RNA–Protein interactions for RNA: ENST00000529565.1

CASP4-207, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 4,745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-207ENST00000529565 IKBKEQ14164 716 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 NAA30Q147X3 362 aaPredicted RBP4.87□□□□□ -1.63
CASP4-207ENST00000529565 TSNAXIP1Q2TAA8 658 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 ZCWPW2Q504Y3 356 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 TTC19Q6DKK2 380 aaPredicted RBP4.87□□□□□ -1.63
CASP4-207ENST00000529565 PHLDB3Q6NSJ2 640 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 UNC45BQ8IWX7 931 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 OR6P1Q8NGX9 317 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 LENG9Q96B70 501 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 TSPAN17Q96FV3 270 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 GAD1Q99259 594 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 VPS11Q9H270 941 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 EPC1Q9H2F5 836 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 RNPEPQ9H4A4 650 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 CACYBPQ9HB71 228 aaKnown RBP4.87□□□□□ -1.63
CASP4-207ENST00000529565 Q9Y3F1 56 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 NHSQ6T4R5 1651 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 GLI3P10071 1580 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.87□□□□□ -1.63
CASP4-207ENST00000529565 OPLAHO14841 1288 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 SEPT4O43236 478 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 ERBB2P04626 1255 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 CYP1A2P05177 515 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 POLBP06746 335 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 NFICP08651 508 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 CALRP27797 417 aaKnown RBP4.87□□□□□ -1.63
CASP4-207ENST00000529565 HSPA9P38646 679 aaKnown RBP4.87□□□□□ -1.63
CASP4-207ENST00000529565 SESN2P58004 480 aaPredicted RBP4.87□□□□□ -1.63
CASP4-207ENST00000529565 ZNF177Q13360 481 aaPredicted RBP4.87□□□□□ -1.63
CASP4-207ENST00000529565 E2F5Q15329 346 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 NBPF20Q3BBV1 942 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 ACCSLQ4AC99 568 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 ERMARDQ5T6L9 678 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 IL31Q6EBC2 164 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 PHF13Q86YI8 300 aaPredicted RBP4.87□□□□□ -1.63
CASP4-207ENST00000529565 IRF2BP1Q8IU81 584 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 MCUQ8NE86 351 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 GANCQ8TET4 914 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 BRI3BPQ8WY22 251 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 TTC17Q96AE7 1141 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 PABPC5Q96DU9 382 aaKnown RBP4.87□□□□□ -1.63
CASP4-207ENST00000529565 BTBD6Q96KE9 485 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 CAPNS2Q96L46 248 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 PPP1R12CQ9BZL4 782 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 MUC3BQ9H195 1237 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 DYRK4Q9NR20 520 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 CHORDC1Q9UHD1 332 aaPredicted RBP4.87□□□□□ -1.63
CASP4-207ENST00000529565 CDH9Q9ULB4 789 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 FNDC3AQ9Y2H6 1198 aaKnown RBP4.87□□□□□ -1.63
CASP4-207ENST00000529565 CCDC88AQ3V6T2 1871 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 ZNF536O15090 1300 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 A0A1B0GUA9 196 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 SIGLEC16A6NMB1 481 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 NEMP1O14524 444 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 EIF3HO15372 352 aaKnown RBP eCLIP4.87□□□□□ -1.63
CASP4-207ENST00000529565 ATP9BO43861 1147 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 ARF4P18085 180 aaPredicted RBP4.87□□□□□ -1.63
CASP4-207ENST00000529565 CCR1P32246 355 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 CYP2C18P33260 490 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 KCNJ1P48048 391 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 CARSP49589 748 aaKnown RBP4.87□□□□□ -1.63
CASP4-207ENST00000529565 TPD52P55327 224 aaPredicted RBP4.87□□□□□ -1.63
CASP4-207ENST00000529565 ZNF200P98182 395 aaPredicted RBP4.87□□□□□ -1.63
CASP4-207ENST00000529565 CREMQ03060 361 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 ILF2Q12905 390 aaKnown RBP4.87□□□□□ -1.63
CASP4-207ENST00000529565 GRIK3Q13003 919 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 IFT88Q13099 833 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 MORF4L2Q15014 288 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 SLC35G1Q2M3R5 365 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 MMEL1Q495T6 779 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 EEF1DP3Q658K8 133 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 SLC51AQ86UW1 340 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 NT5DC3Q86UY8 548 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 LZTR1Q8N653 840 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 TOP6BLQ8N6T0 577 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 FAM71DQ8N9W8 422 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 NKX2-3Q8TAU0 364 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 SGSM3Q96HU1 749 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 SERPINB11Q96P15 392 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 VCX3BQ9H321 246 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 SMARCAL1Q9NZC9 954 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 ST3GAL5Q9UNP4 418 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 USP20Q9Y2K6 914 aa4.87□□□□□ -1.63
CASP4-207ENST00000529565 AAR2Q9Y312 384 aaKnown RBP4.87□□□□□ -1.63
CASP4-207ENST00000529565 MYH2Q9UKX2 1941 aa4.86□□□□□ -1.63
CASP4-207ENST00000529565 GMNCA6NCL1 334 aa4.86□□□□□ -1.63
CASP4-207ENST00000529565 ZNF862O60290 1169 aa4.86□□□□□ -1.63
CASP4-207ENST00000529565 SNX2O60749 519 aa4.86□□□□□ -1.63
CASP4-207ENST00000529565 EFCAB14O75071 495 aa4.86□□□□□ -1.63
CASP4-207ENST00000529565 ATP5HO75947 161 aa4.86□□□□□ -1.63
CASP4-207ENST00000529565 PTPN1P18031 435 aaKnown RBP4.86□□□□□ -1.63
CASP4-207ENST00000529565 SPRP35270 261 aaPredicted RBP4.86□□□□□ -1.63
CASP4-207ENST00000529565 NR2C2P49116 596 aa4.86□□□□□ -1.63
CASP4-207ENST00000529565 CDH8P55286 799 aa4.86□□□□□ -1.63
CASP4-207ENST00000529565 OTUD4Q01804 1114 aaKnown RBP4.86□□□□□ -1.63
CASP4-207ENST00000529565 BTG3Q14201 252 aaPredicted RBP4.86□□□□□ -1.63
CASP4-207ENST00000529565 PAN2Q504Q3 1202 aaKnown RBP4.86□□□□□ -1.63
CASP4-207ENST00000529565 GJC2Q5T442 439 aaPredicted RBP4.86□□□□□ -1.63
CASP4-207ENST00000529565 FAM171A1Q5VUB5 890 aa4.86□□□□□ -1.63
CASP4-207ENST00000529565 FRA10AC1Q70Z53 315 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms