RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 RFC1P35251 1148 aaPredicted RBP24.09■■□□□ 1.45
RBFOX1-206ENST00000535565 MAGEA11P43364 429 aa24.09■■□□□ 1.45
RBFOX1-206ENST00000535565 TKTL1P51854 596 aa24.09■■□□□ 1.45
RBFOX1-206ENST00000535565 PIGHQ14442 188 aaPredicted RBP24.09■■□□□ 1.45
RBFOX1-206ENST00000535565 PTPROQ16827 1216 aa24.09■■□□□ 1.45
RBFOX1-206ENST00000535565 RAB41Q5JT25 222 aa24.09■■□□□ 1.45
RBFOX1-206ENST00000535565 RSPO2Q6UXX9 243 aaPredicted RBP24.09■■□□□ 1.45
RBFOX1-206ENST00000535565 FNIP1Q8TF40 1166 aa24.09■■□□□ 1.45
RBFOX1-206ENST00000535565 PGLYRP2Q96PD5 576 aa24.09■■□□□ 1.45
RBFOX1-206ENST00000535565 PACSIN2Q9UNF0 486 aaPredicted RBP24.09■■□□□ 1.45
RBFOX1-206ENST00000535565 GBF1Q92538 1859 aa24.09■■□□□ 1.45
RBFOX1-206ENST00000535565 MIF4GDA9UHW6 222 aaKnown RBP24.08■■□□□ 1.45
RBFOX1-206ENST00000535565 F8VP50 259 aa24.08■■□□□ 1.45
RBFOX1-206ENST00000535565 TRIM66O15016 1216 aa24.08■■□□□ 1.45
RBFOX1-206ENST00000535565 PRLRP16471 622 aa24.08■■□□□ 1.45
RBFOX1-206ENST00000535565 TCP1P17987 556 aaKnown RBP24.08■■□□□ 1.45
RBFOX1-206ENST00000535565 MAN1A1P33908 653 aa24.08■■□□□ 1.45
RBFOX1-206ENST00000535565 EFHC1Q5JVL4 640 aa24.08■■□□□ 1.45
RBFOX1-206ENST00000535565 C9orf50Q5SZB4 431 aa24.08■■□□□ 1.45
RBFOX1-206ENST00000535565 GPR65Q8IYL9 337 aa24.08■■□□□ 1.45
RBFOX1-206ENST00000535565 JOSD2Q8TAC2 188 aa24.08■■□□□ 1.45
RBFOX1-206ENST00000535565 SSX2IPQ9Y2D8 614 aa24.08■■□□□ 1.45
RBFOX1-206ENST00000535565 LCHNA4D1U4 455 aa24.08■■□□□ 1.44
RBFOX1-206ENST00000535565 MTMR11A4FU01 709 aa24.08■■□□□ 1.44
RBFOX1-206ENST00000535565 HHLA1C9JL84 531 aa24.08■■□□□ 1.44
RBFOX1-206ENST00000535565 SART1O43290 800 aaKnown RBP24.08■■□□□ 1.44
RBFOX1-206ENST00000535565 DESP17661 470 aa24.08■■□□□ 1.44
RBFOX1-206ENST00000535565 CTNNB1P35222 781 aa24.08■■□□□ 1.44
RBFOX1-206ENST00000535565 RNASE9P60153 205 aaKnown RBP24.08■■□□□ 1.44
RBFOX1-206ENST00000535565 AMPD2Q01433 879 aa24.08■■□□□ 1.44
RBFOX1-206ENST00000535565 CREMQ03060 361 aa24.08■■□□□ 1.44
RBFOX1-206ENST00000535565 SLC26A9Q7LBE3 791 aa24.08■■□□□ 1.44
RBFOX1-206ENST00000535565 SCN4BQ8IWT1 228 aa24.08■■□□□ 1.44
RBFOX1-206ENST00000535565 UBL4BQ8N7F7 174 aa24.08■■□□□ 1.44
RBFOX1-206ENST00000535565 KLHL23Q8NBE8 558 aa24.08■■□□□ 1.44
RBFOX1-206ENST00000535565 HES6Q96HZ4 224 aa24.08■■□□□ 1.44
RBFOX1-206ENST00000535565 PIWIL1Q96J94 861 aaKnown RBP24.08■■□□□ 1.44
RBFOX1-206ENST00000535565 CNGB3Q9NQW8 809 aa24.08■■□□□ 1.44
RBFOX1-206ENST00000535565 MRPL17Q9NRX2 175 aaKnown RBP24.08■■□□□ 1.44
RBFOX1-206ENST00000535565 TMEM59LQ9UK28 342 aa24.08■■□□□ 1.44
RBFOX1-206ENST00000535565 PSMA2P25787 234 aa24.07■■□□□ 1.44
RBFOX1-206ENST00000535565 OR1D2P34982 312 aa24.07■■□□□ 1.44
RBFOX1-206ENST00000535565 BMPR1AP36894 532 aa24.07■■□□□ 1.44
RBFOX1-206ENST00000535565 DNA2P51530 1060 aa24.07■■□□□ 1.44
RBFOX1-206ENST00000535565 MRPS5P82675 430 aaKnown RBP24.07■■□□□ 1.44
RBFOX1-206ENST00000535565 ROR1Q01973 937 aa24.07■■□□□ 1.44
RBFOX1-206ENST00000535565 RNF19BQ6ZMZ0 732 aa24.07■■□□□ 1.44
RBFOX1-206ENST00000535565 EMC1Q8N766 993 aa24.07■■□□□ 1.44
RBFOX1-206ENST00000535565 NIPA2Q8N8Q9 360 aa24.07■■□□□ 1.44
RBFOX1-206ENST00000535565 ATAD1Q8NBU5 361 aa24.07■■□□□ 1.44
RBFOX1-206ENST00000535565 CLEC4CQ8WTT0 213 aa24.07■■□□□ 1.44
RBFOX1-206ENST00000535565 C8orf48Q96LL4 319 aa24.07■■□□□ 1.44
RBFOX1-206ENST00000535565 OSBPL9Q96SU4 736 aa24.07■■□□□ 1.44
RBFOX1-206ENST00000535565 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.07■■□□□ 1.44
RBFOX1-206ENST00000535565 CDC23Q9UJX2 597 aa24.07■■□□□ 1.44
RBFOX1-206ENST00000535565 MRFAP1Q9Y605 127 aa24.07■■□□□ 1.44
RBFOX1-206ENST00000535565 GRAP2O75791 330 aa24.06■■□□□ 1.44
RBFOX1-206ENST00000535565 RPL17P18621 184 aaKnown RBP24.06■■□□□ 1.44
RBFOX1-206ENST00000535565 GPD1P21695 349 aa24.06■■□□□ 1.44
RBFOX1-206ENST00000535565 RABGGTBP53611 331 aa24.06■■□□□ 1.44
RBFOX1-206ENST00000535565 SHHQ15465 462 aa24.06■■□□□ 1.44
RBFOX1-206ENST00000535565 ARCQ7LC44 396 aa24.06■■□□□ 1.44
RBFOX1-206ENST00000535565 GPRIN1Q7Z2K8 1008 aa24.06■■□□□ 1.44
RBFOX1-206ENST00000535565 PLVAPQ9BX97 442 aa24.06■■□□□ 1.44
RBFOX1-206ENST00000535565 ULBP1Q9BZM6 244 aa24.06■■□□□ 1.44
RBFOX1-206ENST00000535565 MYO16Q9Y6X6 1858 aa24.06■■□□□ 1.44
RBFOX1-206ENST00000535565 WDR27A2RRH5 827 aa24.05■■□□□ 1.44
RBFOX1-206ENST00000535565 LINC01553A4QN01 128 aa24.05■■□□□ 1.44
RBFOX1-206ENST00000535565 HSF2BPO75031 334 aa24.05■■□□□ 1.44
RBFOX1-206ENST00000535565 DNAJB2P25686 324 aa24.05■■□□□ 1.44
RBFOX1-206ENST00000535565 OGDHQ02218 1023 aa24.05■■□□□ 1.44
RBFOX1-206ENST00000535565 ADCY1Q08828 1119 aa24.05■■□□□ 1.44
RBFOX1-206ENST00000535565 ZNF252P-AS1Q0IIN9 211 aa24.05■■□□□ 1.44
RBFOX1-206ENST00000535565 ACAP1Q15027 740 aa24.05■■□□□ 1.44
RBFOX1-206ENST00000535565 CLSTN3Q9BQT9 956 aa24.05■■□□□ 1.44
RBFOX1-206ENST00000535565 ZBP1Q9H171 429 aa24.05■■□□□ 1.44
RBFOX1-206ENST00000535565 ASNSD1Q9NWL6 643 aa24.05■■□□□ 1.44
RBFOX1-206ENST00000535565 LZTS1Q9Y250 596 aa24.05■■□□□ 1.44
RBFOX1-206ENST00000535565 CCDC66A2RUB6 948 aa24.04■■□□□ 1.44
RBFOX1-206ENST00000535565 C2CD4BA6NLJ0 364 aa24.04■■□□□ 1.44
RBFOX1-206ENST00000535565 ZBED1O96006 694 aa24.04■■□□□ 1.44
RBFOX1-206ENST00000535565 GLI1P08151 1106 aa24.04■■□□□ 1.44
RBFOX1-206ENST00000535565 CTSAP10619 480 aa24.04■■□□□ 1.44
RBFOX1-206ENST00000535565 PDGFRAP16234 1089 aa24.04■■□□□ 1.44
RBFOX1-206ENST00000535565 NDUFV1P49821 464 aa24.04■■□□□ 1.44
RBFOX1-206ENST00000535565 ZNF143P52747 638 aaPredicted RBP24.04■■□□□ 1.44
RBFOX1-206ENST00000535565 SCML4Q8N228 414 aa24.04■■□□□ 1.44
RBFOX1-206ENST00000535565 RXFP2Q8WXD0 754 aa24.04■■□□□ 1.44
RBFOX1-206ENST00000535565 FAM149B1Q96BN6 582 aa24.04■■□□□ 1.44
RBFOX1-206ENST00000535565 PSMB7Q99436 277 aa24.04■■□□□ 1.44
RBFOX1-206ENST00000535565 L2HGDHQ9H9P8 463 aa24.04■■□□□ 1.44
RBFOX1-206ENST00000535565 FNIP2Q9P278 1114 aa24.04■■□□□ 1.44
RBFOX1-206ENST00000535565 USTQ9Y2C2 406 aa24.04■■□□□ 1.44
RBFOX1-206ENST00000535565 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.04■■□□□ 1.44
RBFOX1-206ENST00000535565 KCNK3O14649 394 aa24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 ADAM12O43184 909 aa24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 RNF8O76064 485 aa24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 CTNNA2P26232 953 aa24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 SDC4P31431 198 aa24.03■■□□□ 1.44
RBFOX1-206ENST00000535565 CTNNA1P35221 906 aaKnown RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms