RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 TAF10Q12962 218 aa17.9■□□□□ 0.46
CPSF1-207ENST00000531727 NCOA4Q13772 614 aa17.9■□□□□ 0.46
CPSF1-207ENST00000531727 ZNF667Q5HYK9 610 aa17.9■□□□□ 0.46
CPSF1-207ENST00000531727 CAMKK1Q8N5S9 505 aa17.9■□□□□ 0.46
CPSF1-207ENST00000531727 KIAA1958Q8N8K9 716 aa17.9■□□□□ 0.46
CPSF1-207ENST00000531727 RPLP0P6Q8NHW5 317 aa17.9■□□□□ 0.46
CPSF1-207ENST00000531727 GAB3Q8WWW8 586 aa17.9■□□□□ 0.46
CPSF1-207ENST00000531727 EZH1Q92800 747 aaPredicted RBP17.9■□□□□ 0.46
CPSF1-207ENST00000531727 SLITRK1Q96PX8 696 aa17.9■□□□□ 0.46
CPSF1-207ENST00000531727 RNF38Q9H0F5 515 aa17.9■□□□□ 0.46
CPSF1-207ENST00000531727 SEMA4GQ9NTN9 838 aa17.9■□□□□ 0.46
CPSF1-207ENST00000531727 HPSEQ9Y251 543 aa17.9■□□□□ 0.46
CPSF1-207ENST00000531727 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.9■□□□□ 0.46
CPSF1-207ENST00000531727 ATP8B3O60423 1300 aa17.9■□□□□ 0.46
CPSF1-207ENST00000531727 PDXKO00764 312 aa17.89■□□□□ 0.45
CPSF1-207ENST00000531727 RPP40O75818 363 aaKnown RBP17.89■□□□□ 0.45
CPSF1-207ENST00000531727 CLSTN1O94985 981 aa17.89■□□□□ 0.45
CPSF1-207ENST00000531727 VNN1O95497 513 aa17.89■□□□□ 0.45
CPSF1-207ENST00000531727 ABL1P00519 1130 aa17.89■□□□□ 0.45
CPSF1-207ENST00000531727 CSRP2Q16527 193 aa17.89■□□□□ 0.45
CPSF1-207ENST00000531727 NUP93Q8N1F7 819 aa17.89■□□□□ 0.45
CPSF1-207ENST00000531727 SPATA32Q96LK8 384 aa17.89■□□□□ 0.45
CPSF1-207ENST00000531727 RTKNQ9BST9 563 aa17.89■□□□□ 0.45
CPSF1-207ENST00000531727 CPQQ9Y646 472 aa17.89■□□□□ 0.45
CPSF1-207ENST00000531727 EML5Q05BV3 1969 aa17.88■□□□□ 0.45
CPSF1-207ENST00000531727 RTN3O95197 1032 aaPredicted RBP17.88■□□□□ 0.45
CPSF1-207ENST00000531727 NR3C1P04150 777 aa17.88■□□□□ 0.45
CPSF1-207ENST00000531727 YWHAQP27348 245 aa17.88■□□□□ 0.45
CPSF1-207ENST00000531727 RAP1GAPP47736 663 aa17.88■□□□□ 0.45
CPSF1-207ENST00000531727 DLG4P78352 724 aa17.88■□□□□ 0.45
CPSF1-207ENST00000531727 IFRD2Q12894 506 aaPredicted RBP17.88■□□□□ 0.45
CPSF1-207ENST00000531727 ZACNQ401N2 412 aa17.88■□□□□ 0.45
CPSF1-207ENST00000531727 SCARA5Q6ZMJ2 495 aa17.88■□□□□ 0.45
CPSF1-207ENST00000531727 PRR23CQ6ZRP0 262 aa17.88■□□□□ 0.45
CPSF1-207ENST00000531727 SYT13Q7L8C5 426 aa17.88■□□□□ 0.45
CPSF1-207ENST00000531727 FAM35AQ86V20 835 aa17.88■□□□□ 0.45
CPSF1-207ENST00000531727 PDZD8Q8NEN9 1154 aa17.88■□□□□ 0.45
CPSF1-207ENST00000531727 ACDQ96AP0 544 aa17.88■□□□□ 0.45
CPSF1-207ENST00000531727 TNIP3Q96KP6 325 aa17.88■□□□□ 0.45
CPSF1-207ENST00000531727 HHIPQ96QV1 700 aa17.88■□□□□ 0.45
CPSF1-207ENST00000531727 SDCBP2Q9H190 292 aa17.88■□□□□ 0.45
CPSF1-207ENST00000531727 POLR3BQ9NW08 1133 aaPredicted RBP17.88■□□□□ 0.45
CPSF1-207ENST00000531727 CEP250Q9BV73 2442 aa17.88■□□□□ 0.45
CPSF1-207ENST00000531727 FOXD2O60548 495 aaPredicted RBP17.87■□□□□ 0.45
CPSF1-207ENST00000531727 AKAP3O75969 853 aa17.87■□□□□ 0.45
CPSF1-207ENST00000531727 CCDC192P0DO97 292 aa17.87■□□□□ 0.45
CPSF1-207ENST00000531727 P4HA1P13674 534 aa17.87■□□□□ 0.45
CPSF1-207ENST00000531727 OPRD1P41143 372 aa17.87■□□□□ 0.45
CPSF1-207ENST00000531727 KRT85P78386 507 aa17.87■□□□□ 0.45
CPSF1-207ENST00000531727 SGSM1Q2NKQ1 1148 aa17.87■□□□□ 0.45
CPSF1-207ENST00000531727 PAQR9Q6ZVX9 377 aa17.87■□□□□ 0.45
CPSF1-207ENST00000531727 CACNA2D4Q7Z3S7 1137 aa17.87■□□□□ 0.45
CPSF1-207ENST00000531727 FILIP1Q7Z7B0 1213 aa17.87■□□□□ 0.45
CPSF1-207ENST00000531727 DDX42Q86XP3 938 aaKnown RBP eCLIP17.87■□□□□ 0.45
CPSF1-207ENST00000531727 CCDC26Q8TAB7 109 aa17.87■□□□□ 0.45
CPSF1-207ENST00000531727 NETO1Q8TDF5 533 aa17.87■□□□□ 0.45
CPSF1-207ENST00000531727 TMC2Q8TDI7 906 aa17.87■□□□□ 0.45
CPSF1-207ENST00000531727 OVCA2Q8WZ82 227 aa17.87■□□□□ 0.45
CPSF1-207ENST00000531727 FBXO32Q969P5 355 aa17.87■□□□□ 0.45
CPSF1-207ENST00000531727 ELMO3Q96BJ8 720 aa17.87■□□□□ 0.45
CPSF1-207ENST00000531727 LOXL4Q96JB6 756 aa17.87■□□□□ 0.45
CPSF1-207ENST00000531727 KCNK16Q96T55 309 aa17.87■□□□□ 0.45
CPSF1-207ENST00000531727 MED10Q9BTT4 135 aa17.87■□□□□ 0.45
CPSF1-207ENST00000531727 SMPD4Q9NXE4 827 aa17.87■□□□□ 0.45
CPSF1-207ENST00000531727 ZDHHC9Q9Y397 364 aa17.87■□□□□ 0.45
CPSF1-207ENST00000531727 ATG2BQ96BY7 2078 aa17.87■□□□□ 0.45
CPSF1-207ENST00000531727 RALGAPA1Q6GYQ0 2036 aa17.86■□□□□ 0.45
CPSF1-207ENST00000531727 FAM237AA0A1B0GTK4 181 aa17.86■□□□□ 0.45
CPSF1-207ENST00000531727 SLC9A3R1O14745 358 aaPredicted RBP17.86■□□□□ 0.45
CPSF1-207ENST00000531727 TNFRSF10BO14763 440 aa17.86■□□□□ 0.45
CPSF1-207ENST00000531727 AXIN1O15169 862 aa17.86■□□□□ 0.45
CPSF1-207ENST00000531727 CALUO43852 315 aaPredicted RBP17.86■□□□□ 0.45
CPSF1-207ENST00000531727 RPN1P04843 607 aaKnown RBP17.86■□□□□ 0.45
CPSF1-207ENST00000531727 CYP17A1P05093 508 aa17.86■□□□□ 0.45
CPSF1-207ENST00000531727 SYKP43405 635 aa17.86■□□□□ 0.45
CPSF1-207ENST00000531727 DMC1Q14565 340 aa17.86■□□□□ 0.45
CPSF1-207ENST00000531727 GAB4Q2WGN9 574 aa17.86■□□□□ 0.45
CPSF1-207ENST00000531727 CEP135Q66GS9 1140 aa17.86■□□□□ 0.45
CPSF1-207ENST00000531727 KBTBD6Q86V97 674 aa17.86■□□□□ 0.45
CPSF1-207ENST00000531727 ADGRG2Q8IZP9 1017 aa17.86■□□□□ 0.45
CPSF1-207ENST00000531727 TAF4BQ92750 862 aa17.86■□□□□ 0.45
CPSF1-207ENST00000531727 SMARCD1Q96GM5 515 aa17.86■□□□□ 0.45
CPSF1-207ENST00000531727 CHAMP1Q96JM3 812 aa17.86■□□□□ 0.45
CPSF1-207ENST00000531727 DMAP1Q9NPF5 467 aaPredicted RBP17.86■□□□□ 0.45
CPSF1-207ENST00000531727 IL37Q9NZH6 218 aa17.86■□□□□ 0.45
CPSF1-207ENST00000531727 CFAP97Q9P2B7 532 aa17.86■□□□□ 0.45
CPSF1-207ENST00000531727 TRAF3IP3Q9Y228 551 aa17.86■□□□□ 0.45
CPSF1-207ENST00000531727 FRMD4BQ9Y2L6 1034 aa17.86■□□□□ 0.45
CPSF1-207ENST00000531727 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.85■□□□□ 0.45
CPSF1-207ENST00000531727 IKBKBO14920 756 aa17.85■□□□□ 0.45
CPSF1-207ENST00000531727 EPN2O95208 641 aa17.85■□□□□ 0.45
CPSF1-207ENST00000531727 KIF20AO95235 890 aa17.85■□□□□ 0.45
CPSF1-207ENST00000531727 MBL2P11226 248 aaPredicted RBP17.85■□□□□ 0.45
CPSF1-207ENST00000531727 NDUFA8P51970 172 aa17.85■□□□□ 0.45
CPSF1-207ENST00000531727 SLC5A3P53794 718 aa17.85■□□□□ 0.45
CPSF1-207ENST00000531727 SV2AQ7L0J3 742 aa17.85■□□□□ 0.45
CPSF1-207ENST00000531727 ACOT1Q86TX2 421 aa17.85■□□□□ 0.45
CPSF1-207ENST00000531727 FUKQ8N0W3 1084 aa17.85■□□□□ 0.45
CPSF1-207ENST00000531727 SCAMP5Q8TAC9 235 aa17.85■□□□□ 0.45
CPSF1-207ENST00000531727 CCDC47Q96A33 483 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms