RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 ARL2BPQ9Y2Y0 163 aa18.39■□□□□ 0.53
USH1C-205ENST00000527020 PDCD11Q14690 1871 aaKnown RBP18.38■□□□□ 0.53
USH1C-205ENST00000527020 GRAP2O75791 330 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 CDH6P55285 790 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 IL9RQ01113 521 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 MGAT5Q09328 741 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 DPYSL3Q14195 570 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 NOMO1Q15155 1222 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 OR6B2Q6IFH4 312 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 USP50Q70EL3 339 aaPredicted RBP18.38■□□□□ 0.53
USH1C-205ENST00000527020 PYROXD1Q8WU10 500 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 DHRS4Q9BTZ2 278 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 NT5C1AQ9BXI3 368 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 MAK16Q9BXY0 300 aaKnown RBP18.38■□□□□ 0.53
USH1C-205ENST00000527020 ADAM33Q9BZ11 813 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 PPCSQ9HAB8 311 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 PPEF2O14830 753 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 MCF2LO15068 1137 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 TYROBPO43914 113 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 PDGFRAP16234 1089 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 KRT15P19012 456 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 RPA3P35244 121 aaPredicted RBP18.38■□□□□ 0.53
USH1C-205ENST00000527020 GRM5P41594 1212 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 RGS7P49802 495 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 GEMIN4P57678 1058 aaKnown RBP18.38■□□□□ 0.53
USH1C-205ENST00000527020 MTM1Q13496 603 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 GRIK4Q16099 956 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 GOLGA7BQ2TAP0 167 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 PKDCCQ504Y2 493 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 FBXO36Q8NEA4 188 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 ZC3H15Q8WU90 426 aaKnown RBP18.38■□□□□ 0.53
USH1C-205ENST00000527020 RMDN2Q96LZ7 410 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 FAM124BQ9H5Z6 455 aaPredicted RBP18.38■□□□□ 0.53
USH1C-205ENST00000527020 SENP1Q9P0U3 644 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 FETUBQ9UGM5 382 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 KIAA1257Q9ULG3 409 aa18.38■□□□□ 0.53
USH1C-205ENST00000527020 PIAS1O75925 651 aa18.37■□□□□ 0.53
USH1C-205ENST00000527020 IL4RP24394 825 aa18.37■□□□□ 0.53
USH1C-205ENST00000527020 SLC1A5Q15758 541 aa18.37■□□□□ 0.53
USH1C-205ENST00000527020 CDO1Q16878 200 aa18.37■□□□□ 0.53
USH1C-205ENST00000527020 CCDC14Q49A88 953 aa18.37■□□□□ 0.53
USH1C-205ENST00000527020 FAM182AQ5T1J6 154 aa18.37■□□□□ 0.53
USH1C-205ENST00000527020 PPP1R26Q5T8A7 1209 aaPredicted RBP18.37■□□□□ 0.53
USH1C-205ENST00000527020 C9orf131Q5VYM1 1079 aa18.37■□□□□ 0.53
USH1C-205ENST00000527020 PMF1Q6P1K2 205 aa18.37■□□□□ 0.53
USH1C-205ENST00000527020 NT5DC4Q86YG4 428 aa18.37■□□□□ 0.53
USH1C-205ENST00000527020 ATP11CQ8NB49 1132 aa18.37■□□□□ 0.53
USH1C-205ENST00000527020 SPOCK2Q92563 424 aa18.37■□□□□ 0.53
USH1C-205ENST00000527020 ZMAT2Q96NC0 199 aaKnown RBP18.37■□□□□ 0.53
USH1C-205ENST00000527020 PAIP2Q9BPZ3 127 aaKnown RBP18.37■□□□□ 0.53
USH1C-205ENST00000527020 MRPL45Q9BRJ2 306 aaKnown RBP18.37■□□□□ 0.53
USH1C-205ENST00000527020 ACSS3Q9H6R3 686 aa18.37■□□□□ 0.53
USH1C-205ENST00000527020 XPO7Q9UIA9 1087 aaKnown RBP18.37■□□□□ 0.53
USH1C-205ENST00000527020 PNMA3Q9UL41 463 aa18.37■□□□□ 0.53
USH1C-205ENST00000527020 GABBR2O75899 941 aa18.37■□□□□ 0.53
USH1C-205ENST00000527020 OLFML1Q6UWY5 402 aa18.37■□□□□ 0.53
USH1C-205ENST00000527020 C3orf62Q6ZUJ4 267 aa18.37■□□□□ 0.53
USH1C-205ENST00000527020 ZC3H18Q86VM9 953 aaKnown RBP18.37■□□□□ 0.53
USH1C-205ENST00000527020 TTC30AQ86WT1 665 aa18.37■□□□□ 0.53
USH1C-205ENST00000527020 ANKLE1Q8NAG6 615 aa18.37■□□□□ 0.53
USH1C-205ENST00000527020 MZB1Q8WU39 189 aa18.37■□□□□ 0.53
USH1C-205ENST00000527020 KHSRPQ92945 711 aaKnown RBP eCLIP18.37■□□□□ 0.53
USH1C-205ENST00000527020 SMC6Q96SB8 1091 aa18.37■□□□□ 0.53
USH1C-205ENST00000527020 SMG5Q9UPR3 1016 aaKnown RBP18.37■□□□□ 0.53
USH1C-205ENST00000527020 HOXD8P13378 290 aaPredicted RBP18.36■□□□□ 0.53
USH1C-205ENST00000527020 HOXA11P31270 313 aaPredicted RBP18.36■□□□□ 0.53
USH1C-205ENST00000527020 EPHX2P34913 555 aa18.36■□□□□ 0.53
USH1C-205ENST00000527020 NCALDP61601 193 aa18.36■□□□□ 0.53
USH1C-205ENST00000527020 ELF3P78545 371 aaPredicted RBP18.36■□□□□ 0.53
USH1C-205ENST00000527020 ROR1Q01973 937 aa18.36■□□□□ 0.53
USH1C-205ENST00000527020 ADGRD1Q6QNK2 874 aa18.36■□□□□ 0.53
USH1C-205ENST00000527020 RGS9BPQ6ZS82 235 aa18.36■□□□□ 0.53
USH1C-205ENST00000527020 FAM228AQ86W67 206 aa18.36■□□□□ 0.53
USH1C-205ENST00000527020 IGDCC3Q8IVU1 814 aa18.36■□□□□ 0.53
USH1C-205ENST00000527020 PARP9Q8IXQ6 854 aa18.36■□□□□ 0.53
USH1C-205ENST00000527020 FITM2Q8N6M3 262 aa18.36■□□□□ 0.53
USH1C-205ENST00000527020 FBF1Q8TES7 1133 aa18.36■□□□□ 0.53
USH1C-205ENST00000527020 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.35■□□□□ 0.53
USH1C-205ENST00000527020 DPYSL4O14531 572 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 NPTXRO95502 500 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 SMPD1P17405 629 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 CCNA1P78396 465 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 BASP1P80723 227 aaKnown RBP18.35■□□□□ 0.53
USH1C-205ENST00000527020 BNIP1Q12981 228 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 KCNJ11Q14654 390 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 BBS9Q3SYG4 887 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 FAM47EQ6ZV65 393 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 ZNF467Q7Z7K2 595 aaPredicted RBP18.35■□□□□ 0.53
USH1C-205ENST00000527020 ACOT1Q86TX2 421 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 TTC39CQ8N584 583 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 GTF3C2Q8WUA4 911 aaPredicted RBP18.35■□□□□ 0.53
USH1C-205ENST00000527020 L3MBTL3Q96JM7 780 aaPredicted RBP18.35■□□□□ 0.53
USH1C-205ENST00000527020 RNF157Q96PX1 679 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 PAFAH2Q99487 392 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 PITPNM3Q9BZ71 974 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 USP29Q9HBJ7 922 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 GPATCH2LQ9NWQ4 482 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 SMAPO00193 183 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 PDHXO00330 501 aa18.35■□□□□ 0.53
USH1C-205ENST00000527020 PRPSAP2O60256 369 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms