RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 KMT2EQ8IZD2 1858 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 TRAV19A0A0A6YYK7 116 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 C2orf78A6NCI8 922 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 KCNJ18B7U540 433 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 OLFM2O95897 454 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 PAEPP09466 180 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 ZDHHC11BP0C7U3 371 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 ZNF132P52740 706 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 KCNJ12Q14500 433 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 HSP90AA4PQ58FG1 418 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 TCP11X2Q5H9J9 407 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 SNX30Q5VWJ9 437 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 CWF19L1Q69YN2 538 aaKnown RBP21.63■■□□□ 1.05
CCS-208ENST00000533244 GPRIN1Q7Z2K8 1008 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 BPIFB1Q8TDL5 484 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 IRF7Q92985 503 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 NDST4Q9H3R1 872 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 BRD9Q9H8M2 597 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 KIAA1257Q9ULG3 409 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 RNF225M0QZC1 329 aaPredicted RBP21.62■■□□□ 1.05
CCS-208ENST00000533244 DPYSL4O14531 572 aa21.62■■□□□ 1.05
CCS-208ENST00000533244 CHADO15335 359 aa21.62■■□□□ 1.05
CCS-208ENST00000533244 OAS1P00973 400 aaKnown RBP21.62■■□□□ 1.05
CCS-208ENST00000533244 USP17L7P0C7H9 530 aa21.62■■□□□ 1.05
CCS-208ENST00000533244 VDRP11473 427 aa21.62■■□□□ 1.05
CCS-208ENST00000533244 SLC9A1P19634 815 aa21.62■■□□□ 1.05
CCS-208ENST00000533244 GDI1P31150 447 aa21.62■■□□□ 1.05
CCS-208ENST00000533244 TYRO3Q06418 890 aa21.62■■□□□ 1.05
CCS-208ENST00000533244 EXOC3L4Q17RC7 722 aa21.62■■□□□ 1.05
CCS-208ENST00000533244 KLHL40Q2TBA0 621 aa21.62■■□□□ 1.05
CCS-208ENST00000533244 VWA3BQ502W6 1294 aa21.62■■□□□ 1.05
CCS-208ENST00000533244 SGO2Q562F6 1265 aa21.62■■□□□ 1.05
CCS-208ENST00000533244 CAVIN1Q6NZI2 390 aaKnown RBP21.62■■□□□ 1.05
CCS-208ENST00000533244 TMEM270Q6UE05 265 aa21.62■■□□□ 1.05
CCS-208ENST00000533244 SUGP1Q8IWZ8 645 aaKnown RBP21.62■■□□□ 1.05
CCS-208ENST00000533244 ANKRD52Q8NB46 1076 aa21.62■■□□□ 1.05
CCS-208ENST00000533244 RIN3Q8TB24 985 aa21.62■■□□□ 1.05
CCS-208ENST00000533244 FBXO32Q969P5 355 aa21.62■■□□□ 1.05
CCS-208ENST00000533244 CYP2S1Q96SQ9 504 aa21.62■■□□□ 1.05
CCS-208ENST00000533244 UBXN6Q9BZV1 441 aa21.62■■□□□ 1.05
CCS-208ENST00000533244 FBXO44Q9H4M3 255 aa21.62■■□□□ 1.05
CCS-208ENST00000533244 TRPC7Q9HCX4 862 aa21.62■■□□□ 1.05
CCS-208ENST00000533244 PCDHB4Q9Y5E5 795 aa21.62■■□□□ 1.05
CCS-208ENST00000533244 HELZP42694 1942 aaKnown RBP21.61■■□□□ 1.05
CCS-208ENST00000533244 O00370 1275 aa21.61■■□□□ 1.05
CCS-208ENST00000533244 ZNF263O14978 683 aa21.61■■□□□ 1.05
CCS-208ENST00000533244 TCF3P15923 654 aa21.61■■□□□ 1.05
CCS-208ENST00000533244 PON1P27169 355 aa21.61■■□□□ 1.05
CCS-208ENST00000533244 PDE6CP51160 858 aa21.61■■□□□ 1.05
CCS-208ENST00000533244 STARD6P59095 220 aa21.61■■□□□ 1.05
CCS-208ENST00000533244 PRKCQQ04759 706 aa21.61■■□□□ 1.05
CCS-208ENST00000533244 IFRD2Q12894 506 aaPredicted RBP21.61■■□□□ 1.05
CCS-208ENST00000533244 MLF2Q15773 248 aaPredicted RBP21.61■■□□□ 1.05
CCS-208ENST00000533244 SLC44A4Q53GD3 710 aa21.61■■□□□ 1.05
CCS-208ENST00000533244 ENOSF1Q7L5Y1 443 aa21.61■■□□□ 1.05
CCS-208ENST00000533244 TTC30AQ86WT1 665 aa21.61■■□□□ 1.05
CCS-208ENST00000533244 ARL14EPQ8N8R7 260 aaPredicted RBP21.61■■□□□ 1.05
CCS-208ENST00000533244 FAM81BQ96LP2 452 aa21.61■■□□□ 1.05
CCS-208ENST00000533244 DDX23Q9BUQ8 820 aaKnown RBP21.61■■□□□ 1.05
CCS-208ENST00000533244 APEX2Q9UBZ4 518 aa21.61■■□□□ 1.05
CCS-208ENST00000533244 TSPAN16Q9UKR8 245 aa21.61■■□□□ 1.05
CCS-208ENST00000533244 ARHGAP26Q9UNA1 814 aa21.61■■□□□ 1.05
CCS-208ENST00000533244 COL4A3Q01955 1670 aa21.6■■□□□ 1.05
CCS-208ENST00000533244 TICRRQ7Z2Z1 1910 aa21.6■■□□□ 1.05
CCS-208ENST00000533244 CKMP06732 381 aa21.6■■□□□ 1.05
CCS-208ENST00000533244 PRKCSHP14314 528 aaPredicted RBP21.6■■□□□ 1.05
CCS-208ENST00000533244 HDCP19113 662 aa21.6■■□□□ 1.05
CCS-208ENST00000533244 CLCN5P51795 746 aa21.6■■□□□ 1.05
CCS-208ENST00000533244 KIF11P52732 1056 aa21.6■■□□□ 1.05
CCS-208ENST00000533244 VCPP55072 806 aaKnown RBP21.6■■□□□ 1.05
CCS-208ENST00000533244 MYL5Q02045 173 aa21.6■■□□□ 1.05
CCS-208ENST00000533244 USP4Q13107 963 aa21.6■■□□□ 1.05
CCS-208ENST00000533244 ARHGAP29Q52LW3 1261 aa21.6■■□□□ 1.05
CCS-208ENST00000533244 SMYD5Q6GMV2 418 aa21.6■■□□□ 1.05
CCS-208ENST00000533244 DPY19L2P1Q6NXN4 242 aa21.6■■□□□ 1.05
CCS-208ENST00000533244 YAF2Q8IY57 180 aa21.6■■□□□ 1.05
CCS-208ENST00000533244 RBBP8NLQ8NC74 664 aaPredicted RBP21.6■■□□□ 1.05
CCS-208ENST00000533244 TFAP2BQ92481 460 aa21.6■■□□□ 1.05
CCS-208ENST00000533244 MFSD1Q9H3U5 465 aa21.6■■□□□ 1.05
CCS-208ENST00000533244 SIX2Q9NPC8 291 aa21.6■■□□□ 1.05
CCS-208ENST00000533244 UBE2TQ9NPD8 197 aaPredicted RBP21.6■■□□□ 1.05
CCS-208ENST00000533244 SCML2Q9UQR0 700 aa21.6■■□□□ 1.05
CCS-208ENST00000533244 USP3Q9Y6I4 520 aa21.6■■□□□ 1.05
CCS-208ENST00000533244 MYO16Q9Y6X6 1858 aa21.59■■□□□ 1.05
CCS-208ENST00000533244 SHISA7A6NL88 538 aa21.59■■□□□ 1.05
CCS-208ENST00000533244 CD19P15391 556 aa21.59■■□□□ 1.05
CCS-208ENST00000533244 TUBP50607 506 aa21.59■■□□□ 1.05
CCS-208ENST00000533244 SLC7A9P82251 487 aa21.59■■□□□ 1.05
CCS-208ENST00000533244 ZNF77Q15935 545 aa21.59■■□□□ 1.05
CCS-208ENST00000533244 GOLGA7BQ2TAP0 167 aa21.59■■□□□ 1.05
CCS-208ENST00000533244 PKDCCQ504Y2 493 aa21.59■■□□□ 1.05
CCS-208ENST00000533244 ASTLQ6HA08 431 aaPredicted RBP21.59■■□□□ 1.05
CCS-208ENST00000533244 GJB7Q6PEY0 223 aa21.59■■□□□ 1.05
CCS-208ENST00000533244 SHDQ96IW2 340 aa21.59■■□□□ 1.05
CCS-208ENST00000533244 ZSWIM1Q9BR11 485 aa21.59■■□□□ 1.05
CCS-208ENST00000533244 RNF38Q9H0F5 515 aa21.59■■□□□ 1.05
CCS-208ENST00000533244 TBC1D17Q9HA65 648 aa21.59■■□□□ 1.05
CCS-208ENST00000533244 HEBP1Q9NRV9 189 aa21.59■■□□□ 1.05
CCS-208ENST00000533244 FANCLQ9NW38 375 aa21.59■■□□□ 1.05
CCS-208ENST00000533244 GMIPQ9P107 970 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms