RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 CENPIQ92674 756 aaPredicted RBP7.49□□□□□ -1.21
CTNND1-216ENST00000527467 GAL3ST3Q96A11 431 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 CITED4Q96RK1 184 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 THUMPD3Q9BV44 507 aaKnown RBP7.49□□□□□ -1.21
CTNND1-216ENST00000527467 ADI1Q9BV57 179 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 OSBPL11Q9BXB4 747 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 IRF2BPLQ9H1B7 796 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 DNAJC11Q9NVH1 559 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 CRNNQ9UBG3 495 aaPredicted RBP7.49□□□□□ -1.21
CTNND1-216ENST00000527467 PLCL2Q9UPR0 1127 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 CAMTA1Q9Y6Y1 1673 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 FAM92AA1XBS5 289 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 TRPC5OSA6NMA1 111 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 INO80B-WBP1J3KQ70 363 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 KLHL41O60662 606 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 SRGAP2O75044 1071 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 DGKIO75912 1065 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 TNFAIP8O95379 198 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 IFNA14P01570 189 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 NQO1P15559 274 aaKnown RBP7.49□□□□□ -1.21
CTNND1-216ENST00000527467 MSH3P20585 1137 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 TARSP26639 723 aaKnown RBP7.49□□□□□ -1.21
CTNND1-216ENST00000527467 PPP3CCP48454 512 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 IL5RAQ01344 420 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 HSF2Q03933 536 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 RBBP4Q09028 425 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 ME3Q16798 604 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 DCAF4L1Q3SXM0 396 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 IZUMO2Q6UXV1 221 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 KCTD17Q8N5Z5 321 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 ZNF713Q8N859 430 aaPredicted RBP7.49□□□□□ -1.21
CTNND1-216ENST00000527467 GIMAP8Q8ND71 665 aaPredicted RBP7.49□□□□□ -1.21
CTNND1-216ENST00000527467 ZNF671Q8TAW3 534 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 EEF1AKMT1Q8WVE0 214 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 SKA1Q96BD8 255 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 EDC3Q96F86 508 aaKnown RBP7.49□□□□□ -1.21
CTNND1-216ENST00000527467 DSCC1Q9BVC3 393 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 INO80BQ9C086 356 aaPredicted RBP7.49□□□□□ -1.21
CTNND1-216ENST00000527467 DDX47Q9H0S4 455 aaKnown RBP7.49□□□□□ -1.21
CTNND1-216ENST00000527467 TMEM165Q9HC07 324 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 DDX56Q9NY93 547 aaKnown RBP7.49□□□□□ -1.21
CTNND1-216ENST00000527467 CEP72Q9P209 647 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 TSR3Q9UJK0 312 aaKnown RBP7.49□□□□□ -1.21
CTNND1-216ENST00000527467 RCOR1Q9UKL0 485 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 TPRKBQ9Y3C4 175 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 ARPC4-TTLL3A0A0A6YYG9 625 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 K7ERI5 159 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 PDE8BO95263 885 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 GJB1P08034 283 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 PAX7P23759 505 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 LSP1P33241 339 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 GYG1P46976 350 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 FNTAP49354 379 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 NUDT2P50583 147 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 BCAR1P56945 870 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 SSTP61278 116 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 CCDC137Q6PK04 289 aaKnown RBP7.49□□□□□ -1.21
CTNND1-216ENST00000527467 PADI6Q6TGC4 694 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 TMEM179Q6ZVK1 233 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 SYDE1Q6ZW31 735 aaPredicted RBP7.49□□□□□ -1.21
CTNND1-216ENST00000527467 MIGA2Q7L4E1 593 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 GAS2L3Q86XJ1 694 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 KBTBD3Q8NAB2 608 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 BEST2Q8NFU1 509 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 PI4K2BQ8TCG2 481 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 SIPA1Q96FS4 1042 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 ZNF285Q96NJ3 590 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 TMEM79Q9BSE2 394 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 MCOLN1Q9GZU1 580 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 ELOVL6Q9H5J4 265 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 GREM2Q9H772 168 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 PSMC3IPQ9P2W1 217 aaPredicted RBP7.49□□□□□ -1.21
CTNND1-216ENST00000527467 MINPP1Q9UNW1 487 aa7.49□□□□□ -1.21
CTNND1-216ENST00000527467 GPC6Q9Y625 555 aaPredicted RBP7.49□□□□□ -1.21
CTNND1-216ENST00000527467 E7EWF7 191 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 WWP2O00308 870 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 TRIM3O75382 744 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-216ENST00000527467 PGK2P07205 417 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 DARSP14868 501 aaKnown RBP7.48□□□□□ -1.21
CTNND1-216ENST00000527467 ACLYP53396 1101 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 ARPP19P56211 112 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 SLC39A14Q15043 492 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 C11orf57Q6ZUT1 292 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-216ENST00000527467 ADCK2Q7Z695 626 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 IQCF2Q8IXL9 164 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 CENPLQ8N0S6 344 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-216ENST00000527467 MINDY2Q8NBR6 621 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 ASAP3Q8TDY4 903 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 FNIP1Q8TF40 1166 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 S100ZQ8WXG8 99 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 S100A13Q99584 98 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 GSDMCQ9BYG8 508 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 PHACTR1Q9C0D0 580 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 ENOPH1Q9UHY7 261 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 USP17L12C9JPN9 530 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 USP17L21D6R901 530 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 PTGER2P43116 358 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 POU5F1Q01860 360 aaKnown RBP7.48□□□□□ -1.21
CTNND1-216ENST00000527467 TRAF2Q12933 501 aa7.48□□□□□ -1.21
CTNND1-216ENST00000527467 ALCAMQ13740 583 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms