RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 F11P03951 625 aa22.51■■□□□ 1.19
CAPN1-220ENST00000530567 GJA1P17302 382 aa22.51■■□□□ 1.19
CAPN1-220ENST00000530567 CEBPBP17676 345 aa22.51■■□□□ 1.19
CAPN1-220ENST00000530567 GABRR2P28476 465 aa22.51■■□□□ 1.19
CAPN1-220ENST00000530567 GPD2P43304 727 aa22.51■■□□□ 1.19
CAPN1-220ENST00000530567 PDE6CP51160 858 aa22.51■■□□□ 1.19
CAPN1-220ENST00000530567 ZNF75DP51815 510 aa22.51■■□□□ 1.19
CAPN1-220ENST00000530567 TAF12Q16514 161 aa22.51■■□□□ 1.19
CAPN1-220ENST00000530567 RAB41Q5JT25 222 aa22.51■■□□□ 1.19
CAPN1-220ENST00000530567 CYP4A22Q5TCH4 519 aa22.51■■□□□ 1.19
CAPN1-220ENST00000530567 GET4Q7L5D6 327 aaPredicted RBP22.51■■□□□ 1.19
CAPN1-220ENST00000530567 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.51■■□□□ 1.19
CAPN1-220ENST00000530567 SLC20A1Q8WUM9 679 aa22.51■■□□□ 1.19
CAPN1-220ENST00000530567 IQCDQ96DY2 449 aa22.51■■□□□ 1.19
CAPN1-220ENST00000530567 PHF7Q9BWX1 381 aaPredicted RBP22.51■■□□□ 1.19
CAPN1-220ENST00000530567 CYTH4Q9UIA0 394 aa22.51■■□□□ 1.19
CAPN1-220ENST00000530567 CAPN11Q9UMQ6 739 aa22.51■■□□□ 1.19
CAPN1-220ENST00000530567 FAM50BQ9Y247 325 aa22.51■■□□□ 1.19
CAPN1-220ENST00000530567 MRPS23Q9Y3D9 190 aaKnown RBP22.51■■□□□ 1.19
CAPN1-220ENST00000530567 A0A1W2PRU2 124 aa22.5■■□□□ 1.19
CAPN1-220ENST00000530567 RTN3O95197 1032 aaPredicted RBP22.5■■□□□ 1.19
CAPN1-220ENST00000530567 KIF11P52732 1056 aa22.5■■□□□ 1.19
CAPN1-220ENST00000530567 ARID5AQ03989 594 aa22.5■■□□□ 1.19
CAPN1-220ENST00000530567 TAF3Q5VWG9 929 aa22.5■■□□□ 1.19
CAPN1-220ENST00000530567 PMF1Q6P1K2 205 aa22.5■■□□□ 1.19
CAPN1-220ENST00000530567 IRF2BP2Q7Z5L9 587 aa22.5■■□□□ 1.19
CAPN1-220ENST00000530567 NPAS3Q8IXF0 933 aa22.5■■□□□ 1.19
CAPN1-220ENST00000530567 WDTC1Q8N5D0 677 aa22.5■■□□□ 1.19
CAPN1-220ENST00000530567 ING5Q8WYH8 240 aa22.5■■□□□ 1.19
CAPN1-220ENST00000530567 MYADMQ96S97 322 aa22.5■■□□□ 1.19
CAPN1-220ENST00000530567 ZNF197O14709 1029 aa22.49■■□□□ 1.19
CAPN1-220ENST00000530567 CHRNB2P17787 502 aa22.49■■□□□ 1.19
CAPN1-220ENST00000530567 YWHAQP27348 245 aa22.49■■□□□ 1.19
CAPN1-220ENST00000530567 SLC8A3P57103 927 aa22.49■■□□□ 1.19
CAPN1-220ENST00000530567 IFRD2Q12894 506 aaPredicted RBP22.49■■□□□ 1.19
CAPN1-220ENST00000530567 TAF10Q12962 218 aa22.49■■□□□ 1.19
CAPN1-220ENST00000530567 PASD1Q8IV76 773 aa22.49■■□□□ 1.19
CAPN1-220ENST00000530567 OLIG1Q8TAK6 271 aa22.49■■□□□ 1.19
CAPN1-220ENST00000530567 KCTD13Q8WZ19 329 aa22.49■■□□□ 1.19
CAPN1-220ENST00000530567 FGF13Q92913 245 aa22.49■■□□□ 1.19
CAPN1-220ENST00000530567 LHX5Q9H2C1 402 aa22.49■■□□□ 1.19
CAPN1-220ENST00000530567 COMMD8Q9NX08 183 aa22.49■■□□□ 1.19
CAPN1-220ENST00000530567 AIPL1Q9NZN9 384 aa22.49■■□□□ 1.19
CAPN1-220ENST00000530567 UXTQ9UBK9 157 aaPredicted RBP22.49■■□□□ 1.19
CAPN1-220ENST00000530567 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.49■■□□□ 1.193e-6■□□□□ 10.3
CAPN1-220ENST00000530567 USP3Q9Y6I4 520 aa22.49■■□□□ 1.19
CAPN1-220ENST00000530567 MYO16Q9Y6X6 1858 aa22.49■■□□□ 1.19
CAPN1-220ENST00000530567 ANAPC1Q9H1A4 1944 aa22.49■■□□□ 1.19
CAPN1-220ENST00000530567 TCF20Q9UGU0 1960 aaKnown RBP22.49■■□□□ 1.19
CAPN1-220ENST00000530567 SLC34A2O95436 690 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 FGF19O95750 216 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 MMEP08473 750 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 FERP16591 822 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 CDC25CP30307 473 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 RPL34P49207 117 aaKnown RBP22.48■■□□□ 1.19
CAPN1-220ENST00000530567 RGS7P49802 495 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 ZBED6P86452 979 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 CYP4F8P98187 520 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 FMO1Q01740 532 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 CDR2Q01850 454 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 TEAD2Q15562 447 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 STXBP5Q5T5C0 1151 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 CPLX3Q8WVH0 158 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 MRFAP1L1Q96HT8 127 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 SYT11Q9BT88 431 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 EHD2Q9NZN4 543 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 USTQ9Y2C2 406 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 NCANO14594 1321 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 SP100P23497 879 aaPredicted RBP22.48■■□□□ 1.19
CAPN1-220ENST00000530567 CASP14P31944 242 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 CDH5P33151 784 aaPredicted RBP22.48■■□□□ 1.19
CAPN1-220ENST00000530567 KRT9P35527 623 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 PGFP49763 221 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 ZNF677Q86XU0 584 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 FBXO32Q969P5 355 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 ATXN3LQ9H3M9 355 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 FBXO44Q9H4M3 255 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 CDH7Q9ULB5 785 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 SCML2Q9UQR0 700 aa22.48■■□□□ 1.19
CAPN1-220ENST00000530567 C2CD4DB7Z1M9 353 aa22.47■■□□□ 1.19
CAPN1-220ENST00000530567 TKTL1P51854 596 aa22.47■■□□□ 1.19
CAPN1-220ENST00000530567 ZP2Q05996 745 aa22.47■■□□□ 1.19
CAPN1-220ENST00000530567 ADIGQ0VDE8 80 aa22.47■■□□□ 1.19
CAPN1-220ENST00000530567 TBX2Q13207 712 aaPredicted RBP22.47■■□□□ 1.19
CAPN1-220ENST00000530567 PDCLQ13371 301 aa22.47■■□□□ 1.19
CAPN1-220ENST00000530567 TRIM14Q14142 442 aa22.47■■□□□ 1.19
CAPN1-220ENST00000530567 ASIC2Q16515 512 aa22.47■■□□□ 1.19
CAPN1-220ENST00000530567 SFMBT2Q5VUG0 894 aa22.47■■□□□ 1.19
CAPN1-220ENST00000530567 BHLHA9Q7RTU4 235 aa22.47■■□□□ 1.19
CAPN1-220ENST00000530567 FMNL3Q8IVF7 1028 aa22.47■■□□□ 1.19
CAPN1-220ENST00000530567 C1orf131Q8NDD1 294 aaKnown RBP22.47■■□□□ 1.19
CAPN1-220ENST00000530567 STK32AQ8WU08 396 aa22.47■■□□□ 1.19
CAPN1-220ENST00000530567 HSFY1Q96LI6 401 aa22.47■■□□□ 1.19
CAPN1-220ENST00000530567 SLC4A5Q9BY07 1137 aa22.47■■□□□ 1.19
CAPN1-220ENST00000530567 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.47■■□□□ 1.19
CAPN1-220ENST00000530567 GMIPQ9P107 970 aa22.47■■□□□ 1.19
CAPN1-220ENST00000530567 LUC7L2Q9Y383 392 aaKnown RBP22.47■■□□□ 1.19
CAPN1-220ENST00000530567 ZNF840PA6NDX5 716 aa22.46■■□□□ 1.19
CAPN1-220ENST00000530567 ZDHHC11BP0C7U3 371 aa22.46■■□□□ 1.19
CAPN1-220ENST00000530567 PRKCIP41743 596 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms