RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 RAB20Q9NX57 234 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 SMPD4Q9NXE4 827 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 ARMCX3Q9UH62 379 aaPredicted RBP16.48■□□□□ 0.23
CAPN1-213ENST00000527897 CTNND2Q9UQB3 1225 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 HELZP42694 1942 aaKnown RBP16.48■□□□□ 0.23
CAPN1-213ENST00000527897 ZFHX2Q9C0A1 2572 aaPredicted RBP16.48■□□□□ 0.23
CAPN1-213ENST00000527897 ZNF840PA6NDX5 716 aa16.47■□□□□ 0.23
CAPN1-213ENST00000527897 RTN3O95197 1032 aaPredicted RBP16.47■□□□□ 0.23
CAPN1-213ENST00000527897 FAM200BP0CF97 657 aa16.47■□□□□ 0.23
CAPN1-213ENST00000527897 RPS9P46781 194 aaKnown RBP16.47■□□□□ 0.23
CAPN1-213ENST00000527897 PDE6CP51160 858 aa16.47■□□□□ 0.23
CAPN1-213ENST00000527897 SLC5A3P53794 718 aa16.47■□□□□ 0.23
CAPN1-213ENST00000527897 MTAPQ13126 283 aa16.47■□□□□ 0.23
CAPN1-213ENST00000527897 FZD5Q13467 585 aa16.47■□□□□ 0.23
CAPN1-213ENST00000527897 ZNF268Q14587 947 aaPredicted RBP16.47■□□□□ 0.23
CAPN1-213ENST00000527897 ZNF77Q15935 545 aa16.47■□□□□ 0.23
CAPN1-213ENST00000527897 CAMK4Q16566 473 aa16.47■□□□□ 0.23
CAPN1-213ENST00000527897 CBWD6Q4V339 395 aa16.47■□□□□ 0.23
CAPN1-213ENST00000527897 CBWD3Q5JTY5 395 aa16.47■□□□□ 0.23
CAPN1-213ENST00000527897 CBWD5Q5RIA9 395 aa16.47■□□□□ 0.23
CAPN1-213ENST00000527897 TSSK4Q6SA08 328 aa16.47■□□□□ 0.23
CAPN1-213ENST00000527897 ELOA2Q8IYF1 753 aaPredicted RBP16.47■□□□□ 0.23
CAPN1-213ENST00000527897 CRYBG2Q8N1P7 616 aa16.47■□□□□ 0.23
CAPN1-213ENST00000527897 NELFBQ8WX92 580 aa16.47■□□□□ 0.23
CAPN1-213ENST00000527897 NKD2Q969F2 451 aaPredicted RBP16.47■□□□□ 0.23
CAPN1-213ENST00000527897 DHTKD1Q96HY7 919 aaPredicted RBP16.47■□□□□ 0.23
CAPN1-213ENST00000527897 FAM83CQ9BQN1 747 aa16.47■□□□□ 0.23
CAPN1-213ENST00000527897 DNAI2Q9GZS0 605 aa16.47■□□□□ 0.23
CAPN1-213ENST00000527897 HPS4Q9NQG7 708 aa16.47■□□□□ 0.23
CAPN1-213ENST00000527897 DUS2Q9NX74 493 aaKnown RBP16.47■□□□□ 0.23
CAPN1-213ENST00000527897 GCNT4Q9P109 453 aa16.47■□□□□ 0.23
CAPN1-213ENST00000527897 CHORDC1Q9UHD1 332 aaPredicted RBP16.47■□□□□ 0.23
CAPN1-213ENST00000527897 WNT6Q9Y6F9 365 aa16.47■□□□□ 0.23
CAPN1-213ENST00000527897 DMDP11532 3685 aa16.47■□□□□ 0.23
CAPN1-213ENST00000527897 BEST1O76090 585 aa16.46■□□□□ 0.23
CAPN1-213ENST00000527897 BMP6P22004 513 aa16.46■□□□□ 0.23
CAPN1-213ENST00000527897 PPP1R2P41236 205 aa16.46■□□□□ 0.23
CAPN1-213ENST00000527897 PPP3CCP48454 512 aa16.46■□□□□ 0.23
CAPN1-213ENST00000527897 MLLT6P55198 1093 aaPredicted RBP16.46■□□□□ 0.23
CAPN1-213ENST00000527897 STX17P56962 302 aa16.46■□□□□ 0.23
CAPN1-213ENST00000527897 UBE2HP62256 183 aa16.46■□□□□ 0.23
CAPN1-213ENST00000527897 INCA1Q0VD86 236 aa16.46■□□□□ 0.23
CAPN1-213ENST00000527897 USP4Q13107 963 aa16.46■□□□□ 0.23
CAPN1-213ENST00000527897 LRRC32Q14392 662 aa16.46■□□□□ 0.23
CAPN1-213ENST00000527897 C1orf228Q6PIY5 440 aa16.46■□□□□ 0.23
CAPN1-213ENST00000527897 ASCL5Q7RTU5 278 aa16.46■□□□□ 0.23
CAPN1-213ENST00000527897 ZC3H3Q8IXZ2 948 aaKnown RBP16.46■□□□□ 0.23
CAPN1-213ENST00000527897 MAML2Q8IZL2 1156 aaPredicted RBP16.46■□□□□ 0.23
CAPN1-213ENST00000527897 TATDN2Q93075 761 aa16.46■□□□□ 0.23
CAPN1-213ENST00000527897 CYFIP2Q96F07 1278 aa16.46■□□□□ 0.23
CAPN1-213ENST00000527897 SMOQ99835 787 aa16.46■□□□□ 0.23
CAPN1-213ENST00000527897 ARID3AQ99856 593 aa16.46■□□□□ 0.23
CAPN1-213ENST00000527897 CPQQ9Y646 472 aa16.46■□□□□ 0.23
CAPN1-213ENST00000527897 MYO16Q9Y6X6 1858 aa16.46■□□□□ 0.22
CAPN1-213ENST00000527897 OTOL1A6NHN0 477 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-213ENST00000527897 SCAMP3O14828 347 aaKnown RBP16.45■□□□□ 0.22
CAPN1-213ENST00000527897 CILPO75339 1184 aa16.45■□□□□ 0.22
CAPN1-213ENST00000527897 MBL2P11226 248 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-213ENST00000527897 CHRNB1P11230 501 aa16.45■□□□□ 0.22
CAPN1-213ENST00000527897 LRMPQ12912 555 aa16.45■□□□□ 0.22
CAPN1-213ENST00000527897 MORC3Q14149 939 aa16.45■□□□□ 0.22
CAPN1-213ENST00000527897 PDGFRLQ15198 375 aa16.45■□□□□ 0.22
CAPN1-213ENST00000527897 ZC3H14Q6PJT7 736 aaKnown RBP16.45■□□□□ 0.22
CAPN1-213ENST00000527897 ZNF687Q8N1G0 1237 aa16.45■□□□□ 0.22
CAPN1-213ENST00000527897 CPA6Q8N4T0 437 aa16.45■□□□□ 0.22
CAPN1-213ENST00000527897 PDZD8Q8NEN9 1154 aa16.45■□□□□ 0.22
CAPN1-213ENST00000527897 ZMIZ2Q8NF64 920 aa16.45■□□□□ 0.22
CAPN1-213ENST00000527897 OSCP1Q8WVF1 389 aa16.45■□□□□ 0.22
CAPN1-213ENST00000527897 HEXIM2Q96MH2 286 aaKnown RBP16.45■□□□□ 0.22
CAPN1-213ENST00000527897 RNF38Q9H0F5 515 aa16.45■□□□□ 0.22
CAPN1-213ENST00000527897 CHRDQ9H2X0 955 aa16.45■□□□□ 0.22
CAPN1-213ENST00000527897 CISHQ9NSE2 258 aa16.45■□□□□ 0.22
CAPN1-213ENST00000527897 GMIPQ9P107 970 aa16.45■□□□□ 0.22
CAPN1-213ENST00000527897 ARHGAP26Q9UNA1 814 aa16.45■□□□□ 0.22
CAPN1-213ENST00000527897 BICDL2A1A5D9 508 aa16.44■□□□□ 0.22
CAPN1-213ENST00000527897 PRR23AA6NEV1 266 aa16.44■□□□□ 0.22
CAPN1-213ENST00000527897 PPP1R3GB7ZBB8 358 aa16.44■□□□□ 0.22
CAPN1-213ENST00000527897 PROB1E7EW31 1015 aa16.44■□□□□ 0.22
CAPN1-213ENST00000527897 LEFTY2O00292 366 aa16.44■□□□□ 0.22
CAPN1-213ENST00000527897 TNFRSF10BO14763 440 aa16.44■□□□□ 0.22
CAPN1-213ENST00000527897 Q6ZS52 159 aa16.44■□□□□ 0.22
CAPN1-213ENST00000527897 WHAMMQ8TF30 809 aa16.44■□□□□ 0.22
CAPN1-213ENST00000527897 ATP2A3Q93084 1043 aa16.44■□□□□ 0.22
CAPN1-213ENST00000527897 CEP63Q96MT8 703 aa16.44■□□□□ 0.22
CAPN1-213ENST00000527897 HNRNPABQ99729 332 aaKnown RBP16.44■□□□□ 0.22
CAPN1-213ENST00000527897 DUSP9Q99956 384 aaKnown RBP16.44■□□□□ 0.22
CAPN1-213ENST00000527897 NACA2Q9H009 215 aa16.44■□□□□ 0.22
CAPN1-213ENST00000527897 LINC00597Q9H2U6 94 aa16.44■□□□□ 0.22
CAPN1-213ENST00000527897 METTL14Q9HCE5 456 aaKnown RBP16.44■□□□□ 0.22
CAPN1-213ENST00000527897 FBXO4Q9UKT5 387 aa16.44■□□□□ 0.22
CAPN1-213ENST00000527897 WDR87Q6ZQQ6 2873 aa16.44■□□□□ 0.22
CAPN1-213ENST00000527897 ATG2BQ96BY7 2078 aa16.44■□□□□ 0.22
CAPN1-213ENST00000527897 OAS1P00973 400 aaKnown RBP16.43■□□□□ 0.22
CAPN1-213ENST00000527897 PFKLP17858 780 aa16.43■□□□□ 0.22
CAPN1-213ENST00000527897 ZXDBP98169 803 aa16.43■□□□□ 0.22
CAPN1-213ENST00000527897 PAK1Q13153 545 aa16.43■□□□□ 0.22
CAPN1-213ENST00000527897 HECTD3Q5T447 861 aa16.43■□□□□ 0.22
CAPN1-213ENST00000527897 PPP1R26Q5T8A7 1209 aaPredicted RBP16.43■□□□□ 0.22
CAPN1-213ENST00000527897 TTI2Q6NXR4 508 aa16.43■□□□□ 0.22
CAPN1-213ENST00000527897 CLEC20AQ6ZU45 233 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms