RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 PCDHGA4Q9Y5G9 962 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-213ENST00000526357 IQCA1LA6NCM1 817 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 MEI4A8MW99 385 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 F5H5T6 163 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 PSMD12O00232 456 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-213ENST00000526357 RPS6KA4O75676 772 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 CTSHP09668 335 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 CPA2P48052 419 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 RAD23AP54725 363 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 GRIK3Q13003 919 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 ZNF284Q2VY69 593 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 ZNF57Q68EA5 555 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-213ENST00000526357 CDC73Q6P1J9 531 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 BNIPLQ7Z465 357 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 KCTD10Q9H3F6 313 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.74□□□□□ -0.853e-7■■□□□ 14.4
CTNND1-213ENST00000526357 DUSP12Q9UNI6 340 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 SH3GLB1Q9Y371 365 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 SF3B1O75533 1304 aaKnown RBP eCLIP9.74□□□□□ -0.855e-6■■■■■ 59.8
CTNND1-213ENST00000526357 CFAP74Q9C0B2 1584 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 CLASP1Q7Z460 1538 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 TMEM2Q9UHN6 1383 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 TRIM49D1C9J1S8 452 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 TBX3O15119 743 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 ZW10O43264 779 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 GRAP2O75791 330 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 AKR1B1P15121 316 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 COILP38432 576 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-213ENST00000526357 TSNQ15631 228 aaKnown RBP9.74□□□□□ -0.85
CTNND1-213ENST00000526357 PLEKHA7Q6IQ23 1121 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 KLHL17Q6TDP4 642 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 CASP12Q6UXS9 341 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 PEG10Q86TG7 708 aaKnown RBP9.74□□□□□ -0.85
CTNND1-213ENST00000526357 LRRC49Q8IUZ0 686 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 ELOA2Q8IYF1 753 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-213ENST00000526357 CACTIN-AS1Q8N1I8 211 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 SPIRE2Q8WWL2 714 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 S100A13Q99584 98 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 KLF6Q99612 283 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-213ENST00000526357 COLEC11Q9BWP8 271 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 WDCPQ9H6R7 721 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 AHSPQ9NZD4 102 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 PALLDQ8WX93 1383 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 GNG14A0A1W2PPG7 69 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 TPST1O60507 370 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 IL6P05231 212 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 UCHL3P15374 230 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 COMTP21964 271 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 STIP1P31948 543 aaKnown RBP9.74□□□□□ -0.85
CTNND1-213ENST00000526357 GRK4P32298 578 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 RCN1Q15293 331 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 DGKDQ16760 1214 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 CCDC144BQ3MJ40 725 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 PMF1Q6P1K2 205 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 SCUBE1Q8IWY4 988 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 ATG16L2Q8NAA4 619 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 BLOC1S5Q8TDH9 187 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 CCDC3Q9BQI4 270 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 MINPP1Q9UNW1 487 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 ADGBQ8N7X0 1667 aa9.74□□□□□ -0.85
CTNND1-213ENST00000526357 CNTFP26441 200 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 NOS3P29474 1203 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 TRIM32Q13049 653 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 GPAT2Q6NUI2 795 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 CDH24Q86UP0 819 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 UBA3Q8TBC4 463 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 OSCP1Q8WVF1 389 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 MAGEB18Q96M61 343 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 A0A1W2PQJ5 194 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 RAD51CO43502 376 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 PSTPIP1O43586 416 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 HLA-DRAP01903 254 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 TNNI3P19429 210 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 ITGALP20701 1170 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 MAPKAPK2P49137 400 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 TAB1Q15750 504 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 BARGINQ6ZT62 677 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 PARK7Q99497 189 aaKnown RBP9.73□□□□□ -0.85
CTNND1-213ENST00000526357 ERP44Q9BS26 406 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 GANQ9H2C0 597 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 FAM49BQ9NUQ9 324 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 PRMT7Q9NVM4 692 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-213ENST00000526357 TRPM5Q9NZQ8 1165 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 RNF181Q9P0P0 153 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 PHTF1Q9UMS5 762 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 NCF1BA6NI72 391 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-213ENST00000526357 NCF1CA8MVU1 366 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-213ENST00000526357 SMIM22K7EJ46 135 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 KPNA4O00629 521 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-213ENST00000526357 DYNC1LI2O43237 492 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-213ENST00000526357 SKAP2O75563 359 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-213ENST00000526357 CRTAMO95727 393 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 RBP1P09455 135 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 NCF1P14598 390 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-213ENST00000526357 TARSP26639 723 aaKnown RBP9.73□□□□□ -0.85
CTNND1-213ENST00000526357 CTCFP49711 727 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-213ENST00000526357 TAF6P49848 677 aa9.73□□□□□ -0.85
CTNND1-213ENST00000526357 MAD2L1Q13257 205 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-213ENST00000526357 BOLA3Q53S33 107 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms