RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 FANCMQ8IYD8 2048 aa23.68■■□□□ 1.38
TRAPPC4-210ENST00000531290 CCDC163A0A0D9SF12 145 aa23.68■■□□□ 1.38
TRAPPC4-210ENST00000531290 LRP3O75074 770 aa23.68■■□□□ 1.38
TRAPPC4-210ENST00000531290 RTN3O95197 1032 aaPredicted RBP23.68■■□□□ 1.38
TRAPPC4-210ENST00000531290 HOXC13P31276 330 aa23.68■■□□□ 1.38
TRAPPC4-210ENST00000531290 RAP1GAPP47736 663 aa23.68■■□□□ 1.38
TRAPPC4-210ENST00000531290 PXNP49023 591 aaPredicted RBP23.68■■□□□ 1.38
TRAPPC4-210ENST00000531290 SLC7A9P82251 487 aa23.68■■□□□ 1.38
TRAPPC4-210ENST00000531290 NAIF1Q69YI7 327 aaPredicted RBP23.68■■□□□ 1.38
TRAPPC4-210ENST00000531290 SCARA5Q6ZMJ2 495 aa23.68■■□□□ 1.38
TRAPPC4-210ENST00000531290 TMC2Q8TDI7 906 aa23.68■■□□□ 1.38
TRAPPC4-210ENST00000531290 RNF38Q9H0F5 515 aa23.68■■□□□ 1.38
TRAPPC4-210ENST00000531290 CDV3Q9UKY7 258 aaKnown RBP23.68■■□□□ 1.38
TRAPPC4-210ENST00000531290 ATP6V1DQ9Y5K8 247 aa23.68■■□□□ 1.38
TRAPPC4-210ENST00000531290 VNN1O95497 513 aa23.67■■□□□ 1.38
TRAPPC4-210ENST00000531290 NDUFA8P51970 172 aa23.67■■□□□ 1.38
TRAPPC4-210ENST00000531290 DLG4P78352 724 aa23.67■■□□□ 1.38
TRAPPC4-210ENST00000531290 ZXDBP98169 803 aa23.67■■□□□ 1.38
TRAPPC4-210ENST00000531290 CAMKK1Q8N5S9 505 aa23.67■■□□□ 1.38
TRAPPC4-210ENST00000531290 PDZD8Q8NEN9 1154 aa23.67■■□□□ 1.38
TRAPPC4-210ENST00000531290 CCDC26Q8TAB7 109 aa23.67■■□□□ 1.38
TRAPPC4-210ENST00000531290 CHAMP1Q96JM3 812 aa23.67■■□□□ 1.38
TRAPPC4-210ENST00000531290 TMEM30AQ9NV96 361 aa23.67■■□□□ 1.38
TRAPPC4-210ENST00000531290 SMPD4Q9NXE4 827 aa23.67■■□□□ 1.38
TRAPPC4-210ENST00000531290 ZDHHC9Q9Y397 364 aa23.67■■□□□ 1.38
TRAPPC4-210ENST00000531290 CPQQ9Y646 472 aa23.67■■□□□ 1.38
TRAPPC4-210ENST00000531290 SLC9A3R1O14745 358 aaPredicted RBP23.66■■□□□ 1.38
TRAPPC4-210ENST00000531290 IKBKBO14920 756 aa23.66■■□□□ 1.38
TRAPPC4-210ENST00000531290 ZACNQ401N2 412 aa23.66■■□□□ 1.38
TRAPPC4-210ENST00000531290 SV2AQ7L0J3 742 aa23.66■■□□□ 1.38
TRAPPC4-210ENST00000531290 KIAA1958Q8N8K9 716 aa23.66■■□□□ 1.38
TRAPPC4-210ENST00000531290 RPLP0P6Q8NHW5 317 aa23.66■■□□□ 1.38
TRAPPC4-210ENST00000531290 TAF4BQ92750 862 aa23.66■■□□□ 1.38
TRAPPC4-210ENST00000531290 FBXO32Q969P5 355 aa23.66■■□□□ 1.38
TRAPPC4-210ENST00000531290 ELMO3Q96BJ8 720 aa23.66■■□□□ 1.38
TRAPPC4-210ENST00000531290 KCNK16Q96T55 309 aa23.66■■□□□ 1.38
TRAPPC4-210ENST00000531290 SCAND2PQ9GZW5 306 aaPredicted RBP23.66■■□□□ 1.38
TRAPPC4-210ENST00000531290 DMXL1Q9Y485 3027 aa23.66■■□□□ 1.38
TRAPPC4-210ENST00000531290 RPP40O75818 363 aaKnown RBP23.65■■□□□ 1.38
TRAPPC4-210ENST00000531290 OAS1P00973 400 aaKnown RBP23.65■■□□□ 1.38
TRAPPC4-210ENST00000531290 MBL2P11226 248 aaPredicted RBP23.65■■□□□ 1.38
TRAPPC4-210ENST00000531290 FILIP1Q7Z7B0 1213 aa23.65■■□□□ 1.38
TRAPPC4-210ENST00000531290 ACOT1Q86TX2 421 aa23.65■■□□□ 1.38
TRAPPC4-210ENST00000531290 FAM35AQ86V20 835 aa23.65■■□□□ 1.38
TRAPPC4-210ENST00000531290 DDX42Q86XP3 938 aaKnown RBP eCLIP23.65■■□□□ 1.38
TRAPPC4-210ENST00000531290 FAM160A2Q8N612 972 aaPredicted RBP23.65■■□□□ 1.38
TRAPPC4-210ENST00000531290 GAB3Q8WWW8 586 aa23.65■■□□□ 1.38
TRAPPC4-210ENST00000531290 OVCA2Q8WZ82 227 aa23.65■■□□□ 1.38
TRAPPC4-210ENST00000531290 SMARCD1Q96GM5 515 aa23.65■■□□□ 1.38
TRAPPC4-210ENST00000531290 SDCBP2Q9H190 292 aa23.65■■□□□ 1.38
TRAPPC4-210ENST00000531290 DMAP1Q9NPF5 467 aaPredicted RBP23.65■■□□□ 1.38
TRAPPC4-210ENST00000531290 SEMA4GQ9NTN9 838 aa23.65■■□□□ 1.38
TRAPPC4-210ENST00000531290 CHORDC1Q9UHD1 332 aaPredicted RBP23.65■■□□□ 1.38
TRAPPC4-210ENST00000531290 TRAF3IP3Q9Y228 551 aa23.65■■□□□ 1.38
TRAPPC4-210ENST00000531290 FAM237AA0A1B0GTK4 181 aa23.64■■□□□ 1.37
TRAPPC4-210ENST00000531290 RHOBTB3O94955 611 aa23.64■■□□□ 1.37
TRAPPC4-210ENST00000531290 OLFM2O95897 454 aa23.64■■□□□ 1.37
TRAPPC4-210ENST00000531290 CCDC192P0DO97 292 aa23.64■■□□□ 1.37
TRAPPC4-210ENST00000531290 TRIM21P19474 475 aaKnown RBP23.64■■□□□ 1.37
TRAPPC4-210ENST00000531290 ATXN1P54253 815 aaKnown RBP23.64■■□□□ 1.37
TRAPPC4-210ENST00000531290 CSRP2Q16527 193 aa23.64■■□□□ 1.37
TRAPPC4-210ENST00000531290 PAQR9Q6ZVX9 377 aa23.64■■□□□ 1.37
TRAPPC4-210ENST00000531290 SYT13Q7L8C5 426 aa23.64■■□□□ 1.37
TRAPPC4-210ENST00000531290 CACNA2D4Q7Z3S7 1137 aa23.64■■□□□ 1.37
TRAPPC4-210ENST00000531290 ADGRG2Q8IZP9 1017 aa23.64■■□□□ 1.37
TRAPPC4-210ENST00000531290 ACDQ96AP0 544 aa23.64■■□□□ 1.37
TRAPPC4-210ENST00000531290 POLR3BQ9NW08 1133 aaPredicted RBP23.64■■□□□ 1.37
TRAPPC4-210ENST00000531290 CFAP97Q9P2B7 532 aa23.64■■□□□ 1.37
TRAPPC4-210ENST00000531290 FOXD2O60548 495 aaPredicted RBP23.63■■□□□ 1.37
TRAPPC4-210ENST00000531290 AP1G2O75843 785 aa23.63■■□□□ 1.37
TRAPPC4-210ENST00000531290 PRR29P0C7W0 189 aa23.63■■□□□ 1.37
TRAPPC4-210ENST00000531290 NR2F2P24468 414 aa23.63■■□□□ 1.37
TRAPPC4-210ENST00000531290 PIK3CAP42336 1068 aa23.63■■□□□ 1.37
TRAPPC4-210ENST00000531290 VAMP7P51809 220 aa23.63■■□□□ 1.37
TRAPPC4-210ENST00000531290 HECTD3Q5T447 861 aa23.63■■□□□ 1.37
TRAPPC4-210ENST00000531290 UNC93AQ86WB7 457 aa23.63■■□□□ 1.37
TRAPPC4-210ENST00000531290 FUKQ8N0W3 1084 aa23.63■■□□□ 1.37
TRAPPC4-210ENST00000531290 SCAMP5Q8TAC9 235 aa23.63■■□□□ 1.37
TRAPPC4-210ENST00000531290 EZH1Q92800 747 aaPredicted RBP23.63■■□□□ 1.37
TRAPPC4-210ENST00000531290 HHIPQ96QV1 700 aa23.63■■□□□ 1.37
TRAPPC4-210ENST00000531290 IMPG2Q9BZV3 1241 aa23.63■■□□□ 1.37
TRAPPC4-210ENST00000531290 COMMD8Q9NX08 183 aa23.63■■□□□ 1.37
TRAPPC4-210ENST00000531290 MAPK8IP1Q9UQF2 711 aa23.63■■□□□ 1.37
TRAPPC4-210ENST00000531290 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.63■■□□□ 1.37
TRAPPC4-210ENST00000531290 A0A1W2PQ27 194 aa23.62■■□□□ 1.37
TRAPPC4-210ENST00000531290 A0A1W2PQ64 194 aa23.62■■□□□ 1.37
TRAPPC4-210ENST00000531290 A0A1W2PQD8 194 aa23.62■■□□□ 1.37
TRAPPC4-210ENST00000531290 MED19A0JLT2 244 aaPredicted RBP23.62■■□□□ 1.37
TRAPPC4-210ENST00000531290 AXIN1O15169 862 aa23.62■■□□□ 1.37
TRAPPC4-210ENST00000531290 MAPK13O15264 365 aa23.62■■□□□ 1.37
TRAPPC4-210ENST00000531290 ASS1P00966 412 aaKnown RBP23.62■■□□□ 1.37
TRAPPC4-210ENST00000531290 KRT13P13646 458 aa23.62■■□□□ 1.37
TRAPPC4-210ENST00000531290 RPL13P26373 211 aaKnown RBP23.62■■□□□ 1.37
TRAPPC4-210ENST00000531290 NDST1P52848 882 aa23.62■■□□□ 1.37
TRAPPC4-210ENST00000531290 SLC5A3P53794 718 aa23.62■■□□□ 1.37
TRAPPC4-210ENST00000531290 DPYDQ12882 1025 aa23.62■■□□□ 1.37
TRAPPC4-210ENST00000531290 DMC1Q14565 340 aa23.62■■□□□ 1.37
TRAPPC4-210ENST00000531290 KRBA2Q6ZNG9 492 aa23.62■■□□□ 1.37
TRAPPC4-210ENST00000531290 INTS8Q75QN2 995 aaKnown RBP23.62■■□□□ 1.37
TRAPPC4-210ENST00000531290 CRYBG2Q8N1P7 616 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms