RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 DGCR6Q14129 220 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 SMU1Q2TAY7 513 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 HES6Q96HZ4 224 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 THUMPD3Q9BV44 507 aaKnown RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 PUS3Q9BZE2 481 aaKnown RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 C15orf38-AP3S2A0A0A6YYH1 394 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 CCRL2O00421 344 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 STAT3P40763 770 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 HERVK_113P62684 666 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 MRPS22P82650 360 aaKnown RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 SNX17Q15036 470 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 QPRTQ15274 297 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 PYDC2Q56P42 97 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 MFSD14BQ5SR56 506 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 GET4Q7L5D6 327 aaPredicted RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 ARPINQ7Z6K5 226 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 BHLHE22Q8NFJ8 381 aaPredicted RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 OSBP2Q969R2 916 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 A1CFQ9NQ94 594 aaKnown RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 PNPLA3Q9NST1 481 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 GIN1Q9NXP7 522 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 AFF4Q9UHB7 1163 aaKnown RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 WDR62O43379 1518 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 INO80B-WBP1J3KQ70 363 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 VAMP7P51809 220 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 KCNK10P57789 538 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 BLMHQ13867 455 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 UBE2SQ16763 222 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 SLC5A9Q2M3M2 681 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 HEATR6Q6AI08 1181 aaKnown RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 RASSF6Q6ZTQ3 369 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 SNX32Q86XE0 403 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 NLRP4Q96MN2 994 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 INO80BQ9C086 356 aaPredicted RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 TOR3AQ9H497 397 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 TUBGCP4Q9UGJ1 667 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 TDRKHQ9Y2W6 561 aaKnown RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 ALDH1A3P47895 512 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 EXOSC10Q01780 885 aaKnown RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 ITGA7Q13683 1181 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 ITGA9Q13797 1035 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 C1orf131Q8NDD1 294 aaKnown RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 RBM17Q96I25 401 aaKnown RBP5.86□□□□□ -1.47
CSMD1-215ENST00000537824 AGAP3Q96P47 875 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 AMNQ9BXJ7 453 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 PCDHGB4Q9UN71 923 aa5.86□□□□□ -1.47
CSMD1-215ENST00000537824 FAM92AA1XBS5 289 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 SLC16A3O15427 465 aaKnown RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 CYP26A1O43174 497 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 SPRP35270 261 aaPredicted RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 ADD2P35612 726 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 ERVK-24P63145 666 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 PPIL6Q8IXY8 311 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 GUF1Q8N442 669 aaKnown RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 HDAC7Q8WUI4 952 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 OSCP1Q8WVF1 389 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 S100ZQ8WXG8 99 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 TATDN2Q93075 761 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 SMARCAD1Q9H4L7 1026 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 ING4Q9UNL4 249 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 SDK2Q58EX2 2172 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 A0A0G2JPF8 293 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 USP17L3A6NCW0 530 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 USP17L4A6NCW7 530 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 HNRNPCL3B7ZW38 293 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 KCNQ3O43525 872 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 H2AFYO75367 372 aaKnown RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 CCNKO75909 580 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 HNRNPCL4P0DMR1 293 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 ITGA4P13612 1032 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 USP10Q14694 798 aaKnown RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 TXNRD1Q16881 649 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 BROXQ5VW32 411 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 USP17L1Q7RTZ2 530 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 OTUD5Q96G74 571 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 PIGSQ96S52 555 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 SEPHS2Q99611 448 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 CDC42EP4Q9H3Q1 356 aaKnown RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 SAR1AQ9NR31 198 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 ZNF224Q9NZL3 707 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 ZNF221Q9UK13 617 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 HS6ST1O60243 411 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 HUS1O60921 280 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 USP12O75317 370 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 CIAO1O76071 339 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 ATG7O95352 703 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 FESP07332 822 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 DPYDQ12882 1025 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 TYSND1Q2T9J0 566 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 PGBD2Q6P3X8 592 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 TPTE2Q6XPS3 522 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 DHRSXQ8N5I4 330 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 ZBTB38Q8NAP3 1195 aaPredicted RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 PRDM15P57071 1507 aaPredicted RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 FREM1Q5H8C1 2179 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 TGM2P21980 687 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 ACLYP53396 1101 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 ARF5P84085 180 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms