RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 TMEM47Q9BQJ4 181 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 NEUROG2Q9H2A3 272 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 BARHL2Q9NY43 387 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 GRHL1Q9NZI5 618 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 XPO7Q9UIA9 1087 aaKnown RBP5.6□□□□□ -1.51
PTPRD-213ENST00000537002 TELO2Q9Y4R8 837 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 FAM205AQ6ZU69 1335 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 KCNQ2O43526 872 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 SERPINB5P36952 375 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 TUBA1BP68363 451 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 UBE3AQ05086 875 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 ALCAMQ13740 583 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 INPP5AQ14642 412 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 CLEC16AQ2KHT3 1053 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 KHDC1Q4VXA5 237 aaKnown RBP5.6□□□□□ -1.51
PTPRD-213ENST00000537002 TTC27Q6P3X3 843 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 LAYNQ6UX15 382 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 TUBA1AQ71U36 451 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 PEX5LQ8IYB4 626 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 DHX33Q9H6R0 707 aaKnown RBP5.6□□□□□ -1.51
PTPRD-213ENST00000537002 APEX2Q9UBZ4 518 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 SHOC2Q9UQ13 582 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 TBKBP1A7MCY6 615 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 CAMTA2O94983 1202 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 ZBTB7AO95365 584 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 FGRP09769 529 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 TYK2P29597 1187 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 VAMP7P51809 220 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 MECOMQ03112 1051 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 SF3B3Q15393 1217 aaKnown RBP5.6□□□□□ -1.51
PTPRD-213ENST00000537002 NKX2-3Q8TAU0 364 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 CADM1Q9BY67 442 aaKnown RBP5.6□□□□□ -1.51
PTPRD-213ENST00000537002 MTFR1LQ9H019 292 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 IP6K2Q9UHH9 426 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 CCPG1Q9ULG6 757 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 V9GYQ6 96 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 CNTNAP5Q8WYK1 1306 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 TJP1Q07157 1748 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 LRRIQ4A6NIV6 560 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 KRR1Q13601 381 aaKnown RBP5.6□□□□□ -1.51
PTPRD-213ENST00000537002 KIAA1841Q6NSI8 718 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 ZBTB33Q86T24 672 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 NIM1KQ8IY84 436 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 TTC13Q8NBP0 860 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 HM13Q8TCT9 377 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 CAPSLQ8WWF8 208 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 ACSF2Q96CM8 615 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-213ENST00000537002 GPR101Q96P66 508 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-213ENST00000537002 GANQ9H2C0 597 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 ARHGEF10LQ9HCE6 1279 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 NINJ2Q9NZG7 142 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 GTF3C4Q9UKN8 822 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 ADAMTSL3P82987 1691 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 TRIM49D1C9J1S8 452 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 USP17L15C9J2P7 530 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 USP17L13C9JLJ4 530 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 USP17L11C9JVI0 530 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 USP17L18D6R9N7 530 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 USP17L22D6RA61 530 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 USP17L17D6RBQ6 530 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 USP17L19D6RCP7 530 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 USP17L20D6RJB6 530 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 ADCY6O43306 1168 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 ALOX15P16050 662 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-213ENST00000537002 FLT3P36888 993 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 KPNA2P52292 529 aaKnown RBP5.6□□□□□ -1.51
PTPRD-213ENST00000537002 FOXO4P98177 505 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 USP17L24Q0WX57 530 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 PDK3Q15120 406 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 ZNF829Q3KNS6 432 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-213ENST00000537002 USP17L6PQ6QN14 398 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 ZDHHC24Q6UX98 284 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 NXF1Q9UBU9 619 aaKnown RBP5.6□□□□□ -1.51
PTPRD-213ENST00000537002 TPST1O60507 370 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 FOSP01100 380 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-213ENST00000537002 P4HA1P13674 534 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 PTPN2P17706 415 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 VCLP18206 1134 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 FUT2Q10981 343 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 PKN1Q16512 942 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 PKN2Q16513 984 aaKnown RBP5.6□□□□□ -1.51
PTPRD-213ENST00000537002 NFIL3Q16649 462 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 TRIM60Q495X7 471 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 RASSF5Q8WWW0 418 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 UTP4Q969X6 686 aaKnown RBP5.6□□□□□ -1.51
PTPRD-213ENST00000537002 PAFAH2Q99487 392 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 AMNQ9BXJ7 453 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 OSBPL6Q9BZF3 934 aa5.6□□□□□ -1.51
PTPRD-213ENST00000537002 C15orf38-AP3S2A0A0A6YYH1 394 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 C1orf232A0A0U1RR37 186 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 DCDC2CA8MYV0 355 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 CNOT3O75175 753 aaKnown RBP5.59□□□□□ -1.51
PTPRD-213ENST00000537002 RALAP11233 206 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 PRDX6P30041 224 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 HOXD12P35452 270 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 MAPK11Q15759 364 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 ACSBG2Q5FVE4 666 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 NIPAL1Q6NVV3 410 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 ARPINQ7Z6K5 226 aa5.59□□□□□ -1.51
PTPRD-213ENST00000537002 SDR16C5Q8N3Y7 309 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms