RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 PARVGQ9HBI0 331 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 BLOC1S4Q9NUP1 217 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 CACNA2D2Q9NY47 1150 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 AGO2Q9UKV8 859 aaKnown RBP11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 ZNF462Q96JM2 2506 aa11.43□□□□□ -0.58
TM9SF1-210ENST00000530563 MYO18AQ92614 2054 aaKnown RBP11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 IGHV1OR15-9A0A0B4J2B8 117 aa11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 A0A1W2PQF6 199 aa11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 SCAMP3O14828 347 aaKnown RBP11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 AP5Z1O43299 807 aa11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 ATP2C2O75185 946 aa11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 POLR2BP30876 1174 aaKnown RBP11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 PNPLA4P41247 253 aa11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 ATXN3P54252 364 aaPredicted RBP11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 RPL6Q02878 288 aaKnown RBP11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 SOWAHAQ2M3V2 549 aa11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 LMBRD2Q68DH5 695 aaPredicted RBP11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 GPBP1Q86WP2 473 aa11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 NT5DC4Q86YG4 428 aa11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 MIB1Q86YT6 1006 aa11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 SCN4BQ8IWT1 228 aa11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 ETFBKMTQ8IXQ9 262 aa11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 TMEM86AQ8N2M4 240 aa11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 HNRNPLLQ8WVV9 542 aaKnown RBP11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 ZNF560Q96MR9 790 aa11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 STRA6Q9BX79 667 aa11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 ARHGEF4Q9NR80 690 aa11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 BCCIPQ9P287 314 aaKnown RBP eCLIP11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 SIX4Q9UIU6 781 aa11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 CIZ1Q9ULV3 898 aaPredicted RBP11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 AGAP1Q9UPQ3 857 aa11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 RAXQ9Y2V3 346 aa11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 MYOFQ9NZM1 2061 aa11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 URB1O60287 2271 aaKnown RBP11.42□□□□□ -0.58
TM9SF1-210ENST00000530563 A0A1W2PQD8 194 aa11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 HUS1O60921 280 aa11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 PPP1R37O75864 691 aa11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 IL18RAPO95256 599 aa11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 OAS1P00973 400 aaKnown RBP11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 APODP05090 189 aa11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 ITGB3P05106 788 aa11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 LMO2P25791 158 aa11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 MYL7Q01449 175 aa11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 GNL2Q13823 731 aaKnown RBP11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 SLFN12LQ6IEE8 588 aa11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 GLRX5Q86SX6 157 aa11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 SPATA2LQ8IUW3 424 aaPredicted RBP11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 TOP6BLQ8N6T0 577 aa11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 LRRC52Q8N7C0 313 aa11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 ADAM32Q8TC27 787 aa11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 KBTBD7Q8WVZ9 684 aa11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 ZNF419Q96HQ0 510 aaPredicted RBP11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 ZFRQ96KR1 1074 aaKnown RBP11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 CEP295NLQ96MC4 621 aa11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 SCUBE2Q9NQ36 999 aa11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 CRTAC1Q9NQ79 661 aa11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 TMEM30AQ9NV96 361 aa11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 TRPM5Q9NZQ8 1165 aa11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 CALCOCO1Q9P1Z2 691 aa11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 DKK4Q9UBT3 224 aa11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 LIMCH1Q9UPQ0 1083 aa11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 CPQQ9Y646 472 aa11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 CEP192Q8TEP8 1941 aa11.41□□□□□ -0.58
TM9SF1-210ENST00000530563 VWA3AA6NCI4 1184 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 TRIM24O15164 1050 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 DKK1O94907 266 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 FAM13AO94988 1023 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 ADH5P11766 374 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 PLCG1P19174 1290 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 BDNFP23560 247 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 LHX1P48742 406 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 PDE6CP51160 858 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 NOP14P78316 857 aaKnown RBP11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 HMGN5P82970 282 aaKnown RBP11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 KDSRQ06136 332 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 KCNA1Q09470 495 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 RESTQ13127 1097 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 DHX8Q14562 1220 aaKnown RBP11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 MCM6Q14566 821 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 LY6G5CQ5SRR4 150 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 VSTM1Q6UX27 236 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 SLC36A4Q6YBV0 504 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 DENND5BQ6ZUT9 1274 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 ZNF720Q7Z2F6 126 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 RABEPKQ7Z6M1 372 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 NAXDQ8IW45 347 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 PGBD3Q8N328 593 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 KCNV2Q8TDN2 545 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 CD93Q9NPY3 652 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 SMPD4Q9NXE4 827 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 TOR4AQ9NXH8 423 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 KIAA1522Q9P206 1035 aaPredicted RBP11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 CFAP97Q9P2B7 532 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 SNX9Q9Y5X1 595 aa11.4□□□□□ -0.58
TM9SF1-210ENST00000530563 NAV2Q8IVL1 2488 aa11.4□□□□□ -0.59
TM9SF1-210ENST00000530563 PTPRBP23467 1997 aa11.39□□□□□ -0.59
TM9SF1-210ENST00000530563 SLC9A3R1O14745 358 aaPredicted RBP11.39□□□□□ -0.59
TM9SF1-210ENST00000530563 SLC26A4O43511 780 aa11.39□□□□□ -0.59
TM9SF1-210ENST00000530563 TULP3O75386 442 aa11.39□□□□□ -0.59
TM9SF1-210ENST00000530563 SEC24BO95487 1268 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms