RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 ZDBF2Q9HCK1 2354 aa17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 NCANO14594 1321 aa17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 TRAV19A0A0A6YYK7 116 aa17.15■□□□□ 0.34
SSSCA1-202ENST00000526433 KRBA1A5PL33 1030 aa17.15■□□□□ 0.34
SSSCA1-202ENST00000526433 C2orf78A6NCI8 922 aa17.15■□□□□ 0.34
SSSCA1-202ENST00000526433 HHLA1C9JL84 531 aa17.15■□□□□ 0.34
SSSCA1-202ENST00000526433 PAEPP09466 180 aa17.15■□□□□ 0.34
SSSCA1-202ENST00000526433 HDCP19113 662 aa17.15■□□□□ 0.34
SSSCA1-202ENST00000526433 PON1P27169 355 aa17.15■□□□□ 0.34
SSSCA1-202ENST00000526433 PFKPQ01813 784 aa17.15■□□□□ 0.34
SSSCA1-202ENST00000526433 APBA1Q02410 837 aa17.15■□□□□ 0.34
SSSCA1-202ENST00000526433 SLC44A4Q53GD3 710 aa17.15■□□□□ 0.34
SSSCA1-202ENST00000526433 IER5LQ5T953 404 aa17.15■□□□□ 0.34
SSSCA1-202ENST00000526433 CDKAL1Q5VV42 579 aa17.15■□□□□ 0.34
SSSCA1-202ENST00000526433 GJB7Q6PEY0 223 aa17.15■□□□□ 0.34
SSSCA1-202ENST00000526433 YAF2Q8IY57 180 aa17.15■□□□□ 0.34
SSSCA1-202ENST00000526433 SIX5Q8N196 739 aa17.15■□□□□ 0.34
SSSCA1-202ENST00000526433 CELF5Q8N6W0 485 aaKnown RBP17.15■□□□□ 0.34
SSSCA1-202ENST00000526433 ARL14EPQ8N8R7 260 aaPredicted RBP17.15■□□□□ 0.34
SSSCA1-202ENST00000526433 ANKRD52Q8NB46 1076 aa17.15■□□□□ 0.34
SSSCA1-202ENST00000526433 USP13Q92995 863 aaPredicted RBP17.15■□□□□ 0.34
SSSCA1-202ENST00000526433 SLC22A12Q96S37 553 aa17.15■□□□□ 0.34
SSSCA1-202ENST00000526433 TDP1Q9NUW8 608 aa17.15■□□□□ 0.34
SSSCA1-202ENST00000526433 FAM92AA1XBS5 289 aa17.14■□□□□ 0.33
SSSCA1-202ENST00000526433 PES1O00541 588 aaKnown RBP17.14■□□□□ 0.33
SSSCA1-202ENST00000526433 ZNF263O14978 683 aa17.14■□□□□ 0.33
SSSCA1-202ENST00000526433 LETM1O95202 739 aaPredicted RBP17.14■□□□□ 0.33
SSSCA1-202ENST00000526433 USP17L7P0C7H9 530 aa17.14■□□□□ 0.33
SSSCA1-202ENST00000526433 MFAP3P55082 362 aa17.14■□□□□ 0.33
SSSCA1-202ENST00000526433 MYL5Q02045 173 aa17.14■□□□□ 0.33
SSSCA1-202ENST00000526433 ENOSF1Q7L5Y1 443 aa17.14■□□□□ 0.33
SSSCA1-202ENST00000526433 GPRIN1Q7Z2K8 1008 aa17.14■□□□□ 0.33
SSSCA1-202ENST00000526433 FBXL6Q8N531 539 aa17.14■□□□□ 0.33
SSSCA1-202ENST00000526433 RBBP8NLQ8NC74 664 aaPredicted RBP17.14■□□□□ 0.33
SSSCA1-202ENST00000526433 PDZD8Q8NEN9 1154 aa17.14■□□□□ 0.33
SSSCA1-202ENST00000526433 BPIFB1Q8TDL5 484 aa17.14■□□□□ 0.33
SSSCA1-202ENST00000526433 OVCA2Q8WZ82 227 aa17.14■□□□□ 0.33
SSSCA1-202ENST00000526433 TFAP2BQ92481 460 aa17.14■□□□□ 0.33
SSSCA1-202ENST00000526433 IRF7Q92985 503 aa17.14■□□□□ 0.33
SSSCA1-202ENST00000526433 FAM81BQ96LP2 452 aa17.14■□□□□ 0.33
SSSCA1-202ENST00000526433 UBXN6Q9BZV1 441 aa17.14■□□□□ 0.33
SSSCA1-202ENST00000526433 MFSD1Q9H3U5 465 aa17.14■□□□□ 0.33
SSSCA1-202ENST00000526433 FBXO44Q9H4M3 255 aa17.14■□□□□ 0.33
SSSCA1-202ENST00000526433 TAB2Q9NYJ8 693 aa17.14■□□□□ 0.33
SSSCA1-202ENST00000526433 APEX2Q9UBZ4 518 aa17.14■□□□□ 0.33
SSSCA1-202ENST00000526433 CNTN6Q9UQ52 1028 aa17.14■□□□□ 0.33
SSSCA1-202ENST00000526433 CCL26Q9Y258 94 aa17.14■□□□□ 0.33
SSSCA1-202ENST00000526433 CHADO15335 359 aa17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 CALCAP01258 141 aa17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 CKMP06732 381 aa17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 KRT5P13647 590 aa17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 PFKLP17858 780 aa17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 KIF11P52732 1056 aa17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 FCHO2Q0JRZ9 810 aa17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 KCNMA1Q12791 1236 aa17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 ZNF268Q14587 947 aaPredicted RBP17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 NCAPHQ15003 741 aa17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 KRT31Q15323 416 aa17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 ARHGAP44Q17R89 818 aa17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 GOLGA7BQ2TAP0 167 aa17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 ANO6Q4KMQ2 910 aa17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 TTC30AQ86WT1 665 aa17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 UBA3Q8TBC4 463 aa17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 NAT10Q9H0A0 1025 aaKnown RBP17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 RNF38Q9H0F5 515 aa17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 VPS16Q9H269 839 aa17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 PNPLA8Q9NP80 782 aa17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 SIX2Q9NPC8 291 aa17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 ARHGEF3Q9NR81 526 aa17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 GMIPQ9P107 970 aa17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 HESX1Q9UBX0 185 aa17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 TSPAN16Q9UKR8 245 aa17.13■□□□□ 0.33
SSSCA1-202ENST00000526433 O00370 1275 aa17.12■□□□□ 0.33
SSSCA1-202ENST00000526433 STK25O00506 426 aa17.12■□□□□ 0.33
SSSCA1-202ENST00000526433 ZDHHC11BP0C7U3 371 aa17.12■□□□□ 0.33
SSSCA1-202ENST00000526433 PDE6CP51160 858 aa17.12■□□□□ 0.33
SSSCA1-202ENST00000526433 ZNF132P52740 706 aa17.12■□□□□ 0.33
SSSCA1-202ENST00000526433 SLC8A3P57103 927 aa17.12■□□□□ 0.33
SSSCA1-202ENST00000526433 PDE4CQ08493 712 aa17.12■□□□□ 0.33
SSSCA1-202ENST00000526433 CNGA2Q16280 664 aa17.12■□□□□ 0.33
SSSCA1-202ENST00000526433 ARHGAP29Q52LW3 1261 aa17.12■□□□□ 0.33
SSSCA1-202ENST00000526433 SNX30Q5VWJ9 437 aa17.12■□□□□ 0.33
SSSCA1-202ENST00000526433 LCLAT1Q6UWP7 414 aa17.12■□□□□ 0.33
SSSCA1-202ENST00000526433 PIGZQ86VD9 579 aa17.12■□□□□ 0.33
SSSCA1-202ENST00000526433 SUGP1Q8IWZ8 645 aaKnown RBP17.12■□□□□ 0.33
SSSCA1-202ENST00000526433 FLCNQ8NFG4 579 aa17.12■□□□□ 0.33
SSSCA1-202ENST00000526433 DNASE1L2Q92874 299 aa17.12■□□□□ 0.33
SSSCA1-202ENST00000526433 ZSWIM1Q9BR11 485 aa17.12■□□□□ 0.33
SSSCA1-202ENST00000526433 KIF9Q9HAQ2 790 aa17.12■□□□□ 0.33
SSSCA1-202ENST00000526433 TRPV5Q9NQA5 729 aa17.12■□□□□ 0.33
SSSCA1-202ENST00000526433 THG1LQ9NWX6 298 aaKnown RBP17.12■□□□□ 0.33
SSSCA1-202ENST00000526433 SCML2Q9UQR0 700 aa17.12■□□□□ 0.33
SSSCA1-202ENST00000526433 F5P12259 2224 aa17.12■□□□□ 0.33
SSSCA1-202ENST00000526433 PATJQ8NI35 1801 aa17.12■□□□□ 0.33
SSSCA1-202ENST00000526433 TPM2P07951 284 aa17.11■□□□□ 0.33
SSSCA1-202ENST00000526433 CDK11BP21127 795 aaKnown RBP17.11■□□□□ 0.33
SSSCA1-202ENST00000526433 BRD2P25440 801 aaKnown RBP17.11■□□□□ 0.33
SSSCA1-202ENST00000526433 PGFP49763 221 aa17.11■□□□□ 0.33
SSSCA1-202ENST00000526433 BCAT1P54687 386 aa17.11■□□□□ 0.33
SSSCA1-202ENST00000526433 STARD6P59095 220 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms