RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 TRIM16O95361 564 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 NFATC1O95644 943 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 ABL1P00519 1130 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 MUTP22033 750 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 GUCY2CP25092 1073 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 NCKAP1LP55160 1127 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 WNT7BP56706 349 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 PSMC1P62191 440 aaKnown RBP3.78□□□□□ -1.8
PTPRC-213ENST00000529828 ATP2C1P98194 919 aaPredicted RBP3.78□□□□□ -1.8
PTPRC-213ENST00000529828 RESTQ13127 1097 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 NR1H3Q13133 447 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 TRIP6Q15654 476 aaKnown RBP3.78□□□□□ -1.8
PTPRC-213ENST00000529828 CCDC157Q569K6 752 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 OSTM1Q86WC4 334 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 CCDC83Q8IWF9 413 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 DCP1BQ8IZD4 617 aaKnown RBP3.78□□□□□ -1.8
PTPRC-213ENST00000529828 PDCL2Q8N4E4 241 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 NAT16Q8N8M0 369 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 IGSF22Q8N9C0 903 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 ADAM32Q8TC27 787 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 C2orf15Q8WU43 125 aaKnown RBP3.78□□□□□ -1.8
PTPRC-213ENST00000529828 C8orf76Q96K31 380 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 HSPA12BQ96MM6 686 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 ZHX3Q9H4I2 956 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 POLMQ9NP87 494 aaPredicted RBP3.78□□□□□ -1.8
PTPRC-213ENST00000529828 ARHGEF4Q9NR80 690 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 DDX43Q9NXZ2 648 aaKnown RBP3.78□□□□□ -1.8
PTPRC-213ENST00000529828 DPP3Q9NY33 737 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 GCNT4Q9P109 453 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 CALCOCO1Q9P1Z2 691 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 CPSF3Q9UKF6 684 aaKnown RBP3.78□□□□□ -1.8
PTPRC-213ENST00000529828 GTF3C4Q9UKN8 822 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 DSEQ9UL01 958 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 L1RE1Q9UN81 338 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 OBSL1O75147 1896 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 ZNF638Q14966 1978 aaKnown RBP3.78□□□□□ -1.8
PTPRC-213ENST00000529828 SCN1AP35498 2009 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 FAM149AA5PLN7 773 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 KPNA7A9QM74 516 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 ST8SIA5O15466 376 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 ATP2C2O75185 946 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 CLSTN1O94985 981 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 KAT7O95251 611 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 AVPP01185 164 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 APODP05090 189 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 ITGB3P05106 788 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 SERPINF2P08697 491 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 PLA2G4BP0C869 781 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 HDCP19113 662 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 MAOBP27338 520 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 POLR2BP30876 1174 aaKnown RBP3.78□□□□□ -1.8
PTPRC-213ENST00000529828 RDXP35241 583 aaKnown RBP3.78□□□□□ -1.8
PTPRC-213ENST00000529828 TOB1P50616 345 aaPredicted RBP3.78□□□□□ -1.8
PTPRC-213ENST00000529828 SLC12A3P55017 1021 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 USP46P62068 366 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 ZNF33AQ06730 810 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 IFRD2Q12894 506 aaPredicted RBP3.78□□□□□ -1.8
PTPRC-213ENST00000529828 PDIA5Q14554 519 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 ANKRD1Q15327 319 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 DHCR24Q15392 516 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 DUOXA1Q1HG43 343 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 ZNF423Q2M1K9 1284 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 SV2CQ496J9 727 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 ARSHQ5FYA8 562 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 INTS6LQ5JSJ4 861 aaKnown RBP3.78□□□□□ -1.8
PTPRC-213ENST00000529828 LMBRD2Q68DH5 695 aaPredicted RBP3.78□□□□□ -1.8
PTPRC-213ENST00000529828 ADALQ6DHV7 355 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 CCNI2Q6ZMN8 369 aaPredicted RBP3.78□□□□□ -1.8
PTPRC-213ENST00000529828 SLCO6A1Q86UG4 719 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 MIB1Q86YT6 1006 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 SPATA2LQ8IUW3 424 aaPredicted RBP3.78□□□□□ -1.8
PTPRC-213ENST00000529828 SLC41A1Q8IVJ1 513 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 NAXDQ8IW45 347 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 RGL4Q8IZJ4 473 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 MYCT1Q8N699 235 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 TRIML1Q8N9V2 468 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 ZSWIM2Q8NEG5 633 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 SPATA18Q8TC71 538 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 NOC3LQ8WTT2 800 aaKnown RBP3.78□□□□□ -1.8
PTPRC-213ENST00000529828 MYLPFQ96A32 169 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 PNKPQ96T60 521 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 REEP2Q9BRK0 252 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 NTPCRQ9BSD7 190 aaKnown RBP3.78□□□□□ -1.8
PTPRC-213ENST00000529828 RAB34Q9BZG1 259 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 TMEM206Q9H813 350 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 C17orf75Q9HAS0 396 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 IL21RQ9HBE5 538 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 CAPN10Q9HC96 672 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 CFAP97Q9P2B7 532 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 UXTQ9UBK9 157 aaPredicted RBP3.78□□□□□ -1.8
PTPRC-213ENST00000529828 ZMYM5Q9UJ78 669 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 NOL7Q9UMY1 257 aaKnown RBP3.78□□□□□ -1.8
PTPRC-213ENST00000529828 PCDHB9Q9Y5E1 797 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 CPQQ9Y646 472 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 PI4KAP42356 2102 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 URB1O60287 2271 aaKnown RBP3.77□□□□□ -1.81
PTPRC-213ENST00000529828 PCDH15Q96QU1 1955 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 TNRC6BQ9UPQ9 1833 aaKnown RBP3.77□□□□□ -1.81
PTPRC-213ENST00000529828 A0A0B4J269 797 aa3.77□□□□□ -1.81
PTPRC-213ENST00000529828 IGHV1OR15-9A0A0B4J2B8 117 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms