RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 CAP2P40123 477 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 RAP1GAPP47736 663 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 ACTR2P61160 394 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 CYLC2Q14093 348 aaPredicted RBP18.63■□□□□ 0.57
LTBP3-210ENST00000528516 SEPT6Q14141 434 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 TCP10LQ8TDR4 215 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 IFT43Q96FT9 208 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 SIK2Q9H0K1 926 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 TMEM8AQ9HCN3 771 aa18.63■□□□□ 0.57
LTBP3-210ENST00000528516 ARL4AP40617 200 aa18.62■□□□□ 0.57
LTBP3-210ENST00000528516 GABPAQ06546 454 aa18.62■□□□□ 0.57
LTBP3-210ENST00000528516 CDC16Q13042 620 aa18.62■□□□□ 0.57
LTBP3-210ENST00000528516 TAF12Q16514 161 aa18.62■□□□□ 0.57
LTBP3-210ENST00000528516 RABGAP1LQ5R372 815 aa18.62■□□□□ 0.57
LTBP3-210ENST00000528516 TRAPPC12Q8WVT3 735 aa18.62■□□□□ 0.57
LTBP3-210ENST00000528516 RIT2Q99578 217 aa18.62■□□□□ 0.57
LTBP3-210ENST00000528516 SNX25Q9H3E2 840 aa18.62■□□□□ 0.57
LTBP3-210ENST00000528516 PSMC3IPQ9P2W1 217 aaPredicted RBP18.62■□□□□ 0.57
LTBP3-210ENST00000528516 BLOC1S6Q9UL45 172 aa18.62■□□□□ 0.57
LTBP3-210ENST00000528516 ZNRF3Q9ULT6 936 aa18.62■□□□□ 0.57
LTBP3-210ENST00000528516 MTO1Q9Y2Z2 717 aaKnown RBP18.62■□□□□ 0.57
LTBP3-210ENST00000528516 COQ9O75208 318 aa18.62■□□□□ 0.57
LTBP3-210ENST00000528516 LSAMPQ13449 338 aa18.62■□□□□ 0.57
LTBP3-210ENST00000528516 RWDD4Q6NW29 188 aaKnown RBP18.62■□□□□ 0.57
LTBP3-210ENST00000528516 SPATA18Q8TC71 538 aa18.62■□□□□ 0.57
LTBP3-210ENST00000528516 UVRAGQ9P2Y5 699 aa18.62■□□□□ 0.57
LTBP3-210ENST00000528516 IP6K2Q9UHH9 426 aa18.62■□□□□ 0.57
LTBP3-210ENST00000528516 TIAM2Q8IVF5 1701 aa18.62■□□□□ 0.57
LTBP3-210ENST00000528516 A8MXQ7 604 aa18.62■□□□□ 0.57
LTBP3-210ENST00000528516 RNASEH1O60930 286 aaKnown RBP18.62■□□□□ 0.57
LTBP3-210ENST00000528516 DNAJC6O75061 913 aa18.62■□□□□ 0.57
LTBP3-210ENST00000528516 ETS1P14921 441 aa18.62■□□□□ 0.57
LTBP3-210ENST00000528516 CDH8P55286 799 aa18.62■□□□□ 0.57
LTBP3-210ENST00000528516 SLC44A4Q53GD3 710 aa18.62■□□□□ 0.57
LTBP3-210ENST00000528516 FAM81BQ96LP2 452 aa18.62■□□□□ 0.57
LTBP3-210ENST00000528516 GTF3C4Q9UKN8 822 aa18.62■□□□□ 0.57
LTBP3-210ENST00000528516 GRID1Q9ULK0 1009 aa18.62■□□□□ 0.57
LTBP3-210ENST00000528516 R3HDM2Q9Y2K5 976 aaKnown RBP18.62■□□□□ 0.57
LTBP3-210ENST00000528516 TGFB1I1O43294 461 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 ATP9BO43861 1147 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 PRKCBP05771 671 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 CLCN3P51790 818 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 SLC12A1Q13621 1099 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 PTK6Q13882 451 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 SUPT20HL1Q3ZLR7 823 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 HSP90AA5PQ58FG0 334 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 MORC4Q8TE76 937 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 CATSPER2Q96P56 530 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 EIF3DO15371 548 aaKnown RBP eCLIP18.61■□□□□ 0.57
LTBP3-210ENST00000528516 LDHAP00338 332 aaKnown RBP18.61■□□□□ 0.57
LTBP3-210ENST00000528516 MAGEA10P43363 369 aaPredicted RBP18.61■□□□□ 0.57
LTBP3-210ENST00000528516 RNF135Q8IUD6 432 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 GSDMBQ8TAX9 411 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 SIKE1Q9BRV8 207 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 TEX13BQ9BXU2 312 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 RMI1Q9H9A7 625 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 GTPBP10A4D1E9 387 aaKnown RBP18.61■□□□□ 0.57
LTBP3-210ENST00000528516 SIGLEC16A6NMB1 481 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 CACNB2Q08289 660 aaPredicted RBP18.61■□□□□ 0.57
LTBP3-210ENST00000528516 FASTKD3Q14CZ7 662 aaKnown RBP18.61■□□□□ 0.57
LTBP3-210ENST00000528516 PLEKHG4Q58EX7 1191 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 XKR3Q5GH77 459 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 LPCAT4Q643R3 524 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 KLC3Q6P597 504 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 RBM44Q6ZP01 1051 aaKnown RBP18.61■□□□□ 0.57
LTBP3-210ENST00000528516 SYDE1Q6ZW31 735 aaPredicted RBP18.61■□□□□ 0.57
LTBP3-210ENST00000528516 OR6Y1Q8NGX8 325 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 SYTL5Q8TDW5 730 aaPredicted RBP18.61■□□□□ 0.57
LTBP3-210ENST00000528516 CDKL2Q92772 493 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 DCLK3Q9C098 648 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 ELP3Q9H9T3 547 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 HOXC10Q9NYD6 342 aa18.61■□□□□ 0.57
LTBP3-210ENST00000528516 MEI4A8MW99 385 aa18.6■□□□□ 0.57
LTBP3-210ENST00000528516 TRAFD1O14545 582 aaPredicted RBP18.6■□□□□ 0.57
LTBP3-210ENST00000528516 SDC4P31431 198 aa18.6■□□□□ 0.57
LTBP3-210ENST00000528516 CDK16Q00536 496 aa18.6■□□□□ 0.57
LTBP3-210ENST00000528516 SFSWAPQ12872 951 aaKnown RBP18.6■□□□□ 0.57
LTBP3-210ENST00000528516 ACAD10Q6JQN1 1059 aa18.6■□□□□ 0.57
LTBP3-210ENST00000528516 ALYREFQ86V81 257 aaKnown RBP18.6■□□□□ 0.57
LTBP3-210ENST00000528516 FAM111AQ96PZ2 611 aa18.6■□□□□ 0.57
LTBP3-210ENST00000528516 PHF12Q96QT6 1004 aa18.6■□□□□ 0.57
LTBP3-210ENST00000528516 TSR3Q9UJK0 312 aaKnown RBP18.6■□□□□ 0.57
LTBP3-210ENST00000528516 MED7O43513 233 aa18.6■□□□□ 0.57
LTBP3-210ENST00000528516 BGNP21810 368 aa18.6■□□□□ 0.57
LTBP3-210ENST00000528516 INHBCP55103 352 aa18.6■□□□□ 0.57
LTBP3-210ENST00000528516 MROH9Q5TGP6 573 aa18.6■□□□□ 0.57
LTBP3-210ENST00000528516 PRPF39Q86UA1 669 aaKnown RBP18.6■□□□□ 0.57
LTBP3-210ENST00000528516 LRRC43Q8N309 656 aa18.6■□□□□ 0.57
LTBP3-210ENST00000528516 KIF12Q96FN5 646 aa18.6■□□□□ 0.57
LTBP3-210ENST00000528516 SENP7Q9BQF6 1050 aa18.6■□□□□ 0.57
LTBP3-210ENST00000528516 CEP41Q9BYV8 373 aa18.6■□□□□ 0.57
LTBP3-210ENST00000528516 SPDYE2BA6NHP3 402 aa18.6■□□□□ 0.57
LTBP3-210ENST00000528516 KRT37O76014 449 aa18.6■□□□□ 0.57
LTBP3-210ENST00000528516 ASLP04424 464 aa18.6■□□□□ 0.57
LTBP3-210ENST00000528516 SPDYE6P0CI01 402 aa18.6■□□□□ 0.57
LTBP3-210ENST00000528516 TXNP10599 105 aaKnown RBP18.6■□□□□ 0.57
LTBP3-210ENST00000528516 ITGB5P18084 799 aa18.6■□□□□ 0.57
LTBP3-210ENST00000528516 OXNAD1Q96HP4 312 aaPredicted RBP18.6■□□□□ 0.57
LTBP3-210ENST00000528516 MRPL4Q9BYD3 311 aaKnown RBP18.6■□□□□ 0.57
LTBP3-210ENST00000528516 NMUR2Q9GZQ4 415 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms