RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 TXNRD3NBQ6F5E7 133 aa14.21□□□□□ -0.13
SMG6-203ENST00000536871 OLFML1Q6UWY5 402 aa14.21□□□□□ -0.13
SMG6-203ENST00000536871 RFX6Q8HWS3 928 aa14.21□□□□□ -0.13
SMG6-203ENST00000536871 PPIL6Q8IXY8 311 aa14.21□□□□□ -0.13
SMG6-203ENST00000536871 EMC1Q8N766 993 aa14.21□□□□□ -0.13
SMG6-203ENST00000536871 ACTL9Q8TC94 416 aa14.21□□□□□ -0.13
SMG6-203ENST00000536871 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.21□□□□□ -0.13
SMG6-203ENST00000536871 P3H4Q92791 437 aa14.21□□□□□ -0.13
SMG6-203ENST00000536871 RBM15Q96T37 977 aaKnown RBP eCLIP14.21□□□□□ -0.13
SMG6-203ENST00000536871 NINJ2Q9NZG7 142 aa14.21□□□□□ -0.13
SMG6-203ENST00000536871 TUBGCP4Q9UGJ1 667 aa14.21□□□□□ -0.13
SMG6-203ENST00000536871 CITO14578 2027 aa14.21□□□□□ -0.14
SMG6-203ENST00000536871 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.21□□□□□ -0.14
SMG6-203ENST00000536871 ACSL3O95573 720 aa14.21□□□□□ -0.14
SMG6-203ENST00000536871 ZFXP17010 805 aaPredicted RBP14.21□□□□□ -0.14
SMG6-203ENST00000536871 WARSP23381 471 aaKnown RBP14.21□□□□□ -0.14
SMG6-203ENST00000536871 CHKAP35790 457 aa14.21□□□□□ -0.14
SMG6-203ENST00000536871 VPS41P49754 854 aa14.21□□□□□ -0.14
SMG6-203ENST00000536871 PSEN1P49768 467 aa14.21□□□□□ -0.14
SMG6-203ENST00000536871 GJA9P57773 515 aa14.21□□□□□ -0.14
SMG6-203ENST00000536871 SOWAHAQ2M3V2 549 aa14.21□□□□□ -0.14
SMG6-203ENST00000536871 TTC31Q49AM3 519 aaPredicted RBP14.21□□□□□ -0.14
SMG6-203ENST00000536871 PPP1R21Q6ZMI0 780 aa14.21□□□□□ -0.14
SMG6-203ENST00000536871 SLC26A9Q7LBE3 791 aa14.21□□□□□ -0.14
SMG6-203ENST00000536871 ACOT1Q86TX2 421 aa14.21□□□□□ -0.14
SMG6-203ENST00000536871 MYCBPAPQ8TBZ2 947 aa14.21□□□□□ -0.14
SMG6-203ENST00000536871 PPM1EQ8WY54 764 aa14.21□□□□□ -0.14
SMG6-203ENST00000536871 HAUS1Q96CS2 278 aa14.21□□□□□ -0.14
SMG6-203ENST00000536871 CCT8L2Q96SF2 557 aa14.21□□□□□ -0.14
SMG6-203ENST00000536871 CCDC134Q9H6E4 229 aa14.21□□□□□ -0.14
SMG6-203ENST00000536871 CDHR5Q9HBB8 845 aa14.21□□□□□ -0.14
SMG6-203ENST00000536871 TJP2Q9UDY2 1190 aa14.21□□□□□ -0.14
SMG6-203ENST00000536871 FETUBQ9UGM5 382 aa14.21□□□□□ -0.14
SMG6-203ENST00000536871 E7EVH7 732 aa14.2□□□□□ -0.14
SMG6-203ENST00000536871 PHBP35232 272 aa14.2□□□□□ -0.14
SMG6-203ENST00000536871 CCT5P48643 541 aa14.2□□□□□ -0.14
SMG6-203ENST00000536871 KRT81Q14533 505 aa14.2□□□□□ -0.14
SMG6-203ENST00000536871 EFHC1Q5JVL4 640 aa14.2□□□□□ -0.14
SMG6-203ENST00000536871 UBXN11Q5T124 520 aa14.2□□□□□ -0.14
SMG6-203ENST00000536871 ERMARDQ5T6L9 678 aa14.2□□□□□ -0.14
SMG6-203ENST00000536871 RNASEH2BQ5TBB1 312 aaKnown RBP14.2□□□□□ -0.14
SMG6-203ENST00000536871 TTC30AQ86WT1 665 aa14.2□□□□□ -0.14
SMG6-203ENST00000536871 TDRPQ86YL5 185 aa14.2□□□□□ -0.14
SMG6-203ENST00000536871 C10orf67Q8IYJ2 551 aa14.2□□□□□ -0.14
SMG6-203ENST00000536871 ZNF670Q9BS34 389 aa14.2□□□□□ -0.14
SMG6-203ENST00000536871 CALN1Q9BXU9 219 aa14.2□□□□□ -0.14
SMG6-203ENST00000536871 ADAM7Q9H2U9 754 aa14.2□□□□□ -0.14
SMG6-203ENST00000536871 UBN1Q9NPG3 1134 aa14.2□□□□□ -0.14
SMG6-203ENST00000536871 SENP1Q9P0U3 644 aa14.2□□□□□ -0.14
SMG6-203ENST00000536871 IPPQ9Y573 584 aa14.2□□□□□ -0.14
SMG6-203ENST00000536871 TRPV2Q9Y5S1 764 aa14.2□□□□□ -0.14
SMG6-203ENST00000536871 ALOX15BO15296 676 aa14.19□□□□□ -0.14
SMG6-203ENST00000536871 CDH6P55285 790 aa14.19□□□□□ -0.14
SMG6-203ENST00000536871 FCGRTP55899 365 aa14.19□□□□□ -0.14
SMG6-203ENST00000536871 ARL4CP56559 192 aa14.19□□□□□ -0.14
SMG6-203ENST00000536871 EIF3EP60228 445 aaKnown RBP14.19□□□□□ -0.14
SMG6-203ENST00000536871 MRPS6P82932 125 aaKnown RBP14.19□□□□□ -0.14
SMG6-203ENST00000536871 CBLBQ13191 982 aa14.19□□□□□ -0.14
SMG6-203ENST00000536871 KYNUQ16719 465 aa14.19□□□□□ -0.14
SMG6-203ENST00000536871 SMTNL2Q2TAL5 461 aa14.19□□□□□ -0.14
SMG6-203ENST00000536871 TWF2Q6IBS0 349 aaKnown RBP14.19□□□□□ -0.14
SMG6-203ENST00000536871 PMF1Q6P1K2 205 aa14.19□□□□□ -0.14
SMG6-203ENST00000536871 YTHDF3Q7Z739 585 aaKnown RBP14.19□□□□□ -0.14
SMG6-203ENST00000536871 SAPCD2Q86UD0 394 aa14.19□□□□□ -0.14
SMG6-203ENST00000536871 PSTKQ8IV42 348 aaKnown RBP14.19□□□□□ -0.14
SMG6-203ENST00000536871 C12orf29Q8N999 325 aa14.19□□□□□ -0.14
SMG6-203ENST00000536871 SPATA18Q8TC71 538 aa14.19□□□□□ -0.14
SMG6-203ENST00000536871 ZNF473Q8WTR7 871 aaKnown RBP14.19□□□□□ -0.14
SMG6-203ENST00000536871 HSPH1Q92598 858 aa14.19□□□□□ -0.14
SMG6-203ENST00000536871 C18orf25Q96B23 403 aaPredicted RBP14.19□□□□□ -0.14
SMG6-203ENST00000536871 XPO6Q96QU8 1125 aaKnown RBP14.19□□□□□ -0.14
SMG6-203ENST00000536871 UPF3AQ9H1J1 476 aaKnown RBP14.19□□□□□ -0.14
SMG6-203ENST00000536871 INTS9Q9NV88 658 aaKnown RBP14.19□□□□□ -0.14
SMG6-203ENST00000536871 PCSK1NQ9UHG2 260 aa14.19□□□□□ -0.14
SMG6-203ENST00000536871 ATP2A2P16615 1042 aaKnown RBP14.18□□□□□ -0.14
SMG6-203ENST00000536871 NOMO1Q15155 1222 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 CCL14Q16627 93 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 CCDC14Q49A88 953 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 KCNT1Q5JUK3 1230 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 TTC19Q6DKK2 380 aaPredicted RBP14.18□□□□□ -0.14
SMG6-203ENST00000536871 CNPY4Q8N129 248 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 TMEM86AQ8N2M4 240 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 EPS8L3Q8TE67 593 aaKnown RBP14.18□□□□□ -0.14
SMG6-203ENST00000536871 RNF157Q96PX1 679 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 TMEM121Q9BTD3 319 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 DDX23Q9BUQ8 820 aaKnown RBP14.18□□□□□ -0.14
SMG6-203ENST00000536871 NSRP1Q9H0G5 558 aaKnown RBP14.18□□□□□ -0.14
SMG6-203ENST00000536871 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.18□□□□□ -0.14
SMG6-203ENST00000536871 GTF2IRD1Q9UHL9 959 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 FARP1Q9Y4F1 1045 aaPredicted RBP14.18□□□□□ -0.14
SMG6-203ENST00000536871 C5orf60A6NFR6 353 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 XPO1O14980 1071 aaKnown RBP14.18□□□□□ -0.14
SMG6-203ENST00000536871 KIAA0754O94854 1291 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 ALDH1A1P00352 501 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 IFNB1P01574 187 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 RBP3P10745 1247 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 AKAP5P24588 427 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 ROR1Q01973 937 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 DPYSL3Q14195 570 aa14.18□□□□□ -0.14
SMG6-203ENST00000536871 HIF1AQ16665 826 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms