RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, human

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUF60-213	ENST00000528999	HIF1A	Q16665	826 aa		11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	GOLGA7B	Q2TAP0	167 aa		11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	KLHL38	Q2WGJ6	581 aa		11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	C9orf57	Q5W0N0	161 aa		11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	OLFML1	Q6UWY5	402 aa		11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	FAM183BP	Q6ZVS7	135 aa		11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	PDIK1L	Q8N165	341 aa		11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	ATP11C	Q8NB49	1132 aa		11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	UHMK1	Q8TAS1	419 aa	Known RBP	11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	NPLOC4	Q8TAT6	608 aa		11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	UBA3	Q8TBC4	463 aa		11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	CENPI	Q92674	756 aa	Predicted RBP	11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	HAUS1	Q96CS2	278 aa		11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	FAF2	Q96CS3	445 aa		11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	TNIP3	Q96KP6	325 aa		11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	RNF157	Q96PX1	679 aa		11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	TMEM121	Q9BTD3	319 aa		11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	TRIM6	Q9C030	488 aa	Predicted RBP	11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	AP5M1	Q9H0R1	490 aa		11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	KLHL11	Q9NVR0	708 aa		11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	SNTG2	Q9NY99	539 aa		11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	PAK5	Q9P286	719 aa		11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	HMGXB4	Q9UGU5	601 aa		11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	GTF2IRD1	Q9UHL9	959 aa		11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	SNX9	Q9Y5X1	595 aa		11.19	□□□□□ -0.62
PUF60-213	ENST00000528999	EXOC1L	A0A1B0GW35	172 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	TMEM120B	A0PK00	339 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	BCLAF3	A2AJT9	711 aa	Known RBP	11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	MANSC4	A6NHS7	340 aa	Predicted RBP	11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	CCT8L1P	A6NM43	557 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999		E5RJQ4	531 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	CHAD	O15335	359 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	GSTA1	P08263	222 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	ZSCAN5DP	P0CG00	497 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	RBP3	P10745	1247 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	PAX3	P23760	479 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	HOXC8	P31273	242 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	GNL1	P36915	607 aa	Predicted RBP	11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	CTCF	P49711	727 aa	Predicted RBP	11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	PSEN2	P49810	448 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	BCAT1	P54687	386 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	CDH6	P55285	790 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	GEMIN4	P57678	1058 aa	Known RBP	11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	INHBE	P58166	350 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	IL9R	Q01113	521 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	ROR1	Q01973	937 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	ACTN3	Q08043	901 aa	Predicted RBP	11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	BST2	Q10589	180 aa	Known RBP	11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	KIZ	Q2M2Z5	673 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	SV2C	Q496J9	727 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	CCDC14	Q49A88	953 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	EFHC2	Q5JST6	749 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	EFHC1	Q5JVL4	640 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	FBXO47	Q5MNV8	452 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	TAF2	Q6P1X5	1199 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	VSTM1	Q6UX27	236 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	RGS9BP	Q6ZS82	235 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	BZW1	Q7L1Q6	419 aa	Known RBP	11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	SLC26A9	Q7LBE3	791 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	CCDC13	Q8IYE1	715 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	TOP6BL	Q8N6T0	577 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	EMC1	Q8N766	993 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	GBP7	Q8N8V2	638 aa	Predicted RBP	11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	PYROXD1	Q8WU10	500 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	DYDC1	Q8WWB3	177 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	CPT1B	Q92523	772 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	KAT2B	Q92831	832 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	APBB2	Q92870	758 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	ALKBH8	Q96BT7	664 aa	Known RBP	11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	C9orf72	Q96LT7	481 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	MAGEB18	Q96M61	343 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	PRMT1	Q99873	361 aa	Known RBP	11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	PTPN18	Q99952	460 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	MRPL45	Q9BRJ2	306 aa	Known RBP	11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	ZNF670	Q9BS34	389 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	RABEP2	Q9H5N1	569 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	RCOR3	Q9P2K3	495 aa	Predicted RBP	11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	PCSK1N	Q9UHG2	260 aa		11.18	□□□□□ -0.62
PUF60-213	ENST00000528999	SMIM28	A0A1B0GU29	152 aa		11.17	□□□□□ -0.62
PUF60-213	ENST00000528999	DCAF8L1	A6NGE4	600 aa		11.17	□□□□□ -0.62
PUF60-213	ENST00000528999	FAM47DP	A6NHR8	397 aa		11.17	□□□□□ -0.62
PUF60-213	ENST00000528999	KPNA7	A9QM74	516 aa		11.17	□□□□□ -0.62
PUF60-213	ENST00000528999	TRIM66	O15016	1216 aa		11.17	□□□□□ -0.62
PUF60-213	ENST00000528999	FAM155B	O75949	473 aa		11.17	□□□□□ -0.62
PUF60-213	ENST00000528999	IFNB1	P01574	187 aa		11.17	□□□□□ -0.62
PUF60-213	ENST00000528999	IGHA2	P01877	340 aa		11.17	□□□□□ -0.62
PUF60-213	ENST00000528999	VIM	P08670	466 aa	Known RBP	11.17	□□□□□ -0.62
PUF60-213	ENST00000528999	WARS	P23381	471 aa	Known RBP	11.17	□□□□□ -0.62
PUF60-213	ENST00000528999	LRPAP1	P30533	357 aa		11.17	□□□□□ -0.62
PUF60-213	ENST00000528999	SLC8A3	P57103	927 aa		11.17	□□□□□ -0.62
PUF60-213	ENST00000528999	IRX5	P78411	483 aa	Predicted RBP	11.17	□□□□□ -0.62
PUF60-213	ENST00000528999	PDIA2	Q13087	525 aa	Known RBP	11.17	□□□□□ -0.62
PUF60-213	ENST00000528999	KRT81	Q14533	505 aa		11.17	□□□□□ -0.62
PUF60-213	ENST00000528999	SNX17	Q15036	470 aa		11.17	□□□□□ -0.62
PUF60-213	ENST00000528999	QPCT	Q16769	361 aa		11.17	□□□□□ -0.62
PUF60-213	ENST00000528999	SOWAHA	Q2M3V2	549 aa		11.17	□□□□□ -0.62
PUF60-213	ENST00000528999	KCNT1	Q5JUK3	1230 aa		11.17	□□□□□ -0.62
PUF60-213	ENST00000528999	RNF187	Q5TA31	235 aa	Predicted RBP	11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms