RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 BCKDHBP21953 392 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 EIF2DP41214 584 aaKnown RBP13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 ATXN3P54252 364 aaPredicted RBP13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 USP46P62068 366 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 NOP14P78316 857 aaKnown RBP13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 SLC7A9P82251 487 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 KDSRQ06136 332 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 TRPC3Q13507 836 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 DHCR24Q15392 516 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 TRIM61Q5EBN2 209 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 BTBD8Q5XKL5 378 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 CBWD2Q8IUF1 395 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 ALLCQ8N6M5 410 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 PDILTQ8N807 584 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 KIAA1958Q8N8K9 716 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 TXNDC5Q8NBS9 432 aaKnown RBP13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 PDZD8Q8NEN9 1154 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 OR5B17Q8NGF7 314 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 CXorf38Q8TB03 319 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 C8orf48Q96LL4 319 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 TTLL2Q9BWV7 592 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 NACA2Q9H009 215 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 ARHGEF4Q9NR80 690 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 HSPBP1Q9NZL4 362 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 CFAP97Q9P2B7 532 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 TBC1D14Q9P2M4 693 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 SH3BP1Q9Y3L3 701 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 ZNF840PA6NDX5 716 aa13.81□□□□□ -0.2
TNFRSF1A-207ENST00000535958 A8MXQ7 604 aa13.81□□□□□ -0.2
TNFRSF1A-207ENST00000535958 SCAMP3O14828 347 aaKnown RBP13.81□□□□□ -0.2
TNFRSF1A-207ENST00000535958 GIPC1O14908 333 aa13.81□□□□□ -0.2
TNFRSF1A-207ENST00000535958 ZBTB24O43167 697 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF1A-207ENST00000535958 RTN3O95197 1032 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF1A-207ENST00000535958 KAT7O95251 611 aa13.81□□□□□ -0.2
TNFRSF1A-207ENST00000535958 CSRP1P21291 193 aaKnown RBP13.81□□□□□ -0.2
TNFRSF1A-207ENST00000535958 GNL1P36915 607 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF1A-207ENST00000535958 GRIA2P42262 883 aa13.81□□□□□ -0.2
TNFRSF1A-207ENST00000535958 MAPK8P45983 427 aa13.81□□□□□ -0.2
TNFRSF1A-207ENST00000535958 AMPD3Q01432 767 aa13.81□□□□□ -0.2
TNFRSF1A-207ENST00000535958 TAF10Q12962 218 aa13.81□□□□□ -0.2
TNFRSF1A-207ENST00000535958 LYSMD4Q5XG99 296 aa13.81□□□□□ -0.2
TNFRSF1A-207ENST00000535958 TRAPPC11Q7Z392 1133 aa13.81□□□□□ -0.2
TNFRSF1A-207ENST00000535958 TRMT11Q7Z4G4 463 aaKnown RBP13.81□□□□□ -0.2
TNFRSF1A-207ENST00000535958 HMGB4Q8WW32 186 aa13.81□□□□□ -0.2
TNFRSF1A-207ENST00000535958 FBXO32Q969P5 355 aa13.81□□□□□ -0.2
TNFRSF1A-207ENST00000535958 FGFBP2Q9BYJ0 223 aa13.81□□□□□ -0.2
TNFRSF1A-207ENST00000535958 ADAM33Q9BZ11 813 aa13.81□□□□□ -0.2
TNFRSF1A-207ENST00000535958 TNMDQ9H2S6 317 aa13.81□□□□□ -0.2
TNFRSF1A-207ENST00000535958 EVLQ9UI08 416 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF1A-207ENST00000535958 PTPRJQ12913 1337 aa13.81□□□□□ -0.2
TNFRSF1A-207ENST00000535958 TCRBV21S2A2A0A5A6 115 aa13.8□□□□□ -0.2
TNFRSF1A-207ENST00000535958 TMEM8BA6NDV4 472 aa13.8□□□□□ -0.2
TNFRSF1A-207ENST00000535958 C1QTNF9BB2RNN3 333 aa13.8□□□□□ -0.2
TNFRSF1A-207ENST00000535958 PATE3B3GLJ2 98 aa13.8□□□□□ -0.2
TNFRSF1A-207ENST00000535958 PHACTR2O75167 634 aa13.8□□□□□ -0.2
TNFRSF1A-207ENST00000535958 TACC1O75410 805 aa13.8□□□□□ -0.2
TNFRSF1A-207ENST00000535958 C1QTNF9P0C862 333 aa13.8□□□□□ -0.2
TNFRSF1A-207ENST00000535958 YWHAQP27348 245 aa13.8□□□□□ -0.2
TNFRSF1A-207ENST00000535958 ASIC1P78348 528 aa13.8□□□□□ -0.2
TNFRSF1A-207ENST00000535958 GAD2Q05329 585 aa13.8□□□□□ -0.2
TNFRSF1A-207ENST00000535958 SNRNP35Q16560 246 aaKnown RBP13.8□□□□□ -0.2
TNFRSF1A-207ENST00000535958 WDR72Q3MJ13 1102 aa13.8□□□□□ -0.2
TNFRSF1A-207ENST00000535958 RDH13Q8NBN7 331 aa13.8□□□□□ -0.2
TNFRSF1A-207ENST00000535958 DEFB124Q8NES8 71 aa13.8□□□□□ -0.2
TNFRSF1A-207ENST00000535958 RLN3Q8WXF3 142 aa13.8□□□□□ -0.2
TNFRSF1A-207ENST00000535958 MRPL45Q9BRJ2 306 aaKnown RBP13.8□□□□□ -0.2
TNFRSF1A-207ENST00000535958 MED10Q9BTT4 135 aa13.8□□□□□ -0.2
TNFRSF1A-207ENST00000535958 CEP295Q9C0D2 2601 aa13.8□□□□□ -0.2
TNFRSF1A-207ENST00000535958 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 TBC1D3BA6NDS4 549 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 SGK1O00141 431 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 TNFRSF10BO14763 440 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 EIF3DO15371 548 aaKnown RBP eCLIP13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 AP5Z1O43299 807 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 OAS1P00973 400 aaKnown RBP13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 CFIP05156 583 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 PTPN1P18031 435 aaKnown RBP13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 RDXP35241 583 aaKnown RBP13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 P2RY2P41231 377 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 TNFRSF4P43489 277 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 SLC6A11P48066 632 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 CYP2J2P51589 502 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 IRX4P78413 519 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 STK38Q15208 465 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 SCARA3Q6AZY7 606 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 TMEM92Q6UXU6 159 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 LIMS2Q7Z4I7 341 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 SYT12Q8IV01 421 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 TMEFF1Q8IYR6 380 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 ADGRG2Q8IZP9 1017 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 NUP93Q8N1F7 819 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 HDDC3Q8N4P3 179 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 IL17RCQ8NAC3 791 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 OVCA2Q8WZ82 227 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 CCDC127Q96BQ5 260 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 OTUB2Q96DC9 234 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 CGRRF1Q99675 332 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 RNF38Q9H0F5 515 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 NXF1Q9UBU9 619 aaKnown RBP13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 ZMIZ1Q9ULJ6 1067 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms