RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 F9P00740 461 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 SERPINB1P30740 379 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 DEFA1P59665 94 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 DEFA3P59666 94 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 IRGCQ6NXR0 463 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 NIPA1Q7RTP0 329 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 PATL1Q86TB9 770 aaKnown RBP15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 DNAAF5Q86Y56 855 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 STKLD1Q8NE28 680 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 MYOZ2Q9NPC6 264 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 DNAJC16Q9Y2G8 782 aa15.99■□□□□ 0.15
PCDHA4-203ENST00000530339 ITGB3BPQ13352 177 aaPredicted RBP15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 KRT72Q14CN4 511 aa15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 CRELD2Q6UXH1 353 aaPredicted RBP15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 SPOCD1Q6ZMY3 1216 aa15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 WNK4Q96J92 1243 aa15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 ADGRA3Q8IWK6 1321 aa15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 KCNK10P57789 538 aa15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 RPS6P62753 249 aaKnown RBP15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 TRIM16LQ309B1 348 aa15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 C2CD6Q53TS8 623 aa15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 PCDH9Q9HC56 1237 aa15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 GNL1P36915 607 aaPredicted RBP15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 USP13Q92995 863 aaPredicted RBP15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 MAML3Q96JK9 1138 aa15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 TMEM121Q9BTD3 319 aa15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 RPS6KL1Q9Y6S9 549 aa15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 CCDC159P0C7I6 412 aa15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 PSMA4P25789 261 aaKnown RBP15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 CAP2P40123 477 aa15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 GEMP55040 296 aa15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 DMC1Q14565 340 aa15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 USP33Q8TEY7 942 aa15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 NMD3Q96D46 503 aaKnown RBP15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 RTFDC1Q9BY42 306 aaPredicted RBP15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 DCLK3Q9C098 648 aa15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 SAR1AQ9NR31 198 aa15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 SCN3BQ9NY72 215 aa15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 SLC30A1Q9Y6M5 507 aa15.98■□□□□ 0.15
PCDHA4-203ENST00000530339 TCRBV5S4A2TA0A5A2 114 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 DDX3XO00571 662 aaKnown RBP eCLIP15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 FAM200BP0CF97 657 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 BMP6P22004 513 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 ZC3H12BQ5HYM0 836 aaKnown RBP15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 SERPINB5P36952 375 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 SLC47A2Q86VL8 602 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 WDR49Q8IV35 697 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 MFN1Q8IWA4 741 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 USP6NLQ92738 828 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 SLC5A5Q92911 643 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 SATB2Q9UPW6 733 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 SIK3Q9Y2K2 1263 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 A0A0U1RQJ8 604 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 TIMM44O43615 452 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 EPHB2P29323 1055 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 CLK1P49759 484 aaKnown RBP15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 ANKS3Q6ZW76 656 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 SHCBP1Q8NEM2 672 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 UBA3Q8TBC4 463 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 INPP5DQ92835 1189 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 VCPIP1Q96JH7 1222 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 LRRC4BQ9NT99 713 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 TMX2Q9Y320 296 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 SLCO1B7G3V0H7 640 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 ZNF263O14978 683 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 IL1R1P14778 569 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 CPT1AP50416 773 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 CLEC16AQ2KHT3 1053 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 FAM83EQ2M2I3 478 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 UGT3A1Q6NUS8 523 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 MPZL3Q6UWV2 235 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 SZRD1Q7Z422 152 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 TMEM237Q96Q45 408 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 IL1RL2Q9HB29 575 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 NINJ2Q9NZG7 142 aa15.97■□□□□ 0.15
PCDHA4-203ENST00000530339 SNX3O60493 162 aa15.96■□□□□ 0.15
PCDHA4-203ENST00000530339 ATP5BP06576 529 aaKnown RBP15.96■□□□□ 0.15
PCDHA4-203ENST00000530339 SUPT20HL2P0C7V6 817 aa15.96■□□□□ 0.15
PCDHA4-203ENST00000530339 CHRNA5P30532 468 aa15.96■□□□□ 0.15
PCDHA4-203ENST00000530339 HUNKP57058 714 aa15.96■□□□□ 0.15
PCDHA4-203ENST00000530339 GPRC5AQ8NFJ5 357 aa15.96■□□□□ 0.15
PCDHA4-203ENST00000530339 AGBL1Q96MI9 1066 aa15.96■□□□□ 0.15
PCDHA4-203ENST00000530339 TAAR1Q96RJ0 339 aa15.96■□□□□ 0.15
PCDHA4-203ENST00000530339 FAM49BQ9NUQ9 324 aa15.96■□□□□ 0.15
PCDHA4-203ENST00000530339 AAR2Q9Y312 384 aaKnown RBP15.96■□□□□ 0.15
PCDHA4-203ENST00000530339 SDR42E2A6NKP2 422 aa15.96■□□□□ 0.15
PCDHA4-203ENST00000530339 FCHO1O14526 889 aa15.96■□□□□ 0.15
PCDHA4-203ENST00000530339 FBXO21O94952 628 aa15.96■□□□□ 0.15
PCDHA4-203ENST00000530339 RARAP10276 462 aa15.96■□□□□ 0.15
PCDHA4-203ENST00000530339 PYGMP11217 842 aa15.96■□□□□ 0.15
PCDHA4-203ENST00000530339 RALBP11234 206 aa15.96■□□□□ 0.15
PCDHA4-203ENST00000530339 SWT1Q5T5J6 900 aaKnown RBP15.96■□□□□ 0.15
PCDHA4-203ENST00000530339 PNMA5Q96PV4 448 aa15.96■□□□□ 0.15
PCDHA4-203ENST00000530339 MYLK2Q9H1R3 596 aa15.96■□□□□ 0.15
PCDHA4-203ENST00000530339 PCDHA3Q9Y5H8 950 aa15.96■□□□□ 0.15
PCDHA4-203ENST00000530339 DNALI1O14645 258 aaPredicted RBP15.96■□□□□ 0.15
PCDHA4-203ENST00000530339 TPST1O60507 370 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms