RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 ZC3H10Q96K80 434 aaKnown RBP22.11■■□□□ 1.13
TSPAN4-219ENST00000530404 C7orf25Q9BPX7 421 aa22.11■■□□□ 1.13
TSPAN4-219ENST00000530404 TPSD1Q9BZJ3 242 aa22.11■■□□□ 1.13
TSPAN4-219ENST00000530404 SLC39A2Q9NP94 309 aa22.11■■□□□ 1.13
TSPAN4-219ENST00000530404 NXF1Q9UBU9 619 aaKnown RBP22.11■■□□□ 1.13
TSPAN4-219ENST00000530404 CPQQ9Y646 472 aa22.11■■□□□ 1.13
TSPAN4-219ENST00000530404 K7EQS6 105 aa22.1■■□□□ 1.13
TSPAN4-219ENST00000530404 FOXD2O60548 495 aaPredicted RBP22.1■■□□□ 1.13
TSPAN4-219ENST00000530404 TACC1O75410 805 aa22.1■■□□□ 1.13
TSPAN4-219ENST00000530404 AKAP3O75969 853 aa22.1■■□□□ 1.13
TSPAN4-219ENST00000530404 KRT37O76014 449 aa22.1■■□□□ 1.13
TSPAN4-219ENST00000530404 DGKEP52429 567 aa22.1■■□□□ 1.13
TSPAN4-219ENST00000530404 EHHADHQ08426 723 aa22.1■■□□□ 1.13
TSPAN4-219ENST00000530404 TAF10Q12962 218 aa22.1■■□□□ 1.13
TSPAN4-219ENST00000530404 PLA2G2CQ5R387 149 aa22.1■■□□□ 1.13
TSPAN4-219ENST00000530404 UNC13DQ70J99 1090 aa22.1■■□□□ 1.13
TSPAN4-219ENST00000530404 B3GNT5Q9BYG0 378 aa22.1■■□□□ 1.13
TSPAN4-219ENST00000530404 FRYQ5TBA9 3013 aa22.1■■□□□ 1.13
TSPAN4-219ENST00000530404 GON4LQ3T8J9 2241 aa22.1■■□□□ 1.13
TSPAN4-219ENST00000530404 UBE4BO95155 1302 aa22.09■■□□□ 1.13
TSPAN4-219ENST00000530404 A8MXQ7 604 aa22.09■■□□□ 1.13
TSPAN4-219ENST00000530404 YEATS4O95619 227 aa22.09■■□□□ 1.13
TSPAN4-219ENST00000530404 CYP17A1P05093 508 aa22.09■■□□□ 1.13
TSPAN4-219ENST00000530404 AFMP43652 599 aa22.09■■□□□ 1.13
TSPAN4-219ENST00000530404 PDE6CP51160 858 aa22.09■■□□□ 1.13
TSPAN4-219ENST00000530404 NOP14P78316 857 aaKnown RBP22.09■■□□□ 1.13
TSPAN4-219ENST00000530404 SLC7A9P82251 487 aa22.09■■□□□ 1.13
TSPAN4-219ENST00000530404 TRPC3Q13507 836 aa22.09■■□□□ 1.13
TSPAN4-219ENST00000530404 STPG1Q5TH74 334 aa22.09■■□□□ 1.13
TSPAN4-219ENST00000530404 CNNM4Q6P4Q7 775 aa22.09■■□□□ 1.13
TSPAN4-219ENST00000530404 GRAMD1CQ8IYS0 662 aa22.09■■□□□ 1.13
TSPAN4-219ENST00000530404 CCDC33Q8N5R6 958 aa22.09■■□□□ 1.13
TSPAN4-219ENST00000530404 PLEKHO2Q8TD55 490 aa22.09■■□□□ 1.13
TSPAN4-219ENST00000530404 USP33Q8TEY7 942 aa22.09■■□□□ 1.13
TSPAN4-219ENST00000530404 C8orf48Q96LL4 319 aa22.09■■□□□ 1.13
TSPAN4-219ENST00000530404 SMYD3Q9H7B4 428 aa22.09■■□□□ 1.13
TSPAN4-219ENST00000530404 CLSTN1O94985 981 aa22.08■■□□□ 1.13
TSPAN4-219ENST00000530404 GBP1P32455 592 aa22.08■■□□□ 1.13
TSPAN4-219ENST00000530404 SLC6A11P48066 632 aa22.08■■□□□ 1.13
TSPAN4-219ENST00000530404 LIMK1P53667 647 aa22.08■■□□□ 1.13
TSPAN4-219ENST00000530404 CDH8P55286 799 aa22.08■■□□□ 1.13
TSPAN4-219ENST00000530404 CREB5Q02930 508 aa22.08■■□□□ 1.13
TSPAN4-219ENST00000530404 MESP2Q0VG99 397 aa22.08■■□□□ 1.13
TSPAN4-219ENST00000530404 CUL4BQ13620 913 aa22.08■■□□□ 1.13
TSPAN4-219ENST00000530404 TDRD10Q5VZ19 366 aaKnown RBP22.08■■□□□ 1.13
TSPAN4-219ENST00000530404 SCARA5Q6ZMJ2 495 aa22.08■■□□□ 1.13
TSPAN4-219ENST00000530404 B3GALNT2Q8NCR0 500 aa22.08■■□□□ 1.13
TSPAN4-219ENST00000530404 TSTD1Q8NFU3 115 aa22.08■■□□□ 1.13
TSPAN4-219ENST00000530404 CEP295NLQ96MC4 621 aa22.08■■□□□ 1.13
TSPAN4-219ENST00000530404 BACH2Q9BYV9 841 aa22.08■■□□□ 1.13
TSPAN4-219ENST00000530404 CFAP97Q9P2B7 532 aa22.08■■□□□ 1.13
TSPAN4-219ENST00000530404 EBF1Q9UH73 591 aa22.08■■□□□ 1.13
TSPAN4-219ENST00000530404 PCDHGA5Q9Y5G8 931 aa22.08■■□□□ 1.13
TSPAN4-219ENST00000530404 PHACTR2O75167 634 aa22.07■■□□□ 1.12
TSPAN4-219ENST00000530404 OAS1P00973 400 aaKnown RBP22.07■■□□□ 1.12
TSPAN4-219ENST00000530404 MBL2P11226 248 aaPredicted RBP22.07■■□□□ 1.12
TSPAN4-219ENST00000530404 PFKLP17858 780 aa22.07■■□□□ 1.12
TSPAN4-219ENST00000530404 DHCR24Q15392 516 aa22.07■■□□□ 1.12
TSPAN4-219ENST00000530404 C12orf40Q86WS4 652 aa22.07■■□□□ 1.12
TSPAN4-219ENST00000530404 TTC30AQ86WT1 665 aa22.07■■□□□ 1.12
TSPAN4-219ENST00000530404 ELOVL4Q9GZR5 314 aa22.07■■□□□ 1.12
TSPAN4-219ENST00000530404 XYLT2Q9H1B5 865 aa22.07■■□□□ 1.12
TSPAN4-219ENST00000530404 EHD2Q9NZN4 543 aa22.07■■□□□ 1.12
TSPAN4-219ENST00000530404 TM4SF5O14894 197 aa22.06■■□□□ 1.12
TSPAN4-219ENST00000530404 EXOC3O60645 756 aa22.06■■□□□ 1.12
TSPAN4-219ENST00000530404 OLFM2O95897 454 aa22.06■■□□□ 1.12
TSPAN4-219ENST00000530404 BCKDHBP21953 392 aa22.06■■□□□ 1.12
TSPAN4-219ENST00000530404 ELF2Q15723 593 aa22.06■■□□□ 1.12
TSPAN4-219ENST00000530404 N4BP2L1Q5TBK1 243 aaPredicted RBP22.06■■□□□ 1.12
TSPAN4-219ENST00000530404 ANO7Q6IWH7 933 aa22.06■■□□□ 1.12
TSPAN4-219ENST00000530404 ADGRG2Q8IZP9 1017 aa22.06■■□□□ 1.12
TSPAN4-219ENST00000530404 FBXO32Q969P5 355 aa22.06■■□□□ 1.12
TSPAN4-219ENST00000530404 SLITRK1Q96PX8 696 aa22.06■■□□□ 1.12
TSPAN4-219ENST00000530404 KCNK16Q96T55 309 aa22.06■■□□□ 1.12
TSPAN4-219ENST00000530404 ZDHHC4Q9NPG8 344 aa22.06■■□□□ 1.12
TSPAN4-219ENST00000530404 VPS45Q9NRW7 570 aa22.06■■□□□ 1.12
TSPAN4-219ENST00000530404 PCDHA7Q9UN72 937 aa22.06■■□□□ 1.12
TSPAN4-219ENST00000530404 ASCC3Q8N3C0 2202 aaKnown RBP22.05■■□□□ 1.12
TSPAN4-219ENST00000530404 RHOBTB1O94844 696 aa22.05■■□□□ 1.12
TSPAN4-219ENST00000530404 HNRNPLP14866 589 aaKnown RBP eCLIP22.05■■□□□ 1.125e-7■□□□□ 11.2
TSPAN4-219ENST00000530404 PPP3CCP48454 512 aa22.05■■□□□ 1.12
TSPAN4-219ENST00000530404 KDSRQ06136 332 aa22.05■■□□□ 1.12
TSPAN4-219ENST00000530404 BIRC3Q13489 604 aa22.05■■□□□ 1.12
TSPAN4-219ENST00000530404 BMT2Q1RMZ1 405 aa22.05■■□□□ 1.12
TSPAN4-219ENST00000530404 NUP93Q8N1F7 819 aa22.05■■□□□ 1.12
TSPAN4-219ENST00000530404 SCAMP5Q8TAC9 235 aa22.05■■□□□ 1.12
TSPAN4-219ENST00000530404 DDX1Q92499 740 aaKnown RBP22.05■■□□□ 1.12
TSPAN4-219ENST00000530404 SYAP1Q96A49 352 aaPredicted RBP22.05■■□□□ 1.12
TSPAN4-219ENST00000530404 MED10Q9BTT4 135 aa22.05■■□□□ 1.12
TSPAN4-219ENST00000530404 SDCBP2Q9H190 292 aa22.05■■□□□ 1.12
TSPAN4-219ENST00000530404 MAGEF1Q9HAY2 307 aa22.05■■□□□ 1.12
TSPAN4-219ENST00000530404 MMP17Q9ULZ9 603 aa22.05■■□□□ 1.12
TSPAN4-219ENST00000530404 USP24Q9UPU5 2620 aa22.05■■□□□ 1.12
TSPAN4-219ENST00000530404 LRRIQ3A6PVS8 624 aaPredicted RBP22.04■■□□□ 1.12
TSPAN4-219ENST00000530404 STAU1O95793 577 aaKnown RBP22.04■■□□□ 1.12
TSPAN4-219ENST00000530404 YWHAQP27348 245 aa22.04■■□□□ 1.12
TSPAN4-219ENST00000530404 TIE1P35590 1138 aa22.04■■□□□ 1.12
TSPAN4-219ENST00000530404 SNRPFP62306 86 aaKnown RBP22.04■■□□□ 1.12
TSPAN4-219ENST00000530404 KNOP1Q1ED39 458 aaKnown RBP22.04■■□□□ 1.12
TSPAN4-219ENST00000530404 ZNF699Q32M78 642 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms