RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 HNRNPABQ99729 332 aaKnown RBP15.13■□□□□ 0.01
UBE3B-206ENST00000536398 SRRTQ9BXP5 876 aaKnown RBP15.13■□□□□ 0.01
UBE3B-206ENST00000536398 OSBPL6Q9BZF3 934 aa15.13■□□□□ 0.01
UBE3B-206ENST00000536398 EBF3Q9H4W6 596 aa15.13■□□□□ 0.01
UBE3B-206ENST00000536398 DMAP1Q9NPF5 467 aaPredicted RBP15.13■□□□□ 0.01
UBE3B-206ENST00000536398 HPS4Q9NQG7 708 aa15.13■□□□□ 0.01
UBE3B-206ENST00000536398 CISHQ9NSE2 258 aa15.13■□□□□ 0.01
UBE3B-206ENST00000536398 THG1LQ9NWX6 298 aaKnown RBP15.13■□□□□ 0.01
UBE3B-206ENST00000536398 F5P12259 2224 aa15.13■□□□□ 0.01
UBE3B-206ENST00000536398 ATP8B3O60423 1300 aa15.13■□□□□ 0.01
UBE3B-206ENST00000536398 CACNA1HO95180 2353 aa15.12■□□□□ 0.01
UBE3B-206ENST00000536398 SPECC1L-ADORA2AF8WAN1 911 aa15.12■□□□□ 0.01
UBE3B-206ENST00000536398 MAN2B1O00754 1011 aa15.12■□□□□ 0.01
UBE3B-206ENST00000536398 CTHP32929 405 aa15.12■□□□□ 0.01
UBE3B-206ENST00000536398 PPP1R2P41236 205 aa15.12■□□□□ 0.01
UBE3B-206ENST00000536398 FMO5P49326 533 aa15.12■□□□□ 0.01
UBE3B-206ENST00000536398 RAD23BP54727 409 aa15.12■□□□□ 0.01
UBE3B-206ENST00000536398 ZNF77Q15935 545 aa15.12■□□□□ 0.01
UBE3B-206ENST00000536398 PPP1R26Q5T8A7 1209 aaPredicted RBP15.12■□□□□ 0.01
UBE3B-206ENST00000536398 GPRIN1Q7Z2K8 1008 aa15.12■□□□□ 0.01
UBE3B-206ENST00000536398 C1orf210Q8IVY1 113 aa15.12■□□□□ 0.01
UBE3B-206ENST00000536398 SLC4A11Q8NBS3 891 aa15.12■□□□□ 0.01
UBE3B-206ENST00000536398 SH3RF2Q8TEC5 729 aa15.12■□□□□ 0.01
UBE3B-206ENST00000536398 JAKMIP2Q96AA8 810 aa15.12■□□□□ 0.01
UBE3B-206ENST00000536398 CHFRQ96EP1 664 aa15.12■□□□□ 0.01
UBE3B-206ENST00000536398 HEXIM2Q96MH2 286 aaKnown RBP15.12■□□□□ 0.01
UBE3B-206ENST00000536398 NELL2Q99435 816 aa15.12■□□□□ 0.01
UBE3B-206ENST00000536398 CLSTN2Q9H4D0 955 aa15.12■□□□□ 0.01
UBE3B-206ENST00000536398 LMAN1LQ9HAT1 526 aa15.12■□□□□ 0.01
UBE3B-206ENST00000536398 METTL14Q9HCE5 456 aaKnown RBP15.12■□□□□ 0.01
UBE3B-206ENST00000536398 CSNK1G1Q9HCP0 422 aa15.12■□□□□ 0.01
UBE3B-206ENST00000536398 SPATA6Q9NWH7 488 aaPredicted RBP15.12■□□□□ 0.01
UBE3B-206ENST00000536398 IL37Q9NZH6 218 aa15.12■□□□□ 0.01
UBE3B-206ENST00000536398 GMIPQ9P107 970 aa15.12■□□□□ 0.01
UBE3B-206ENST00000536398 USP34Q70CQ2 3546 aa15.12■□□□□ 0.01
UBE3B-206ENST00000536398 VPS13AQ96RL7 3174 aa15.12■□□□□ 0.01
UBE3B-206ENST00000536398 BICDL2A1A5D9 508 aa15.11■□□□□ 0.01
UBE3B-206ENST00000536398 HHLA1C9JL84 531 aa15.11■□□□□ 0.01
UBE3B-206ENST00000536398 SCAMP3O14828 347 aaKnown RBP15.11■□□□□ 0.01
UBE3B-206ENST00000536398 OAS1P00973 400 aaKnown RBP15.11■□□□□ 0.01
UBE3B-206ENST00000536398 HOXD11P31277 338 aaPredicted RBP15.11■□□□□ 0.01
UBE3B-206ENST00000536398 MRE11P49959 708 aa15.11■□□□□ 0.01
UBE3B-206ENST00000536398 PLCB2Q00722 1185 aa15.11■□□□□ 0.01
UBE3B-206ENST00000536398 USP4Q13107 963 aa15.11■□□□□ 0.01
UBE3B-206ENST00000536398 MTF1Q14872 753 aa15.11■□□□□ 0.01
UBE3B-206ENST00000536398 PON2Q15165 354 aa15.11■□□□□ 0.01
UBE3B-206ENST00000536398 ITPRIPL2Q3MIP1 535 aa15.11■□□□□ 0.01
UBE3B-206ENST00000536398 NAIF1Q69YI7 327 aaPredicted RBP15.11■□□□□ 0.01
UBE3B-206ENST00000536398 CLEC20AQ6ZU45 233 aa15.11■□□□□ 0.01
UBE3B-206ENST00000536398 TRIML1Q8N9V2 468 aa15.11■□□□□ 0.01
UBE3B-206ENST00000536398 FBXO32Q969P5 355 aa15.11■□□□□ 0.01
UBE3B-206ENST00000536398 SLITRK1Q96PX8 696 aa15.11■□□□□ 0.01
UBE3B-206ENST00000536398 LINC00597Q9H2U6 94 aa15.11■□□□□ 0.01
UBE3B-206ENST00000536398 C8orf33Q9H7E9 229 aaPredicted RBP15.11■□□□□ 0.01
UBE3B-206ENST00000536398 KIF9Q9HAQ2 790 aa15.11■□□□□ 0.01
UBE3B-206ENST00000536398 RBM12Q9NTZ6 932 aaKnown RBP15.11■□□□□ 0.01
UBE3B-206ENST00000536398 LMBRD1Q9NUN5 540 aa15.11■□□□□ 0.01
UBE3B-206ENST00000536398 SMPD4Q9NXE4 827 aa15.11■□□□□ 0.01
UBE3B-206ENST00000536398 EHD2Q9NZN4 543 aa15.11■□□□□ 0.01
UBE3B-206ENST00000536398 ARHGAP26Q9UNA1 814 aa15.11■□□□□ 0.01
UBE3B-206ENST00000536398 MRPS17Q9Y2R5 130 aaKnown RBP15.11■□□□□ 0.01
UBE3B-206ENST00000536398 WNT6Q9Y6F9 365 aa15.11■□□□□ 0.01
UBE3B-206ENST00000536398 ANAPC1Q9H1A4 1944 aa15.11■□□□□ 0.01
UBE3B-206ENST00000536398 LEFTY2O00292 366 aa15.1■□□□□ 0.01
UBE3B-206ENST00000536398 RTN3O95197 1032 aaPredicted RBP15.1■□□□□ 0.01
UBE3B-206ENST00000536398 FAM200BP0CF97 657 aa15.1■□□□□ 0.01
UBE3B-206ENST00000536398 CHRNB1P11230 501 aa15.1■□□□□ 0.01
UBE3B-206ENST00000536398 PPP3CCP48454 512 aa15.1■□□□□ 0.01
UBE3B-206ENST00000536398 MLLT6P55198 1093 aaPredicted RBP15.1■□□□□ 0.01
UBE3B-206ENST00000536398 MTAPQ13126 283 aa15.1■□□□□ 0.01
UBE3B-206ENST00000536398 CUL2Q13617 745 aa15.1■□□□□ 0.01
UBE3B-206ENST00000536398 RUNX3Q13761 415 aa15.1■□□□□ 0.01
UBE3B-206ENST00000536398 CC2D1AQ6P1N0 951 aaPredicted RBP15.1■□□□□ 0.01
UBE3B-206ENST00000536398 FOXR2Q6PJQ5 311 aa15.1■□□□□ 0.01
UBE3B-206ENST00000536398 CLEC17AQ6ZS10 378 aa15.1■□□□□ 0.01
UBE3B-206ENST00000536398 LMO3Q8TAP4 145 aa15.1■□□□□ 0.01
UBE3B-206ENST00000536398 TMEM176AQ96HP8 235 aa15.1■□□□□ 0.01
UBE3B-206ENST00000536398 IRF2BPLQ9H1B7 796 aa15.1■□□□□ 0.01
UBE3B-206ENST00000536398 CCSER2Q9H7U1 834 aa15.1■□□□□ 0.01
UBE3B-206ENST00000536398 DUS2Q9NX74 493 aaKnown RBP15.1■□□□□ 0.01
UBE3B-206ENST00000536398 CPQQ9Y646 472 aa15.1■□□□□ 0.01
UBE3B-206ENST00000536398 CACNA1IQ9P0X4 2223 aa15.09■□□□□ 0.01
UBE3B-206ENST00000536398 FAM92AA1XBS5 289 aa15.09■□□□□ 0.01
UBE3B-206ENST00000536398 OLFM2O95897 454 aa15.09■□□□□ 0.01
UBE3B-206ENST00000536398 ZDHHC11BP0C7U3 371 aa15.09■□□□□ 0.01
UBE3B-206ENST00000536398 SP9P0CG40 484 aa15.09■□□□□ 0.01
UBE3B-206ENST00000536398 RPS9P46781 194 aaKnown RBP15.09■□□□□ 0.01
UBE3B-206ENST00000536398 SLC7A9P82251 487 aa15.09■□□□□ 0.01
UBE3B-206ENST00000536398 GAS6Q14393 721 aa15.09■□□□□ 0.01
UBE3B-206ENST00000536398 TSSK4Q6SA08 328 aa15.09■□□□□ 0.01
UBE3B-206ENST00000536398 RALGPS2Q86X27 583 aaPredicted RBP15.09■□□□□ 0.01
UBE3B-206ENST00000536398 TRIM59Q8IWR1 403 aa15.09■□□□□ 0.01
UBE3B-206ENST00000536398 UBR7Q8N806 425 aa15.09■□□□□ 0.01
UBE3B-206ENST00000536398 OSCP1Q8WVF1 389 aa15.09■□□□□ 0.01
UBE3B-206ENST00000536398 KAT5Q92993 513 aa15.09■□□□□ 0.01
UBE3B-206ENST00000536398 FAXDC2Q96IV6 333 aa15.09■□□□□ 0.01
UBE3B-206ENST00000536398 DUSP16Q9BY84 665 aa15.09■□□□□ 0.01
UBE3B-206ENST00000536398 FBRSL1Q9HCM7 1045 aaKnown RBP15.09■□□□□ 0.01
UBE3B-206ENST00000536398 RWDD2AQ9UIY3 292 aa15.09■□□□□ 0.01
UBE3B-206ENST00000536398 ZNF638Q14966 1978 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms