RNA–Protein interactions for RNA: ENST00000530131.5

RDX-209, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 1,911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-209ENST00000530131 POLNQ7Z5Q5 900 aa16.04■□□□□ 0.16
RDX-209ENST00000530131 EXD1Q8NHP7 514 aa16.04■□□□□ 0.16
RDX-209ENST00000530131 COLEC11Q9BWP8 271 aa16.04■□□□□ 0.16
RDX-209ENST00000530131 UBXN6Q9BZV1 441 aa16.04■□□□□ 0.16
RDX-209ENST00000530131 RC3H2Q9HBD1 1191 aaKnown RBP16.04■□□□□ 0.16
RDX-209ENST00000530131 FAN1Q9Y2M0 1017 aa16.04■□□□□ 0.16
RDX-209ENST00000530131 TCRBV7S2A1N4TA0A589 114 aa16.03■□□□□ 0.16
RDX-209ENST00000530131 FSCN2O14926 492 aa16.03■□□□□ 0.16
RDX-209ENST00000530131 EFEMP2O95967 443 aa16.03■□□□□ 0.16
RDX-209ENST00000530131 FGFR3P22607 806 aa16.03■□□□□ 0.16
RDX-209ENST00000530131 IL1R2P27930 398 aa16.03■□□□□ 0.16
RDX-209ENST00000530131 SSR1P43307 286 aaKnown RBP16.03■□□□□ 0.16
RDX-209ENST00000530131 TSPY1Q01534 308 aa16.03■□□□□ 0.16
RDX-209ENST00000530131 SIX1Q15475 284 aaPredicted RBP16.03■□□□□ 0.16
RDX-209ENST00000530131 MAPRE1Q15691 268 aaKnown RBP16.03■□□□□ 0.16
RDX-209ENST00000530131 CCDC14Q49A88 953 aa16.03■□□□□ 0.16
RDX-209ENST00000530131 ATP13A4Q4VNC1 1196 aa16.03■□□□□ 0.16
RDX-209ENST00000530131 GPRIN1Q7Z2K8 1008 aa16.03■□□□□ 0.16
RDX-209ENST00000530131 TMEM173Q86WV6 379 aaPredicted RBP16.03■□□□□ 0.16
RDX-209ENST00000530131 BCL7CQ8WUZ0 217 aaPredicted RBP16.03■□□□□ 0.16
RDX-209ENST00000530131 TOP1MTQ969P6 601 aa16.03■□□□□ 0.16
RDX-209ENST00000530131 KCNK16Q96T55 309 aa16.03■□□□□ 0.16
RDX-209ENST00000530131 KRT12Q99456 494 aa16.03■□□□□ 0.16
RDX-209ENST00000530131 HERPUD2Q9BSE4 406 aa16.03■□□□□ 0.16
RDX-209ENST00000530131 MCOLN1Q9GZU1 580 aa16.03■□□□□ 0.16
RDX-209ENST00000530131 ZCWPW1Q9H0M4 648 aa16.03■□□□□ 0.16
RDX-209ENST00000530131 CWH43Q9H720 699 aa16.03■□□□□ 0.16
RDX-209ENST00000530131 COL4A4P53420 1690 aaPredicted RBP16.03■□□□□ 0.16
RDX-209ENST00000530131 UPP2O95045 317 aa16.02■□□□□ 0.16
RDX-209ENST00000530131 RAG1P15918 1043 aa16.02■□□□□ 0.16
RDX-209ENST00000530131 PCK1P35558 622 aa16.02■□□□□ 0.16
RDX-209ENST00000530131 GJC1P36383 396 aa16.02■□□□□ 0.16
RDX-209ENST00000530131 PBX3P40426 434 aa16.02■□□□□ 0.16
RDX-209ENST00000530131 RABGGTBP53611 331 aa16.02■□□□□ 0.16
RDX-209ENST00000530131 C15orf59Q2T9L4 293 aaPredicted RBP16.02■□□□□ 0.16
RDX-209ENST00000530131 GLE1Q53GS7 698 aaKnown RBP16.02■□□□□ 0.16
RDX-209ENST00000530131 RAB6CQ53S08 254 aa16.02■□□□□ 0.16
RDX-209ENST00000530131 VARS2Q5ST30 1063 aaKnown RBP16.02■□□□□ 0.16
RDX-209ENST00000530131 SH3PXD2AQ5TCZ1 1133 aa16.02■□□□□ 0.16
RDX-209ENST00000530131 CYP4V2Q6ZWL3 525 aaPredicted RBP16.02■□□□□ 0.16
RDX-209ENST00000530131 ANKS1BQ7Z6G8 1248 aa16.02■□□□□ 0.16
RDX-209ENST00000530131 HDAC7Q8WUI4 952 aa16.02■□□□□ 0.16
RDX-209ENST00000530131 C11orf84Q9BUA3 381 aaPredicted RBP16.02■□□□□ 0.16
RDX-209ENST00000530131 PLVAPQ9BX97 442 aa16.02■□□□□ 0.16
RDX-209ENST00000530131 RAB6CQ9H0N0 254 aa16.02■□□□□ 0.16
RDX-209ENST00000530131 ASNSD1Q9NWL6 643 aa16.02■□□□□ 0.16
RDX-209ENST00000530131 PCDH10Q9P2E7 1040 aa16.02■□□□□ 0.16
RDX-209ENST00000530131 SF3B1O75533 1304 aaKnown RBP eCLIP16.02■□□□□ 0.152e-6■■■■■ 103.4
RDX-209ENST00000530131 BDNFP23560 247 aa16.02■□□□□ 0.15
RDX-209ENST00000530131 PTPN9P43378 593 aa16.02■□□□□ 0.15
RDX-209ENST00000530131 NDUFV1P49821 464 aa16.02■□□□□ 0.15
RDX-209ENST00000530131 DEFB103AP81534 67 aa16.02■□□□□ 0.15
RDX-209ENST00000530131 MRPS5P82675 430 aaKnown RBP16.02■□□□□ 0.15
RDX-209ENST00000530131 FAM171A1Q5VUB5 890 aa16.02■□□□□ 0.15
RDX-209ENST00000530131 C8orf74Q6P047 294 aa16.02■□□□□ 0.15
RDX-209ENST00000530131 WDR93Q6P2C0 686 aa16.02■□□□□ 0.15
RDX-209ENST00000530131 FUT10Q6P4F1 479 aa16.02■□□□□ 0.15
RDX-209ENST00000530131 ADAT2Q7Z6V5 191 aaKnown RBP16.02■□□□□ 0.15
RDX-209ENST00000530131 KLHL7Q8IXQ5 586 aa16.02■□□□□ 0.15
RDX-209ENST00000530131 ZNF689Q96CS4 500 aaPredicted RBP16.02■□□□□ 0.15
RDX-209ENST00000530131 CFAP57Q96MR6 1250 aa16.02■□□□□ 0.15
RDX-209ENST00000530131 ADAM33Q9BZ11 813 aa16.02■□□□□ 0.15
RDX-209ENST00000530131 DDX47Q9H0S4 455 aaKnown RBP16.02■□□□□ 0.15
RDX-209ENST00000530131 DMGDHQ9UI17 866 aaKnown RBP16.02■□□□□ 0.15
RDX-209ENST00000530131 NT5C1B-RDH14C9J2C7 533 aa16.01■□□□□ 0.15
RDX-209ENST00000530131 ZRANB2O95218 330 aaKnown RBP eCLIP16.01■□□□□ 0.15
RDX-209ENST00000530131 OR4Q2P0C623 313 aa16.01■□□□□ 0.15
RDX-209ENST00000530131 MIPP30301 263 aa16.01■□□□□ 0.15
RDX-209ENST00000530131 TKTL1P51854 596 aa16.01■□□□□ 0.15
RDX-209ENST00000530131 WDR5P61964 334 aaKnown RBP16.01■□□□□ 0.15
RDX-209ENST00000530131 VSNL1P62760 191 aa16.01■□□□□ 0.15
RDX-209ENST00000530131 MRPS25P82663 173 aaKnown RBP16.01■□□□□ 0.15
RDX-209ENST00000530131 EFHC1Q5JVL4 640 aa16.01■□□□□ 0.15
RDX-209ENST00000530131 TMEM199Q8N511 208 aa16.01■□□□□ 0.15
RDX-209ENST00000530131 PRELID2Q8N945 189 aa16.01■□□□□ 0.15
RDX-209ENST00000530131 NDRG1Q92597 394 aaKnown RBP16.01■□□□□ 0.15
RDX-209ENST00000530131 SLITRK1Q96PX8 696 aa16.01■□□□□ 0.15
RDX-209ENST00000530131 PEBP4Q96S96 227 aa16.01■□□□□ 0.15
RDX-209ENST00000530131 LRRC4Q9HBW1 653 aa16.01■□□□□ 0.15
RDX-209ENST00000530131 KLHL11Q9NVR0 708 aa16.01■□□□□ 0.15
RDX-209ENST00000530131 DDX56Q9NY93 547 aaKnown RBP16.01■□□□□ 0.15
RDX-209ENST00000530131 C3orf70A6NLC5 250 aaPredicted RBP16■□□□□ 0.15
RDX-209ENST00000530131 SART1O43290 800 aaKnown RBP16■□□□□ 0.15
RDX-209ENST00000530131 RAD51CO43502 376 aa16■□□□□ 0.15
RDX-209ENST00000530131 HSF2BPO75031 334 aa16■□□□□ 0.15
RDX-209ENST00000530131 RNF8O76064 485 aa16■□□□□ 0.15
RDX-209ENST00000530131 FBXO21O94952 628 aa16■□□□□ 0.15
RDX-209ENST00000530131 KRT1P04264 644 aa16■□□□□ 0.15
RDX-209ENST00000530131 EN2P19622 333 aaPredicted RBP16■□□□□ 0.15
RDX-209ENST00000530131 SDC4P31431 198 aa16■□□□□ 0.15
RDX-209ENST00000530131 PTPN7P35236 360 aa16■□□□□ 0.15
RDX-209ENST00000530131 ELAVL2Q12926 359 aaKnown RBP16■□□□□ 0.15
RDX-209ENST00000530131 KLF1Q13351 362 aaPredicted RBP16■□□□□ 0.15
RDX-209ENST00000530131 CYP1B1Q16678 543 aa16■□□□□ 0.15
RDX-209ENST00000530131 SLC39A12Q504Y0 691 aa16■□□□□ 0.15
RDX-209ENST00000530131 RCOR2Q8IZ40 523 aa16■□□□□ 0.15
RDX-209ENST00000530131 SIX6OS1Q8N1H7 587 aa16■□□□□ 0.15
RDX-209ENST00000530131 RAPGEF5Q92565 580 aa16■□□□□ 0.15
RDX-209ENST00000530131 CENPIQ92674 756 aaPredicted RBP16■□□□□ 0.15
RDX-209ENST00000530131 RBM41Q96IZ5 413 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms