RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 PRPHP41219 470 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 PNPLA4P41247 253 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 MAGEA11P43364 429 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 ACOT2P49753 483 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 TOB1P50616 345 aaPredicted RBP8.36□□□□□ -1.07
NXF1-215ENST00000533440 ANAPC15P60006 121 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 ATP2C1P98194 919 aaPredicted RBP8.36□□□□□ -1.07
NXF1-215ENST00000533440 MYL7Q01449 175 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 C19orf57Q0VDD7 668 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 RESTQ13127 1097 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 CCDC142Q17RM4 750 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 TRMT11Q7Z4G4 463 aaKnown RBP8.36□□□□□ -1.07
NXF1-215ENST00000533440 NT5DC4Q86YG4 428 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 TMEM86AQ8N2M4 240 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 TRIML1Q8N9V2 468 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 FBXO18Q8NFZ0 1043 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 ZNF419Q96HQ0 510 aaPredicted RBP8.36□□□□□ -1.07
NXF1-215ENST00000533440 C8orf76Q96K31 380 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 SPATA17Q96L03 361 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 CEP295NLQ96MC4 621 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 ZNF560Q96MR9 790 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 UBL7Q96S82 380 aaPredicted RBP8.36□□□□□ -1.07
NXF1-215ENST00000533440 FIZ1Q96SL8 496 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 ZDHHC5Q9C0B5 715 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 RNF38Q9H0F5 515 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 FAM124BQ9H5Z6 455 aaPredicted RBP8.36□□□□□ -1.07
NXF1-215ENST00000533440 CD248Q9HCU0 757 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 ARHGEF4Q9NR80 690 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 DDX43Q9NXZ2 648 aaKnown RBP8.36□□□□□ -1.07
NXF1-215ENST00000533440 GTF3C4Q9UKN8 822 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 PCOLCE2Q9UKZ9 415 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 HCN2Q9UL51 889 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 ODF2LQ9ULJ1 636 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 NOL7Q9UMY1 257 aaKnown RBP8.36□□□□□ -1.07
NXF1-215ENST00000533440 PCDHB6Q9Y5E3 794 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 STYXL1Q9Y6J8 313 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 MYOFQ9NZM1 2061 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 A0A1W2PQF6 199 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 ANKRD63C9JTQ0 380 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 GABRDO14764 452 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 ZNF217O75362 1048 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 C1QL1O75973 258 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 ADH1CP00326 375 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 PRB1P04280 392 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 PYGBP11216 843 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 ADH5P11766 374 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 ZNF131P52739 623 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 GTF2BQ00403 316 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 KDSRQ06136 332 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 GRIK2Q13002 908 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 CAMK2BQ13554 666 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 PLEKHG6Q3KR16 790 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 ADALQ6DHV7 355 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 FAM171BQ6P995 826 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 VSTM1Q6UX27 236 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 CRELD2Q6UXH1 353 aaPredicted RBP8.35□□□□□ -1.07
NXF1-215ENST00000533440 DTHD1Q6ZMT9 781 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 DBX2Q6ZNG2 339 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 OSTM1Q86WC4 334 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 SPATA2LQ8IUW3 424 aaPredicted RBP8.35□□□□□ -1.07
NXF1-215ENST00000533440 SCN4BQ8IWT1 228 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 ETFBKMTQ8IXQ9 262 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 ZNF513Q8N8E2 541 aaPredicted RBP8.35□□□□□ -1.07
NXF1-215ENST00000533440 CXorf38Q8TB03 319 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 BAHD1Q8TBE0 780 aaPredicted RBP8.35□□□□□ -1.07
NXF1-215ENST00000533440 CRELD1Q96HD1 420 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 HSPA12BQ96MM6 686 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 TTLL2Q9BWV7 592 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 TOR4AQ9NXH8 423 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 TRPM5Q9NZQ8 1165 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 SUSD2Q9UGT4 822 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 STARD13Q9Y3M8 1113 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 CPQQ9Y646 472 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 CFAP46Q8IYW2 2715 aa8.35□□□□□ -1.07
NXF1-215ENST00000533440 TBC1D3BA6NDS4 549 aa8.34□□□□□ -1.07
NXF1-215ENST00000533440 ZNF840PA6NDX5 716 aa8.34□□□□□ -1.07
NXF1-215ENST00000533440 TRABD2BA6NFA1 517 aa8.34□□□□□ -1.07
NXF1-215ENST00000533440 TISP43B9A030 160 aa8.34□□□□□ -1.07
NXF1-215ENST00000533440 K7ENM7 598 aa8.34□□□□□ -1.07
NXF1-215ENST00000533440 HCRTO43612 131 aa8.34□□□□□ -1.07
NXF1-215ENST00000533440 TRAK2O60296 914 aa8.34□□□□□ -1.07
NXF1-215ENST00000533440 HUS1O60921 280 aa8.34□□□□□ -1.07
NXF1-215ENST00000533440 IL18RAPO95256 599 aa8.34□□□□□ -1.07
NXF1-215ENST00000533440 OAS1P00973 400 aaKnown RBP8.34□□□□□ -1.07
NXF1-215ENST00000533440 ZNF883P0CG24 379 aa8.34□□□□□ -1.07
NXF1-215ENST00000533440 HOXB2P14652 356 aa8.34□□□□□ -1.07
NXF1-215ENST00000533440 NDUFV2P19404 249 aa8.34□□□□□ -1.07
NXF1-215ENST00000533440 PCSK1P29120 753 aa8.34□□□□□ -1.07
NXF1-215ENST00000533440 POLR2BP30876 1174 aaKnown RBP8.34□□□□□ -1.07
NXF1-215ENST00000533440 NTSR1P30989 418 aa8.34□□□□□ -1.07
NXF1-215ENST00000533440 ABCD1P33897 745 aa8.34□□□□□ -1.07
NXF1-215ENST00000533440 PPP3CCP48454 512 aa8.34□□□□□ -1.07
NXF1-215ENST00000533440 LHX1P48742 406 aa8.34□□□□□ -1.07
NXF1-215ENST00000533440 USP46P62068 366 aa8.34□□□□□ -1.07
NXF1-215ENST00000533440 GAD2Q05329 585 aa8.34□□□□□ -1.07
NXF1-215ENST00000533440 CYP4F3Q08477 520 aa8.34□□□□□ -1.07
NXF1-215ENST00000533440 ZRSR1Q15695 479 aaKnown RBP8.34□□□□□ -1.07
NXF1-215ENST00000533440 TMEM119Q4V9L6 283 aa8.34□□□□□ -1.07
NXF1-215ENST00000533440 LY6G5CQ5SRR4 150 aa8.34□□□□□ -1.07
NXF1-215ENST00000533440 SYCP2LQ5T4T6 812 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms