RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 SDCBP2Q9H190 292 aa24.91■■□□□ 1.58
SMPD1-209ENST00000533196 ECT2Q9H8V3 914 aa24.91■■□□□ 1.58
SMPD1-209ENST00000533196 DMAP1Q9NPF5 467 aaPredicted RBP24.91■■□□□ 1.58
SMPD1-209ENST00000533196 TMEM30AQ9NV96 361 aa24.91■■□□□ 1.58
SMPD1-209ENST00000533196 OTOL1A6NHN0 477 aaPredicted RBP24.9■■□□□ 1.58
SMPD1-209ENST00000533196 CLDN5O00501 218 aa24.9■■□□□ 1.58
SMPD1-209ENST00000533196 ARSAP15289 507 aa24.9■■□□□ 1.58
SMPD1-209ENST00000533196 YWHAQP27348 245 aa24.9■■□□□ 1.58
SMPD1-209ENST00000533196 ASPAP45381 313 aa24.9■■□□□ 1.58
SMPD1-209ENST00000533196 TAF10Q12962 218 aa24.9■■□□□ 1.58
SMPD1-209ENST00000533196 NR1H3Q13133 447 aa24.9■■□□□ 1.58
SMPD1-209ENST00000533196 COBLL1Q53SF7 1204 aa24.9■■□□□ 1.58
SMPD1-209ENST00000533196 PAQR9Q6ZVX9 377 aa24.9■■□□□ 1.58
SMPD1-209ENST00000533196 MED10Q9BTT4 135 aa24.9■■□□□ 1.58
SMPD1-209ENST00000533196 CYP3A43Q9HB55 503 aa24.9■■□□□ 1.58
SMPD1-209ENST00000533196 ATG13O75143 517 aa24.89■■□□□ 1.58
SMPD1-209ENST00000533196 OAS1P00973 400 aaKnown RBP24.89■■□□□ 1.58
SMPD1-209ENST00000533196 DRD1P21728 446 aa24.89■■□□□ 1.58
SMPD1-209ENST00000533196 HOXA6P31267 233 aa24.89■■□□□ 1.58
SMPD1-209ENST00000533196 EML3Q32P44 896 aa24.89■■□□□ 1.58
SMPD1-209ENST00000533196 Q6ZS52 159 aa24.89■■□□□ 1.58
SMPD1-209ENST00000533196 CCDC150Q8NCX0 1101 aa24.89■■□□□ 1.58
SMPD1-209ENST00000533196 FAXDC2Q96IV6 333 aa24.89■■□□□ 1.58
SMPD1-209ENST00000533196 TIGD1Q96MW7 591 aa24.89■■□□□ 1.58
SMPD1-209ENST00000533196 DNAI2Q9GZS0 605 aa24.89■■□□□ 1.58
SMPD1-209ENST00000533196 IL37Q9NZH6 218 aa24.89■■□□□ 1.58
SMPD1-209ENST00000533196 HOOK1Q9UJC3 728 aaKnown RBP24.89■■□□□ 1.58
SMPD1-209ENST00000533196 SMC2O95347 1197 aa24.88■■□□□ 1.57
SMPD1-209ENST00000533196 CNR2P34972 360 aa24.88■■□□□ 1.57
SMPD1-209ENST00000533196 GJA4P35212 333 aa24.88■■□□□ 1.57
SMPD1-209ENST00000533196 GCLMP48507 274 aa24.88■■□□□ 1.57
SMPD1-209ENST00000533196 NDST1P52848 882 aa24.88■■□□□ 1.57
SMPD1-209ENST00000533196 PPP3CAQ08209 521 aa24.88■■□□□ 1.57
SMPD1-209ENST00000533196 INCA1Q0VD86 236 aa24.88■■□□□ 1.57
SMPD1-209ENST00000533196 PNOCQ13519 176 aa24.88■■□□□ 1.57
SMPD1-209ENST00000533196 FBXO43Q4G163 708 aa24.88■■□□□ 1.57
SMPD1-209ENST00000533196 FSTL4Q6MZW2 842 aa24.88■■□□□ 1.57
SMPD1-209ENST00000533196 ACOT1Q86TX2 421 aa24.88■■□□□ 1.57
SMPD1-209ENST00000533196 DDX42Q86XP3 938 aaKnown RBP eCLIP24.88■■□□□ 1.57
SMPD1-209ENST00000533196 FUKQ8N0W3 1084 aa24.88■■□□□ 1.57
SMPD1-209ENST00000533196 ENGASEQ8NFI3 743 aa24.88■■□□□ 1.57
SMPD1-209ENST00000533196 SECISBP2LQ93073 1101 aaKnown RBP24.88■■□□□ 1.57
SMPD1-209ENST00000533196 CHFRQ96EP1 664 aa24.88■■□□□ 1.57
SMPD1-209ENST00000533196 HINFPQ9BQA5 517 aa24.88■■□□□ 1.57
SMPD1-209ENST00000533196 TMEM8AQ9HCN3 771 aa24.88■■□□□ 1.57
SMPD1-209ENST00000533196 WNT6Q9Y6F9 365 aa24.88■■□□□ 1.57
SMPD1-209ENST00000533196 ATG2BQ96BY7 2078 aa24.88■■□□□ 1.57
SMPD1-209ENST00000533196 LEFTY2O00292 366 aa24.87■■□□□ 1.57
SMPD1-209ENST00000533196 TNFRSF10BO14763 440 aa24.87■■□□□ 1.57
SMPD1-209ENST00000533196 CETN3O15182 167 aa24.87■■□□□ 1.57
SMPD1-209ENST00000533196 STX10O60499 249 aa24.87■■□□□ 1.57
SMPD1-209ENST00000533196 NFATC1O95644 943 aa24.87■■□□□ 1.57
SMPD1-209ENST00000533196 TRIM49P0CI25 452 aa24.87■■□□□ 1.57
SMPD1-209ENST00000533196 TRIM49CP0CI26 452 aa24.87■■□□□ 1.57
SMPD1-209ENST00000533196 ZNF658Q5TYW1 1059 aaPredicted RBP24.87■■□□□ 1.57
SMPD1-209ENST00000533196 SNX30Q5VWJ9 437 aa24.87■■□□□ 1.57
SMPD1-209ENST00000533196 KRT39Q6A163 491 aa24.87■■□□□ 1.57
SMPD1-209ENST00000533196 SPOPLQ6IQ16 392 aa24.87■■□□□ 1.57
SMPD1-209ENST00000533196 GPR161Q8N6U8 529 aaKnown RBP24.87■■□□□ 1.57
SMPD1-209ENST00000533196 TAS1R2Q8TE23 839 aa24.87■■□□□ 1.57
SMPD1-209ENST00000533196 FBXO32Q969P5 355 aa24.87■■□□□ 1.57
SMPD1-209ENST00000533196 KCNK16Q96T55 309 aa24.87■■□□□ 1.57
SMPD1-209ENST00000533196 P2RY13Q9BPV8 354 aa24.87■■□□□ 1.57
SMPD1-209ENST00000533196 CSNK1G1Q9HCP0 422 aa24.87■■□□□ 1.57
SMPD1-209ENST00000533196 SMG5Q9UPR3 1016 aaKnown RBP24.87■■□□□ 1.57
SMPD1-209ENST00000533196 FAM92AA1XBS5 289 aa24.86■■□□□ 1.57
SMPD1-209ENST00000533196 K7ESF4 209 aa24.86■■□□□ 1.57
SMPD1-209ENST00000533196 SLC9A3R1O14745 358 aaPredicted RBP24.86■■□□□ 1.57
SMPD1-209ENST00000533196 AP1G2O75843 785 aa24.86■■□□□ 1.57
SMPD1-209ENST00000533196 TUBP50607 506 aa24.86■■□□□ 1.57
SMPD1-209ENST00000533196 GALK1P51570 392 aa24.86■■□□□ 1.57
SMPD1-209ENST00000533196 SLC5A3P53794 718 aa24.86■■□□□ 1.57
SMPD1-209ENST00000533196 LONP2Q86WA8 852 aa24.86■■□□□ 1.57
SMPD1-209ENST00000533196 TTC39CQ8N584 583 aa24.86■■□□□ 1.57
SMPD1-209ENST00000533196 CCDC26Q8TAB7 109 aa24.86■■□□□ 1.57
SMPD1-209ENST00000533196 SPATA20Q8TB22 786 aa24.86■■□□□ 1.57
SMPD1-209ENST00000533196 ELMO3Q96BJ8 720 aa24.86■■□□□ 1.57
SMPD1-209ENST00000533196 NIF3L1Q9GZT8 377 aa24.86■■□□□ 1.57
SMPD1-209ENST00000533196 RNF38Q9H0F5 515 aa24.86■■□□□ 1.57
SMPD1-209ENST00000533196 KRT82Q9NSB4 513 aa24.86■■□□□ 1.57
SMPD1-209ENST00000533196 NCDNQ9UBB6 729 aa24.86■■□□□ 1.57
SMPD1-209ENST00000533196 CHURC1-FNTBB4DL54 471 aa24.85■■□□□ 1.57
SMPD1-209ENST00000533196 ABL1P00519 1130 aa24.85■■□□□ 1.57
SMPD1-209ENST00000533196 EPB41P11171 864 aaKnown RBP24.85■■□□□ 1.57
SMPD1-209ENST00000533196 IFRD2Q12894 506 aaPredicted RBP24.85■■□□□ 1.57
SMPD1-209ENST00000533196 ELOA2Q8IYF1 753 aaPredicted RBP24.85■■□□□ 1.57
SMPD1-209ENST00000533196 TTC16Q8NEE8 873 aa24.85■■□□□ 1.57
SMPD1-209ENST00000533196 SLC2A14Q8TDB8 520 aa24.85■■□□□ 1.57
SMPD1-209ENST00000533196 CD101Q93033 1021 aa24.85■■□□□ 1.57
SMPD1-209ENST00000533196 HNRNPABQ99729 332 aaKnown RBP24.85■■□□□ 1.57
SMPD1-209ENST00000533196 TSG101Q99816 390 aa24.85■■□□□ 1.57
SMPD1-209ENST00000533196 NT5C1AQ9BXI3 368 aa24.85■■□□□ 1.57
SMPD1-209ENST00000533196 FBXO44Q9H4M3 255 aa24.85■■□□□ 1.57
SMPD1-209ENST00000533196 FAM124BQ9H5Z6 455 aaPredicted RBP24.85■■□□□ 1.57
SMPD1-209ENST00000533196 CPQQ9Y646 472 aa24.85■■□□□ 1.57
SMPD1-209ENST00000533196 ZDHHC11BP0C7U3 371 aa24.84■■□□□ 1.57
SMPD1-209ENST00000533196 PRCPP42785 496 aa24.84■■□□□ 1.57
SMPD1-209ENST00000533196 ZXDBP98169 803 aa24.84■■□□□ 1.57
SMPD1-209ENST00000533196 HECTD3Q5T447 861 aa24.84■■□□□ 1.57
SMPD1-209ENST00000533196 SMYD4Q8IYR2 804 aaPredicted RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms