RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 ZMYND8Q9ULU4 1186 aaPredicted RBP11.73□□□□□ -0.53
PTPRK-221ENST00000532331 ITM2BQ9Y287 266 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 NFAT5O94916 1531 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 MOXD2PA6NHM9 499 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 CCDC22O60826 627 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 CXCL14O95715 111 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 HSPA9P38646 679 aaKnown RBP11.73□□□□□ -0.53
PTPRK-221ENST00000532331 LRRC14Q15048 493 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 FBXO22Q8NEZ5 403 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 NFKBIZQ9BYH8 718 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 DCLK3Q9C098 648 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 CYTH3O43739 400 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 ANXA9O76027 345 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 ENDOD1O94919 500 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 KCNA2P16389 499 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 RGS4P49798 205 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 TBX4P57082 545 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 CCZ1BP86790 482 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 CCZ1P86791 482 aaPredicted RBP11.73□□□□□ -0.53
PTPRK-221ENST00000532331 MAPRE2Q15555 327 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 ZNF284Q2VY69 593 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 C1orf146Q5VVC0 180 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 OTOP2Q7RTS6 562 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 DSG4Q86SJ6 1040 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 PTPRN2Q92932 1015 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 TSPAN17Q96FV3 270 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 SENP8Q96LD8 212 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 RBM15Q96T37 977 aaKnown RBP eCLIP11.73□□□□□ -0.531e-15■□□□□ 9.9
PTPRK-221ENST00000532331 TMEM134Q9H6X4 195 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 TLE6Q9H808 572 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 PPP1R3GB7ZBB8 358 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 MAFO75444 373 aaPredicted RBP11.73□□□□□ -0.53
PTPRK-221ENST00000532331 ALDH1A2O94788 518 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 LAG3P18627 525 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 TOB1P50616 345 aaPredicted RBP11.73□□□□□ -0.53
PTPRK-221ENST00000532331 NDST1P52848 882 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 BYSLQ13895 437 aaKnown RBP11.73□□□□□ -0.53
PTPRK-221ENST00000532331 SPATA18Q8TC71 538 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 CALML6Q8TD86 181 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 CORO1BQ9BR76 489 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 OSBPL8Q9BZF1 889 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 TRABDQ9H4I3 376 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 PAK5Q9P286 719 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 ZC3H7BQ9UGR2 993 aaKnown RBP11.73□□□□□ -0.53
PTPRK-221ENST00000532331 XPO7Q9UIA9 1087 aaKnown RBP11.73□□□□□ -0.53
PTPRK-221ENST00000532331 RWDD3Q9Y3V2 267 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 CCDC78A2IDD5 438 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 CBX4O00257 560 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 EML1O00423 815 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 ATMINO43313 823 aaPredicted RBP11.73□□□□□ -0.53
PTPRK-221ENST00000532331 DDHD2O94830 711 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 GFAPP14136 432 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 CCR1P32246 355 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 WASHC5Q12768 1159 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 NAPEPLDQ6IQ20 393 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.73□□□□□ -0.53
PTPRK-221ENST00000532331 NLRP14Q86W24 1093 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 CXorf38Q8TB03 319 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 TAS1R2Q8TE23 839 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 SLC26A7Q8TE54 656 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 C11orf49Q9H6J7 331 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 CASS4Q9NQ75 786 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 FRMPD4Q14CM0 1322 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 TRAV19A0A0A6YYK7 116 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 COMTP21964 271 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 AARSP49588 968 aaKnown RBP eCLIP11.72□□□□□ -0.53
PTPRK-221ENST00000532331 SGCGQ13326 291 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 RETSATQ6NUM9 610 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 CTU1Q7Z7A3 348 aaKnown RBP11.72□□□□□ -0.53
PTPRK-221ENST00000532331 BRSK2Q8IWQ3 736 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 TC2NQ8N9U0 490 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 MAML3Q96JK9 1138 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 TEX12Q9BXU0 123 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 ASPSCR1Q9BZE9 553 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 EPC1Q9H2F5 836 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 ANLNQ9NQW6 1124 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 KBTBD4Q9NVX7 518 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 SERPINB9P50453 376 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 TRADDQ15628 312 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 E4F1Q66K89 784 aaPredicted RBP11.72□□□□□ -0.53
PTPRK-221ENST00000532331 TRIM65Q6PJ69 517 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 TFB1MQ8WVM0 346 aaKnown RBP11.72□□□□□ -0.53
PTPRK-221ENST00000532331 ERGIC2Q96RQ1 377 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 IRX2Q9BZI1 471 aaPredicted RBP11.72□□□□□ -0.53
PTPRK-221ENST00000532331 FOXP3Q9BZS1 431 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.72□□□□□ -0.534e-27■■■□□ 15.4
PTPRK-221ENST00000532331 ADA2Q9NZK5 511 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 NEU2Q9Y3R4 380 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 LTBP3Q9NS15 1303 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 C2orf81A6NN90 581 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 SMAPO00193 183 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 AGTP01019 485 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 FNDC3BQ53EP0 1204 aaKnown RBP11.72□□□□□ -0.53
PTPRK-221ENST00000532331 SYCP2LQ5T4T6 812 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 LRRC8DQ7L1W4 858 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 KIAA0319LQ8IZA0 1049 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 ZNF557Q8N988 423 aaPredicted RBP11.72□□□□□ -0.53
PTPRK-221ENST00000532331 LZICQ8WZA0 190 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 TRIM51Q9BSJ1 452 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 COG4Q9H9E3 785 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms