RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 RUNX3Q13761 415 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 NCOA4Q13772 614 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 CCINQ13939 588 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 GAS6Q14393 721 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 PPP2R5DQ14738 602 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 PDGFRLQ15198 375 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 ZNF77Q15935 545 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 SGSM1Q2NKQ1 1148 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 ZNF667Q5HYK9 610 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 WDR44Q5JSH3 913 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 TXNDC11Q6PKC3 985 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 DENND5BQ6ZUT9 1274 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 SCN4BQ8IWT1 228 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 OR6B3Q8NGW1 331 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 CCDC34Q96HJ3 373 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 CHAMP1Q96JM3 812 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 ZFYVE19Q96K21 471 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 ELOVL4Q9GZR5 314 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 HPS4Q9NQG7 708 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 ARHGAP26Q9UNA1 814 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 MAGED2Q9UNF1 606 aaPredicted RBP11.5□□□□□ -0.57
CCDC60-202ENST00000535685 CCL26Q9Y258 94 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 KIAA1549LQ6ZVL6 1849 aa11.5□□□□□ -0.57
CCDC60-202ENST00000535685 DMXL1Q9Y485 3027 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 A8MXQ7 604 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 PHACTR2O75167 634 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 AP1G2O75843 785 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 OLFM2O95897 454 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 ASS1P00966 412 aaKnown RBP11.49□□□□□ -0.57
CCDC60-202ENST00000535685 P4HA1P13674 534 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 ANXA13P27216 316 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 GRIK1P39086 918 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 CXCL12P48061 93 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 AMPD2Q01433 879 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 BIRC3Q13489 604 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 ZNF699Q32M78 642 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 ZCWPW2Q504Y3 356 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 MDH1BQ5I0G3 518 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 C1orf220Q5T0J3 134 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 SV2AQ7L0J3 742 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 UNC93AQ86WB7 457 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 CRYBG2Q8N1P7 616 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 B3GALNT2Q8NCR0 500 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 STKLD1Q8NE28 680 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 RIN3Q8TB24 985 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 ATRIPQ8WXE1 791 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 OVCA2Q8WZ82 227 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 FAXDC2Q96IV6 333 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 TNIP3Q96KP6 325 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 B3GNT5Q9BYG0 378 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 SMG9Q9H0W8 520 aaKnown RBP11.49□□□□□ -0.57
CCDC60-202ENST00000535685 EPC1Q9H2F5 836 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 GOLPH3LQ9H4A5 285 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 COMMD8Q9NX08 183 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 IL37Q9NZH6 218 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 FRMD4BQ9Y2L6 1034 aa11.49□□□□□ -0.57
CCDC60-202ENST00000535685 EML5Q05BV3 1969 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 ZNF840PA6NDX5 716 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 F8VP50 259 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 HDCP19113 662 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 RPL13P26373 211 aaKnown RBP11.48□□□□□ -0.57
CCDC60-202ENST00000535685 SOX9P48436 509 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 VAMP7P51809 220 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 DLG4P78352 724 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 NUCB2P80303 420 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 SLC7A9P82251 487 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 CYP27A1Q02318 531 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 TNK2Q07912 1038 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 BECN1Q14457 450 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 MTF1Q14872 753 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 EDRF1Q3B7T1 1238 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 COBLL1Q53SF7 1204 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 TMEM196Q5HYL7 178 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 SNX30Q5VWJ9 437 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 CC2D1AQ6P1N0 951 aaPredicted RBP11.48□□□□□ -0.57
CCDC60-202ENST00000535685 INTS8Q75QN2 995 aaKnown RBP11.48□□□□□ -0.57
CCDC60-202ENST00000535685 LAPTM4BQ86VI4 370 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 OSCP1Q8WVF1 389 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 RUBCNQ92622 972 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 EXOC4Q96A65 974 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 CHFRQ96EP1 664 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 SLC22A12Q96S37 553 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 DUSP9Q99956 384 aaKnown RBP11.48□□□□□ -0.57
CCDC60-202ENST00000535685 DPEP3Q9H4B8 488 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 SMYD3Q9H7B4 428 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 TMEM30AQ9NV96 361 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 TRPM5Q9NZQ8 1165 aa11.48□□□□□ -0.57
CCDC60-202ENST00000535685 NXF1Q9UBU9 619 aaKnown RBP11.48□□□□□ -0.57
CCDC60-202ENST00000535685 CNOT1A5YKK6 2376 aaKnown RBP11.48□□□□□ -0.57
CCDC60-202ENST00000535685 DCHS1Q96JQ0 3298 aa11.47□□□□□ -0.57
CCDC60-202ENST00000535685 ATP8B3O60423 1300 aa11.47□□□□□ -0.57
CCDC60-202ENST00000535685 FAM92AA1XBS5 289 aa11.47□□□□□ -0.57
CCDC60-202ENST00000535685 C2orf78A6NCI8 922 aa11.47□□□□□ -0.57
CCDC60-202ENST00000535685 OTOL1A6NHN0 477 aaPredicted RBP11.47□□□□□ -0.57
CCDC60-202ENST00000535685 AKAP3O75969 853 aa11.47□□□□□ -0.57
CCDC60-202ENST00000535685 RTN3O95197 1032 aaPredicted RBP11.47□□□□□ -0.57
CCDC60-202ENST00000535685 CKMP06732 381 aa11.47□□□□□ -0.57
CCDC60-202ENST00000535685 NR2F2P24468 414 aa11.47□□□□□ -0.57
CCDC60-202ENST00000535685 GTF2H1P32780 548 aa11.47□□□□□ -0.57
CCDC60-202ENST00000535685 CNR2P34972 360 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms