RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 CPNE8Q86YQ8 564 aa15.17■□□□□ 0.02
TTC39A-216ENST00000530004 B3GALNT2Q8NCR0 500 aa15.17■□□□□ 0.02
TTC39A-216ENST00000530004 C3orf20Q8ND61 904 aa15.17■□□□□ 0.02
TTC39A-216ENST00000530004 OR10T2Q8NGX3 314 aa15.17■□□□□ 0.02
TTC39A-216ENST00000530004 GDPD5Q8WTR4 605 aa15.17■□□□□ 0.02
TTC39A-216ENST00000530004 ENTPD7Q9NQZ7 604 aa15.17■□□□□ 0.02
TTC39A-216ENST00000530004 ST7Q9NRC1 585 aa15.17■□□□□ 0.02
TTC39A-216ENST00000530004 SSX2IPQ9Y2D8 614 aa15.17■□□□□ 0.02
TTC39A-216ENST00000530004 BACE2Q9Y5Z0 518 aa15.17■□□□□ 0.02
TTC39A-216ENST00000530004 IRAK3Q9Y616 596 aa15.17■□□□□ 0.02
TTC39A-216ENST00000530004 GOLGA8SH3BPF8 625 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 FSCN2O14926 492 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 CEP104O60308 925 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 CSPG5O95196 566 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 ADORA2BP29275 332 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 IRS1P35568 1242 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 GABRB2P47870 512 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 RPL7AP62424 266 aaKnown RBP15.16■□□□□ 0.02
TTC39A-216ENST00000530004 XYLT1Q86Y38 959 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 UBL4BQ8N7F7 174 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 IPO4Q8TEX9 1081 aaKnown RBP15.16■□□□□ 0.02
TTC39A-216ENST00000530004 RPGRIP1Q96KN7 1286 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 MCEEQ96PE7 176 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 SELENOOQ9BVL4 669 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 OXCT2Q9BYC2 517 aaPredicted RBP15.16■□□□□ 0.02
TTC39A-216ENST00000530004 LMAN2LQ9H0V9 348 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 TTYH1Q9H313 450 aaPredicted RBP15.16■□□□□ 0.02
TTC39A-216ENST00000530004 NGRNQ9NPE2 291 aaKnown RBP15.16■□□□□ 0.02
TTC39A-216ENST00000530004 WDR35Q9P2L0 1181 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 CDH9Q9ULB4 789 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 VWA8A3KMH1 1905 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 PLXNA4Q9HCM2 1894 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 OR6C75A6NL08 312 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 RFXAPO00287 272 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 TULP2O00295 520 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 LPXNO60711 386 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 ATP2C2O75185 946 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 PROSCO94903 275 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 CXCL14O95715 111 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 SETSIPP0DME0 302 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 GSCP56915 257 aaPredicted RBP15.16■□□□□ 0.02
TTC39A-216ENST00000530004 SMC1AQ14683 1233 aaKnown RBP15.16■□□□□ 0.02
TTC39A-216ENST00000530004 INTS6LQ5JSJ4 861 aaKnown RBP15.16■□□□□ 0.02
TTC39A-216ENST00000530004 PPP1R15BQ5SWA1 713 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 SLC8B1Q6J4K2 584 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 DCUN1D2Q6PH85 259 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 RSPO2Q6UXX9 243 aaPredicted RBP15.16■□□□□ 0.02
TTC39A-216ENST00000530004 ZNF572Q7Z3I7 529 aaPredicted RBP15.16■□□□□ 0.02
TTC39A-216ENST00000530004 MRPL43Q8N983 215 aaKnown RBP15.16■□□□□ 0.02
TTC39A-216ENST00000530004 SLC2A14Q8TDB8 520 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 MICAL1Q8TDZ2 1067 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 UBE2Q2Q8WVN8 375 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 KRT35Q92764 455 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 CD101Q93033 1021 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 LRCH3Q96II8 777 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 TMEM209Q96SK2 561 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 SYT15Q9BQS2 421 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 CLSTN3Q9BQT9 956 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 RXFP1Q9HBX9 757 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.16■□□□□ 0.02
TTC39A-216ENST00000530004 CDY1Q9Y6F8 540 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 TSC2P49815 1807 aa15.16■□□□□ 0.02
TTC39A-216ENST00000530004 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.15■□□□□ 0.02
TTC39A-216ENST00000530004 TMEM191CA6NGB0 347 aa15.15■□□□□ 0.02
TTC39A-216ENST00000530004 PIK3R2O00459 728 aa15.15■□□□□ 0.02
TTC39A-216ENST00000530004 PTPN1P18031 435 aaKnown RBP15.15■□□□□ 0.02
TTC39A-216ENST00000530004 RPL17P18621 184 aaKnown RBP15.15■□□□□ 0.02
TTC39A-216ENST00000530004 CA8P35219 290 aa15.15■□□□□ 0.02
TTC39A-216ENST00000530004 CTNNA1P35221 906 aaKnown RBP15.15■□□□□ 0.02
TTC39A-216ENST00000530004 SLC1A1P43005 524 aa15.15■□□□□ 0.02
TTC39A-216ENST00000530004 MARCKSL1P49006 195 aa15.15■□□□□ 0.02
TTC39A-216ENST00000530004 RGS7P49802 495 aa15.15■□□□□ 0.02
TTC39A-216ENST00000530004 RNASE9P60153 205 aaKnown RBP15.15■□□□□ 0.02
TTC39A-216ENST00000530004 CREMQ03060 361 aa15.15■□□□□ 0.02
TTC39A-216ENST00000530004 PDE4CQ08493 712 aa15.15■□□□□ 0.02
TTC39A-216ENST00000530004 C2orf54Q08AI8 447 aa15.15■□□□□ 0.02
TTC39A-216ENST00000530004 ZNF268Q14587 947 aaPredicted RBP15.15■□□□□ 0.02
TTC39A-216ENST00000530004 CCDC142Q17RM4 750 aa15.15■□□□□ 0.02
TTC39A-216ENST00000530004 DCAF12L1Q5VU92 463 aa15.15■□□□□ 0.02
TTC39A-216ENST00000530004 PLPP4Q5VZY2 271 aa15.15■□□□□ 0.02
TTC39A-216ENST00000530004 PDE12Q6L8Q7 609 aaKnown RBP15.15■□□□□ 0.02
TTC39A-216ENST00000530004 ANKRD52Q8NB46 1076 aa15.15■□□□□ 0.02
TTC39A-216ENST00000530004 NOA1Q8NC60 698 aaKnown RBP15.15■□□□□ 0.02
TTC39A-216ENST00000530004 SPATA4Q8NEY3 305 aa15.15■□□□□ 0.02
TTC39A-216ENST00000530004 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.15■□□□□ 0.02
TTC39A-216ENST00000530004 SLC35F5Q8WV83 523 aa15.15■□□□□ 0.02
TTC39A-216ENST00000530004 ZCWPW1Q9H0M4 648 aa15.15■□□□□ 0.02
TTC39A-216ENST00000530004 CARD9Q9H257 536 aa15.15■□□□□ 0.02
TTC39A-216ENST00000530004 CRTAC1Q9NQ79 661 aa15.15■□□□□ 0.02
TTC39A-216ENST00000530004 FNIP2Q9P278 1114 aa15.15■□□□□ 0.02
TTC39A-216ENST00000530004 IP6K2Q9UHH9 426 aa15.15■□□□□ 0.02
TTC39A-216ENST00000530004 MYBPHLA2RUH7 354 aa15.14■□□□□ 0.01
TTC39A-216ENST00000530004 C2orf71A6NGG8 1288 aa15.14■□□□□ 0.01
TTC39A-216ENST00000530004 SIGLEC16A6NMB1 481 aa15.14■□□□□ 0.01
TTC39A-216ENST00000530004 HIDE1A8MVS5 230 aa15.14■□□□□ 0.01
TTC39A-216ENST00000530004 E5RJQ4 531 aa15.14■□□□□ 0.01
TTC39A-216ENST00000530004 ADAM12O43184 909 aa15.14■□□□□ 0.01
TTC39A-216ENST00000530004 CNPP09543 421 aaKnown RBP15.14■□□□□ 0.01
TTC39A-216ENST00000530004 OR4Q2P0C623 313 aa15.14■□□□□ 0.01
TTC39A-216ENST00000530004 KRT3P12035 628 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms