RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 P2RY11Q96G91 374 aa15.25■□□□□ 0.03
CPSF1-201ENST00000526271 ZNF518BQ9C0D4 1074 aa15.25■□□□□ 0.03
CPSF1-201ENST00000526271 FSCN3Q9NQT6 498 aa15.25■□□□□ 0.03
CPSF1-201ENST00000526271 SMPD4Q9NXE4 827 aa15.25■□□□□ 0.03
CPSF1-201ENST00000526271 CDH9Q9ULB4 789 aa15.25■□□□□ 0.03
CPSF1-201ENST00000526271 CPQQ9Y646 472 aa15.25■□□□□ 0.03
CPSF1-201ENST00000526271 FASNP49327 2511 aaKnown RBP15.25■□□□□ 0.03
CPSF1-201ENST00000526271 ANKRD11Q6UB99 2663 aaPredicted RBP15.24■□□□□ 0.03
CPSF1-201ENST00000526271 A0A0A0MRY4 1105 aa15.24■□□□□ 0.03
CPSF1-201ENST00000526271 VPS37CA5D8V6 355 aaPredicted RBP15.24■□□□□ 0.03
CPSF1-201ENST00000526271 TULP1O00294 542 aaPredicted RBP15.24■□□□□ 0.03
CPSF1-201ENST00000526271 CLDN5O00501 218 aa15.24■□□□□ 0.03
CPSF1-201ENST00000526271 TRIM24O15164 1050 aa15.24■□□□□ 0.03
CPSF1-201ENST00000526271 LDHAP00338 332 aaKnown RBP15.24■□□□□ 0.03
CPSF1-201ENST00000526271 IDEP14735 1019 aa15.24■□□□□ 0.03
CPSF1-201ENST00000526271 PCSK1P29120 753 aa15.24■□□□□ 0.03
CPSF1-201ENST00000526271 GBP1P32455 592 aa15.24■□□□□ 0.03
CPSF1-201ENST00000526271 PTGER3P43115 390 aa15.24■□□□□ 0.03
CPSF1-201ENST00000526271 AMPD2Q01433 879 aa15.24■□□□□ 0.03
CPSF1-201ENST00000526271 CEBPZQ03701 1054 aaKnown RBP15.24■□□□□ 0.03
CPSF1-201ENST00000526271 ZNF252P-AS1Q0IIN9 211 aa15.24■□□□□ 0.03
CPSF1-201ENST00000526271 KCNB1Q14721 858 aa15.24■□□□□ 0.03
CPSF1-201ENST00000526271 ELF2Q15723 593 aa15.24■□□□□ 0.03
CPSF1-201ENST00000526271 MDH1BQ5I0G3 518 aa15.24■□□□□ 0.03
CPSF1-201ENST00000526271 VSTM1Q6UX27 236 aa15.24■□□□□ 0.03
CPSF1-201ENST00000526271 PAQR9Q6ZVX9 377 aa15.24■□□□□ 0.03
CPSF1-201ENST00000526271 DPH6Q7L8W6 267 aa15.24■□□□□ 0.03
CPSF1-201ENST00000526271 MIB1Q86YT6 1006 aa15.24■□□□□ 0.03
CPSF1-201ENST00000526271 MYCBPAPQ8TBZ2 947 aa15.24■□□□□ 0.03
CPSF1-201ENST00000526271 NOC3LQ8WTT2 800 aaKnown RBP15.24■□□□□ 0.03
CPSF1-201ENST00000526271 GATA6Q92908 595 aa15.24■□□□□ 0.03
CPSF1-201ENST00000526271 TRIM9Q9C026 710 aa15.24■□□□□ 0.03
CPSF1-201ENST00000526271 XYLT2Q9H1B5 865 aa15.24■□□□□ 0.03
CPSF1-201ENST00000526271 CD248Q9HCU0 757 aa15.24■□□□□ 0.03
CPSF1-201ENST00000526271 PANK4Q9NVE7 773 aa15.24■□□□□ 0.03
CPSF1-201ENST00000526271 MAGEC2Q9UBF1 373 aaPredicted RBP15.24■□□□□ 0.03
CPSF1-201ENST00000526271 EXOC7Q9UPT5 735 aa15.24■□□□□ 0.03
CPSF1-201ENST00000526271 RHOBTB1O94844 696 aa15.23■□□□□ 0.03
CPSF1-201ENST00000526271 TMEM191BP0C7N4 346 aa15.23■□□□□ 0.03
CPSF1-201ENST00000526271 GRIK1P39086 918 aa15.23■□□□□ 0.03
CPSF1-201ENST00000526271 P2RY2P41231 377 aa15.23■□□□□ 0.03
CPSF1-201ENST00000526271 NOP14P78316 857 aaKnown RBP15.23■□□□□ 0.03
CPSF1-201ENST00000526271 CYP27A1Q02318 531 aa15.23■□□□□ 0.03
CPSF1-201ENST00000526271 TAF10Q12962 218 aa15.23■□□□□ 0.03
CPSF1-201ENST00000526271 UNQ6494/PRO21346Q6UXR6 183 aa15.23■□□□□ 0.03
CPSF1-201ENST00000526271 TRAPPC11Q7Z392 1133 aa15.23■□□□□ 0.03
CPSF1-201ENST00000526271 KDF1Q8NAX2 398 aaPredicted RBP15.23■□□□□ 0.03
CPSF1-201ENST00000526271 TXNDC5Q8NBS9 432 aaKnown RBP15.23■□□□□ 0.03
CPSF1-201ENST00000526271 C8orf48Q96LL4 319 aa15.23■□□□□ 0.03
CPSF1-201ENST00000526271 B3GNT5Q9BYG0 378 aa15.23■□□□□ 0.03
CPSF1-201ENST00000526271 HSPBP1Q9NZL4 362 aa15.23■□□□□ 0.03
CPSF1-201ENST00000526271 ZMIZ1Q9ULJ6 1067 aa15.23■□□□□ 0.03
CPSF1-201ENST00000526271 PCDHB13Q9Y5F0 798 aa15.23■□□□□ 0.03
CPSF1-201ENST00000526271 MORC2Q9Y6X9 1032 aaPredicted RBP15.23■□□□□ 0.03
CPSF1-201ENST00000526271 ATXN2Q99700 1313 aaKnown RBP15.22■□□□□ 0.03
CPSF1-201ENST00000526271 GREM1O60565 184 aa15.22■□□□□ 0.03
CPSF1-201ENST00000526271 KLF8O95600 359 aaPredicted RBP15.22■□□□□ 0.03
CPSF1-201ENST00000526271 NFATC1O95644 943 aa15.22■□□□□ 0.03
CPSF1-201ENST00000526271 SYT1P21579 422 aa15.22■□□□□ 0.03
CPSF1-201ENST00000526271 TIE1P35590 1138 aa15.22■□□□□ 0.03
CPSF1-201ENST00000526271 EHHADHQ08426 723 aa15.22■□□□□ 0.03
CPSF1-201ENST00000526271 FOXC1Q12948 553 aa15.22■□□□□ 0.03
CPSF1-201ENST00000526271 C4orf50Q6ZRC1 276 aa15.22■□□□□ 0.03
CPSF1-201ENST00000526271 ETFBKMTQ8IXQ9 262 aa15.22■□□□□ 0.03
CPSF1-201ENST00000526271 SYCP3Q8IZU3 236 aa15.22■□□□□ 0.03
CPSF1-201ENST00000526271 PDILTQ8N807 584 aa15.22■□□□□ 0.03
CPSF1-201ENST00000526271 DEFB124Q8NES8 71 aa15.22■□□□□ 0.03
CPSF1-201ENST00000526271 KCNK16Q96T55 309 aa15.22■□□□□ 0.03
CPSF1-201ENST00000526271 SDCBP2Q9H190 292 aa15.22■□□□□ 0.03
CPSF1-201ENST00000526271 TRPM5Q9NZQ8 1165 aa15.22■□□□□ 0.03
CPSF1-201ENST00000526271 CFAP97Q9P2B7 532 aa15.22■□□□□ 0.03
CPSF1-201ENST00000526271 CCDC39Q9UFE4 941 aa15.22■□□□□ 0.03
CPSF1-201ENST00000526271 MTMR6Q9Y217 621 aa15.22■□□□□ 0.03
CPSF1-201ENST00000526271 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.21■□□□□ 0.03
CPSF1-201ENST00000526271 TNFRSF10BO14763 440 aa15.21■□□□□ 0.03
CPSF1-201ENST00000526271 TACC1O75410 805 aa15.21■□□□□ 0.03
CPSF1-201ENST00000526271 KAT7O95251 611 aa15.21■□□□□ 0.03
CPSF1-201ENST00000526271 CSRP1P21291 193 aaKnown RBP15.21■□□□□ 0.03
CPSF1-201ENST00000526271 CASP1P29466 404 aa15.21■□□□□ 0.03
CPSF1-201ENST00000526271 DHPSP49366 369 aaPredicted RBP15.21■□□□□ 0.03
CPSF1-201ENST00000526271 FAM193AP78312 1265 aa15.21■□□□□ 0.03
CPSF1-201ENST00000526271 MRPS21P82921 87 aaKnown RBP15.21■□□□□ 0.03
CPSF1-201ENST00000526271 KDSRQ06136 332 aa15.21■□□□□ 0.03
CPSF1-201ENST00000526271 SLC39A14Q15043 492 aa15.21■□□□□ 0.03
CPSF1-201ENST00000526271 USP39Q53GS9 565 aaKnown RBP15.21■□□□□ 0.03
CPSF1-201ENST00000526271 LY6G5CQ5SRR4 150 aa15.21■□□□□ 0.03
CPSF1-201ENST00000526271 PEAR1Q5VY43 1037 aaPredicted RBP15.21■□□□□ 0.03
CPSF1-201ENST00000526271 ARMCX6Q7L4S7 300 aa15.21■□□□□ 0.03
CPSF1-201ENST00000526271 CYP2U1Q7Z449 544 aa15.21■□□□□ 0.03
CPSF1-201ENST00000526271 WDR49Q8IV35 697 aa15.21■□□□□ 0.03
CPSF1-201ENST00000526271 TMEFF1Q8IYR6 380 aa15.21■□□□□ 0.03
CPSF1-201ENST00000526271 ZMIZ2Q8NF64 920 aa15.21■□□□□ 0.03
CPSF1-201ENST00000526271 SCAMP5Q8TAC9 235 aa15.21■□□□□ 0.03
CPSF1-201ENST00000526271 PIGKQ92643 395 aa15.21■□□□□ 0.03
CPSF1-201ENST00000526271 ANKRD36BP1Q96IX9 119 aa15.21■□□□□ 0.03
CPSF1-201ENST00000526271 CD93Q9NPY3 652 aa15.21■□□□□ 0.03
CPSF1-201ENST00000526271 TMEM9BQ9NQ34 198 aa15.21■□□□□ 0.03
CPSF1-201ENST00000526271 KBTBD4Q9NVX7 518 aa15.21■□□□□ 0.03
CPSF1-201ENST00000526271 IL37Q9NZH6 218 aa15.21■□□□□ 0.03
CPSF1-201ENST00000526271 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms