RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 RNF38Q9H0F5 515 aa17.42■□□□□ 0.38
CHMP4A-203ENST00000527154 CALCOCO1Q9P1Z2 691 aa17.42■□□□□ 0.38
CHMP4A-203ENST00000527154 BCCIPQ9P287 314 aaKnown RBP eCLIP17.42■□□□□ 0.38
CHMP4A-203ENST00000527154 GTF3C4Q9UKN8 822 aa17.42■□□□□ 0.38
CHMP4A-203ENST00000527154 APOBEC2Q9Y235 224 aaKnown RBP17.42■□□□□ 0.38
CHMP4A-203ENST00000527154 NFE2L3Q9Y4A8 694 aa17.42■□□□□ 0.38
CHMP4A-203ENST00000527154 PCDHB6Q9Y5E3 794 aa17.42■□□□□ 0.38
CHMP4A-203ENST00000527154 CEP192Q8TEP8 1941 aa17.42■□□□□ 0.38
CHMP4A-203ENST00000527154 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.41■□□□□ 0.38
CHMP4A-203ENST00000527154 SLC9A3R1O14745 358 aaPredicted RBP17.41■□□□□ 0.38
CHMP4A-203ENST00000527154 OAS1P00973 400 aaKnown RBP17.41■□□□□ 0.38
CHMP4A-203ENST00000527154 ACOT2P49753 483 aa17.41■□□□□ 0.38
CHMP4A-203ENST00000527154 GTF2BQ00403 316 aa17.41■□□□□ 0.38
CHMP4A-203ENST00000527154 TMEM119Q4V9L6 283 aa17.41■□□□□ 0.38
CHMP4A-203ENST00000527154 OSTM1Q86WC4 334 aa17.41■□□□□ 0.38
CHMP4A-203ENST00000527154 C8orf76Q96K31 380 aa17.41■□□□□ 0.38
CHMP4A-203ENST00000527154 ZNF560Q96MR9 790 aa17.41■□□□□ 0.38
CHMP4A-203ENST00000527154 ZDHHC5Q9C0B5 715 aa17.41■□□□□ 0.38
CHMP4A-203ENST00000527154 FAM124BQ9H5Z6 455 aaPredicted RBP17.41■□□□□ 0.38
CHMP4A-203ENST00000527154 ARHGEF4Q9NR80 690 aa17.41■□□□□ 0.38
CHMP4A-203ENST00000527154 GDAP2Q9NXN4 497 aa17.41■□□□□ 0.38
CHMP4A-203ENST00000527154 DDX43Q9NXZ2 648 aaKnown RBP17.41■□□□□ 0.38
CHMP4A-203ENST00000527154 STARD13Q9Y3M8 1113 aa17.41■□□□□ 0.38
CHMP4A-203ENST00000527154 TCHHQ07283 1943 aa17.41■□□□□ 0.38
CHMP4A-203ENST00000527154 NPHP3-ACAD11A0A0J9YXS1 232 aa17.4■□□□□ 0.38
CHMP4A-203ENST00000527154 ZNF840PA6NDX5 716 aa17.4■□□□□ 0.38
CHMP4A-203ENST00000527154 PLA2G4BP0C869 781 aa17.4■□□□□ 0.38
CHMP4A-203ENST00000527154 ZNF883P0CG24 379 aa17.4■□□□□ 0.38
CHMP4A-203ENST00000527154 ATP2C1P98194 919 aaPredicted RBP17.4■□□□□ 0.38
CHMP4A-203ENST00000527154 RESTQ13127 1097 aa17.4■□□□□ 0.38
CHMP4A-203ENST00000527154 VSTM1Q6UX27 236 aa17.4■□□□□ 0.38
CHMP4A-203ENST00000527154 TRMT11Q7Z4G4 463 aaKnown RBP17.4■□□□□ 0.38
CHMP4A-203ENST00000527154 UBL7Q96S82 380 aaPredicted RBP17.4■□□□□ 0.38
CHMP4A-203ENST00000527154 REEP2Q9BRK0 252 aa17.4■□□□□ 0.38
CHMP4A-203ENST00000527154 ST6GALNAC4Q9H4F1 302 aa17.4■□□□□ 0.38
CHMP4A-203ENST00000527154 ANKRD63C9JTQ0 380 aa17.39■□□□□ 0.37
CHMP4A-203ENST00000527154 ZNF217O75362 1048 aa17.39■□□□□ 0.37
CHMP4A-203ENST00000527154 ADH1CP00326 375 aa17.39■□□□□ 0.37
CHMP4A-203ENST00000527154 ACAT1P24752 427 aaKnown RBP17.39■□□□□ 0.37
CHMP4A-203ENST00000527154 ABCD1P33897 745 aa17.39■□□□□ 0.37
CHMP4A-203ENST00000527154 PPP3CCP48454 512 aa17.39■□□□□ 0.37
CHMP4A-203ENST00000527154 USP46P62068 366 aa17.39■□□□□ 0.37
CHMP4A-203ENST00000527154 MYL7Q01449 175 aa17.39■□□□□ 0.37
CHMP4A-203ENST00000527154 LRRC52Q8N7C0 313 aa17.39■□□□□ 0.37
CHMP4A-203ENST00000527154 TRIML1Q8N9V2 468 aa17.39■□□□□ 0.37
CHMP4A-203ENST00000527154 DNASE2BQ8WZ79 361 aa17.39■□□□□ 0.37
CHMP4A-203ENST00000527154 HSPA12BQ96MM6 686 aa17.39■□□□□ 0.37
CHMP4A-203ENST00000527154 ZDHHC4Q9NPG8 344 aa17.39■□□□□ 0.37
CHMP4A-203ENST00000527154 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.39■□□□□ 0.37
CHMP4A-203ENST00000527154 SUSD2Q9UGT4 822 aa17.39■□□□□ 0.37
CHMP4A-203ENST00000527154 CIZ1Q9ULV3 898 aaPredicted RBP17.39■□□□□ 0.37
CHMP4A-203ENST00000527154 NOL7Q9UMY1 257 aaKnown RBP17.39■□□□□ 0.37
CHMP4A-203ENST00000527154 PCDHB9Q9Y5E1 797 aa17.39■□□□□ 0.37
CHMP4A-203ENST00000527154 EIF4E1BA6NMX2 242 aaKnown RBP17.38■□□□□ 0.37
CHMP4A-203ENST00000527154 TISP43B9A030 160 aa17.38■□□□□ 0.37
CHMP4A-203ENST00000527154 HOXC11O43248 304 aaPredicted RBP17.38■□□□□ 0.37
CHMP4A-203ENST00000527154 ADH5P11766 374 aa17.38■□□□□ 0.37
CHMP4A-203ENST00000527154 WNT7BP56706 349 aa17.38■□□□□ 0.37
CHMP4A-203ENST00000527154 NOP14P78316 857 aaKnown RBP17.38■□□□□ 0.37
CHMP4A-203ENST00000527154 C19orf57Q0VDD7 668 aa17.38■□□□□ 0.37
CHMP4A-203ENST00000527154 GRIK2Q13002 908 aa17.38■□□□□ 0.37
CHMP4A-203ENST00000527154 SCARA3Q6AZY7 606 aa17.38■□□□□ 0.37
CHMP4A-203ENST00000527154 DTHD1Q6ZMT9 781 aa17.38■□□□□ 0.37
CHMP4A-203ENST00000527154 MIB1Q86YT6 1006 aa17.38■□□□□ 0.37
CHMP4A-203ENST00000527154 DEFB119Q8N690 84 aa17.38■□□□□ 0.37
CHMP4A-203ENST00000527154 TOP6BLQ8N6T0 577 aa17.38■□□□□ 0.37
CHMP4A-203ENST00000527154 C1orf127Q8N9H9 656 aa17.38■□□□□ 0.37
CHMP4A-203ENST00000527154 LSM14AQ8ND56 463 aaKnown RBP17.38■□□□□ 0.37
CHMP4A-203ENST00000527154 TTC16Q8NEE8 873 aa17.38■□□□□ 0.37
CHMP4A-203ENST00000527154 OTUB2Q96DC9 234 aa17.38■□□□□ 0.37
CHMP4A-203ENST00000527154 CPQQ9Y646 472 aa17.38■□□□□ 0.37
CHMP4A-203ENST00000527154 MYOFQ9NZM1 2061 aa17.38■□□□□ 0.37
CHMP4A-203ENST00000527154 K7ENM7 598 aa17.37■□□□□ 0.37
CHMP4A-203ENST00000527154 TRAK2O60296 914 aa17.37■□□□□ 0.37
CHMP4A-203ENST00000527154 IL18RAPO95256 599 aa17.37■□□□□ 0.37
CHMP4A-203ENST00000527154 PCSK1P29120 753 aa17.37■□□□□ 0.37
CHMP4A-203ENST00000527154 ADSSP30520 456 aa17.37■□□□□ 0.37
CHMP4A-203ENST00000527154 LHX1P48742 406 aa17.37■□□□□ 0.37
CHMP4A-203ENST00000527154 PLEKHG6Q3KR16 790 aa17.37■□□□□ 0.37
CHMP4A-203ENST00000527154 ADALQ6DHV7 355 aa17.37■□□□□ 0.37
CHMP4A-203ENST00000527154 SLFN12LQ6IEE8 588 aa17.37■□□□□ 0.37
CHMP4A-203ENST00000527154 DENND5BQ6ZUT9 1274 aa17.37■□□□□ 0.37
CHMP4A-203ENST00000527154 SPATA2LQ8IUW3 424 aaPredicted RBP17.37■□□□□ 0.37
CHMP4A-203ENST00000527154 PGBD3Q8N328 593 aa17.37■□□□□ 0.37
CHMP4A-203ENST00000527154 ZNF513Q8N8E2 541 aaPredicted RBP17.37■□□□□ 0.37
CHMP4A-203ENST00000527154 TERB1Q8NA31 727 aa17.37■□□□□ 0.37
CHMP4A-203ENST00000527154 CRELD1Q96HD1 420 aa17.37■□□□□ 0.37
CHMP4A-203ENST00000527154 ZFRQ96KR1 1074 aaKnown RBP17.37■□□□□ 0.37
CHMP4A-203ENST00000527154 GABRG3Q99928 467 aa17.37■□□□□ 0.37
CHMP4A-203ENST00000527154 LLPHQ9BRT6 129 aaKnown RBP17.37■□□□□ 0.37
CHMP4A-203ENST00000527154 PARVGQ9HBI0 331 aa17.37■□□□□ 0.37
CHMP4A-203ENST00000527154 TRPM5Q9NZQ8 1165 aa17.37■□□□□ 0.37
CHMP4A-203ENST00000527154 TBC1D14Q9P2M4 693 aa17.37■□□□□ 0.37
CHMP4A-203ENST00000527154 AGO2Q9UKV8 859 aaKnown RBP17.37■□□□□ 0.37
CHMP4A-203ENST00000527154 TENM4Q6N022 2769 aa17.37■□□□□ 0.37
CHMP4A-203ENST00000527154 ZNF462Q96JM2 2506 aa17.37■□□□□ 0.37
CHMP4A-203ENST00000527154 E2F8A0AVK6 867 aa17.36■□□□□ 0.37
CHMP4A-203ENST00000527154 SLC26A4O43511 780 aa17.36■□□□□ 0.37
CHMP4A-203ENST00000527154 HCRTO43612 131 aa17.36■□□□□ 0.37
CHMP4A-203ENST00000527154 HOXB2P14652 356 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms