RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 INCA1Q0VD86 236 aa21.32■■□□□ 1
SMIM3-201ENST00000526627 NOMO1Q15155 1222 aa21.32■■□□□ 1
SMIM3-201ENST00000526627 BBS9Q3SYG4 887 aa21.32■■□□□ 1
SMIM3-201ENST00000526627 GJC2Q5T442 439 aaPredicted RBP21.32■■□□□ 1
SMIM3-201ENST00000526627 ASNSD1Q9NWL6 643 aa21.32■■□□□ 1
SMIM3-201ENST00000526627 KCNH4Q9UQ05 1017 aa21.32■■□□□ 1
SMIM3-201ENST00000526627 SPDYE5A6NIY4 337 aa21.31■■□□□ 1
SMIM3-201ENST00000526627 MCF2LO15068 1137 aa21.31■■□□□ 1
SMIM3-201ENST00000526627 DDNO94850 711 aaPredicted RBP21.31■■□□□ 1
SMIM3-201ENST00000526627 PFKMP08237 780 aa21.31■■□□□ 1
SMIM3-201ENST00000526627 ARF4P18085 180 aaPredicted RBP21.31■■□□□ 1
SMIM3-201ENST00000526627 IREB2P48200 963 aaKnown RBP21.31■■□□□ 1
SMIM3-201ENST00000526627 TTLL4Q14679 1199 aa21.31■■□□□ 1
SMIM3-201ENST00000526627 ZNF484Q5JVG2 852 aa21.31■■□□□ 1
SMIM3-201ENST00000526627 MYLK2Q9H1R3 596 aa21.31■■□□□ 1
SMIM3-201ENST00000526627 BARX2Q9UMQ3 279 aaPredicted RBP21.31■■□□□ 1
SMIM3-201ENST00000526627 PIK3R2O00459 728 aa21.3■■□□□ 1
SMIM3-201ENST00000526627 GPD1P21695 349 aa21.3■■□□□ 1
SMIM3-201ENST00000526627 NDST1P52848 882 aa21.3■■□□□ 1
SMIM3-201ENST00000526627 YARSP54577 528 aaKnown RBP21.3■■□□□ 1
SMIM3-201ENST00000526627 C15orf59Q2T9L4 293 aaPredicted RBP21.3■■□□□ 1
SMIM3-201ENST00000526627 LVRNQ6Q4G3 990 aa21.3■■□□□ 1
SMIM3-201ENST00000526627 CEP57Q86XR8 500 aa21.3■■□□□ 1
SMIM3-201ENST00000526627 ZNF276Q8N554 614 aa21.3■■□□□ 1
SMIM3-201ENST00000526627 RXFP2Q8WXD0 754 aa21.3■■□□□ 1
SMIM3-201ENST00000526627 CNPY3Q9BT09 278 aa21.3■■□□□ 1
SMIM3-201ENST00000526627 CYLDQ9NQC7 956 aa21.3■■□□□ 1
SMIM3-201ENST00000526627 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.3■■□□□ 1
SMIM3-201ENST00000526627 CHKBQ9Y259 395 aa21.3■■□□□ 1
SMIM3-201ENST00000526627 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.3■■□□□ 1
SMIM3-201ENST00000526627 SMAPO00193 183 aa21.3■■□□□ 1
SMIM3-201ENST00000526627 SLC8A1P32418 973 aa21.3■■□□□ 1
SMIM3-201ENST00000526627 SKIV2L2P42285 1042 aaKnown RBP21.3■■□□□ 1
SMIM3-201ENST00000526627 BASP1P80723 227 aaKnown RBP21.3■■□□□ 1
SMIM3-201ENST00000526627 RNASELQ05823 741 aaKnown RBP21.3■■□□□ 1
SMIM3-201ENST00000526627 KLHL38Q2WGJ6 581 aa21.3■■□□□ 1
SMIM3-201ENST00000526627 FAM182AQ5T1J6 154 aa21.3■■□□□ 1
SMIM3-201ENST00000526627 HHATQ5VTY9 493 aa21.3■■□□□ 1
SMIM3-201ENST00000526627 FAM183BPQ6ZVS7 135 aa21.3■■□□□ 1
SMIM3-201ENST00000526627 SULF1Q8IWU6 871 aa21.3■■□□□ 1
SMIM3-201ENST00000526627 LRRC8CQ8TDW0 803 aa21.3■■□□□ 1
SMIM3-201ENST00000526627 E5RJQ4 531 aa21.29■■□□□ 1
SMIM3-201ENST00000526627 UNC5CO95185 931 aa21.29■■□□□ 1
SMIM3-201ENST00000526627 VTNP04004 478 aa21.29■■□□□ 1
SMIM3-201ENST00000526627 LGALS2P05162 132 aa21.29■■□□□ 1
SMIM3-201ENST00000526627 TSHRP16473 764 aa21.29■■□□□ 1
SMIM3-201ENST00000526627 CDH6P55285 790 aa21.29■■□□□ 1
SMIM3-201ENST00000526627 TMEM132DQ14C87 1099 aa21.29■■□□□ 1
SMIM3-201ENST00000526627 E2F5Q15329 346 aa21.29■■□□□ 1
SMIM3-201ENST00000526627 LCLAT1Q6UWP7 414 aa21.29■■□□□ 1
SMIM3-201ENST00000526627 DPH6Q7L8W6 267 aa21.29■■□□□ 1
SMIM3-201ENST00000526627 CCDC91Q7Z6B0 441 aa21.29■■□□□ 1
SMIM3-201ENST00000526627 PDIK1LQ8N165 341 aa21.29■■□□□ 1
SMIM3-201ENST00000526627 ZNF75CPQ92670 426 aaPredicted RBP21.29■■□□□ 1
SMIM3-201ENST00000526627 DCPSQ96C86 337 aaKnown RBP21.29■■□□□ 1
SMIM3-201ENST00000526627 USH1CQ9Y6N9 552 aa21.29■■□□□ 1
SMIM3-201ENST00000526627 ZWINTO95229 277 aa21.29■■□□□ 1
SMIM3-201ENST00000526627 P4HA1P13674 534 aa21.29■■□□□ 1
SMIM3-201ENST00000526627 ROR1Q01973 937 aa21.29■■□□□ 1
SMIM3-201ENST00000526627 KCNJ11Q14654 390 aa21.29■■□□□ 1
SMIM3-201ENST00000526627 PALM2Q8IXS6 379 aa21.29■■□□□ 1
SMIM3-201ENST00000526627 C10orf82Q8WW14 230 aa21.29■■□□□ 1
SMIM3-201ENST00000526627 GBA2Q9HCG7 927 aaPredicted RBP21.29■■□□□ 1
SMIM3-201ENST00000526627 ADARB2Q9NS39 739 aaKnown RBP21.29■■□□□ 1
SMIM3-201ENST00000526627 TSPAN16Q9UKR8 245 aa21.29■■□□□ 1
SMIM3-201ENST00000526627 CHMP2BQ9UQN3 213 aa21.29■■□□□ 1
SMIM3-201ENST00000526627 PDGFRAP16234 1089 aa21.28■■□□□ 1
SMIM3-201ENST00000526627 ADRA1DP25100 572 aa21.28■■□□□ 1
SMIM3-201ENST00000526627 WDR78Q5VTH9 848 aa21.28■■□□□ 1
SMIM3-201ENST00000526627 OR6B2Q6IFH4 312 aa21.28■■□□□ 1
SMIM3-201ENST00000526627 MAMDC4Q6UXC1 1216 aa21.28■■□□□ 1
SMIM3-201ENST00000526627 OTOAQ7RTW8 1153 aa21.28■■□□□ 1
SMIM3-201ENST00000526627 ZC3H18Q86VM9 953 aaKnown RBP21.28■■□□□ 1
SMIM3-201ENST00000526627 AGGF1Q8N302 714 aaeCLIP21.28■■□□□ 1
SMIM3-201ENST00000526627 BANPQ8N9N5 519 aa21.28■■□□□ 1
SMIM3-201ENST00000526627 USP29Q9HBJ7 922 aa21.28■■□□□ 1
SMIM3-201ENST00000526627 A8MUI8 341 aa21.28■■□□□ 1
SMIM3-201ENST00000526627 IL4RP24394 825 aa21.28■■□□□ 1
SMIM3-201ENST00000526627 STIP1P31948 543 aaKnown RBP21.28■■□□□ 1
SMIM3-201ENST00000526627 ELK3P41970 407 aa21.28■■□□□ 1
SMIM3-201ENST00000526627 DARS2Q6PI48 645 aaKnown RBP21.28■■□□□ 1
SMIM3-201ENST00000526627 C12orf29Q8N999 325 aa21.28■■□□□ 1
SMIM3-201ENST00000526627 C12orf65Q9H3J6 166 aaKnown RBP21.28■■□□□ 1
SMIM3-201ENST00000526627 MROH8Q9H579 483 aa21.28■■□□□ 1
SMIM3-201ENST00000526627 DPP3Q9NY33 737 aa21.28■■□□□ 1
SMIM3-201ENST00000526627 GRAP2O75791 330 aa21.27■■□□□ 1
SMIM3-201ENST00000526627 STAU1O95793 577 aaKnown RBP21.27■■□□□ 1
SMIM3-201ENST00000526627 MSH2P43246 934 aa21.27■■□□□ 1
SMIM3-201ENST00000526627 ARMCX2Q7L311 632 aa21.27■■□□□ 1
SMIM3-201ENST00000526627 ANKRD13AQ8IZ07 590 aa21.27■■□□□ 1
SMIM3-201ENST00000526627 TCP10LQ8TDR4 215 aa21.27■■□□□ 1
SMIM3-201ENST00000526627 ERP27Q96DN0 273 aa21.27■■□□□ 1
SMIM3-201ENST00000526627 RNF157Q96PX1 679 aa21.27■■□□□ 1
SMIM3-201ENST00000526627 MCM8Q9UJA3 840 aa21.27■■□□□ 1
SMIM3-201ENST00000526627 ITGA11Q9UKX5 1188 aa21.27■■□□□ 1
SMIM3-201ENST00000526627 AKT3Q9Y243 479 aa21.27■■□□□ 1
SMIM3-201ENST00000526627 C2CD2Q9Y426 696 aa21.27■■□□□ 1
SMIM3-201ENST00000526627 TEX264Q9Y6I9 313 aa21.27■■□□□ 1
SMIM3-201ENST00000526627 PLXNA1Q9UIW2 1896 aa21.27■■□□□ 1
SMIM3-201ENST00000526627 RBP5P82980 135 aa21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms