RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 PGM1P36871 562 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 EIF4A3P38919 411 aaKnown RBP6.06□□□□□ -1.44
CD44-225ENST00000527326 PPP1R2P41236 205 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 GPD2P43304 727 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 SLC18A1P54219 525 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 P2RX3P56373 397 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 KCNQ4P56696 695 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 MAP3K7CLP57077 242 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 ACTR3P61158 418 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 ADAM17P78536 824 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 PPP2R2BQ00005 443 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 LRRC14Q15048 493 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 SF3B4Q15427 424 aaKnown RBP eCLIP6.06□□□□□ -1.44
CD44-225ENST00000527326 STILQ15468 1287 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 MOGQ16653 247 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 TRIM16LQ309B1 348 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 MCMDC2Q4G0Z9 681 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 PPP6R3Q5H9R7 873 aaPredicted RBP6.06□□□□□ -1.44
CD44-225ENST00000527326 HP1BP3Q5SSJ5 553 aaPredicted RBP6.06□□□□□ -1.44
CD44-225ENST00000527326 C10orf76Q5T2E6 689 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 AGAP7PQ5VUJ5 663 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 KRT40Q6A162 431 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 ZNF746Q6NUN9 644 aaPredicted RBP6.06□□□□□ -1.44
CD44-225ENST00000527326 FAM117BQ6P1L5 589 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 KYAT3Q6YP21 454 aaKnown RBP6.06□□□□□ -1.44
CD44-225ENST00000527326 PRR23CQ6ZRP0 262 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 C8orf86Q6ZUL3 223 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 USP43Q70EL4 1123 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 LPCAT2Q7L5N7 544 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 G2E3Q7L622 706 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 BTLAQ7Z6A9 289 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 CLNKQ7Z7G1 428 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 GALNT7Q86SF2 657 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 ADAMTSL2Q86TH1 951 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 ZNF589Q86UQ0 364 aaPredicted RBP6.06□□□□□ -1.44
CD44-225ENST00000527326 AACSQ86V21 672 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 SCYL3Q8IZE3 742 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 SLC38A6Q8IZM9 456 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 NATD1Q8N6N6 113 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 VGLL2Q8N8G2 317 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 ANKRD53Q8N9V6 530 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 MGARPQ8TDB4 240 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 ADAMTS16Q8TE57 1224 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 U2AF1L4Q8WU68 220 aaKnown RBP6.06□□□□□ -1.44
CD44-225ENST00000527326 TRUB1Q8WWH5 349 aaKnown RBP6.06□□□□□ -1.44
CD44-225ENST00000527326 SGCDQ92629 289 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 MTMR8Q96EF0 704 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 COQ7Q99807 217 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 MRPL9Q9BYD2 267 aaKnown RBP6.06□□□□□ -1.44
CD44-225ENST00000527326 PAIP1Q9H074 479 aaKnown RBP6.06□□□□□ -1.44
CD44-225ENST00000527326 SEMA6BQ9H3T3 888 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 CCSER2Q9H7U1 834 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 CNNM2Q9H8M5 875 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 FANCEQ9HB96 536 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 KCNK9Q9NPC2 374 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 C8orf4Q9NR00 106 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 ZDHHC18Q9NUE0 388 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 AGPAT5Q9NUQ2 364 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 STMN3Q9NZ72 180 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 ANKMY1Q9P2S6 941 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 PCDHA12Q9UN75 941 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 DNM3Q9UQ16 869 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 ATP11BQ9Y2G3 1177 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 SPEF1Q9Y4P9 236 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 DISP2A7MBM2 1401 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 CRB1P82279 1406 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 ADGRF5Q8IZF2 1346 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 STK36Q9NRP7 1315 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 MRC1P22897 1456 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 TEX51A0A1B0GUA7 166 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 ILVBLA1L0T0 632 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 GOLGA8IPA6NC78 632 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 ZSCAN5BA6NJL1 495 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 FAM229AH3BQW9 127 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 TXNDC9O14530 226 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 ENPP3O14638 875 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 KCNK3O14649 394 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 CLOCKO15516 846 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 RIPK2O43353 540 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 BUB1O43683 1085 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 SCO2O43819 266 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 EDF1O60869 148 aaKnown RBP6.05□□□□□ -1.44
CD44-225ENST00000527326 JRKO75564 520 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 BAG2O95816 211 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 HMOX1P09601 288 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 FAM58BPP0C7Q3 252 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 FAM228BP0C875 321 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 EEF2P13639 858 aaKnown RBP6.05□□□□□ -1.44
CD44-225ENST00000527326 KRT5P13647 590 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 BRAFP15056 766 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 GLULP15104 373 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 PRKACAP17612 351 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 TBXAS1P24557 533 aaPredicted RBP6.05□□□□□ -1.44
CD44-225ENST00000527326 PRDX6P30041 224 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 RCVRNP35243 200 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 FDFT1P37268 417 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 ECE1P42892 770 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 CBX5P45973 191 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 ALDH3B2P48448 385 aa6.05□□□□□ -1.44
CD44-225ENST00000527326 CLK3P49761 638 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms