 439 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 ARHGEF6Q15052 776 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 TCTN1Q2MV58 587 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 DUSP28Q4G0W2 176 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 ATP13A4Q4VNC1 1196 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 CCDC178Q5BJE1 867 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 FAM133BQ5BKY9 247 aaKnown RBP2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 TMEM240Q5SV17 173 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 HYIQ5T013 277 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 JAKMIP3Q5VZ66 844 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 MFSD14CQ5VZR4 134 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 CD276Q5ZPR3 534 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 PGM2L1Q6PCE3 622 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 BLOC1S2Q6QNY1 142 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 CASC1Q6TDU7 716 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 RNF207Q6ZRF8 634 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 SEPT14Q6ZU15 432 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 FKBP9P1Q75LS8 142 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 C16orf59Q7L2K0 433 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 RSRC2Q7L4I2 434 aaKnown RBP2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 GPR155Q7Z3F1 870 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 RALYLQ86SE5 291 aaKnown RBP2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 NLGN4XQ8N0W4 816 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 NXPE1Q8N323 547 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 FNIP1Q8TF40 1166 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 AFG1LQ8WV93 481 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 LENG9Q96B70 501 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 TRIM43Q96BQ3 446 aaPredicted RBP2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 ZBTB10Q96DT7 871 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 HSPBAP1Q96EW2 488 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 AHCYL2Q96HN2 611 aaKnown RBP2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 FUBP3Q96I24 572 aaKnown RBP eCLIP2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 RMDN3Q96TC7 470 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 PCYT2Q99447 389 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 PDCD2LQ9BRP1 358 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 TACO1Q9BSH4 297 aaKnown RBP2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 BOCQ9BWV1 1114 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 AMNQ9BXJ7 453 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 WDR11Q9BZH6 1224 aa2.86□□□□□ -1.95
TNFRSF1A-210ENST00000537842 SENP6Q9GZR1 1112 aaPredicted RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms