RNA–Protein interactions for RNA: ENST00000525987.5

SDHD-211, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 4

Gene SDHD, Length 968 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-211ENST00000525987 FNBP1Q96RU3 617 aa13.35□□□□□ -0.27
SDHD-211ENST00000525987 KCNK16Q96T55 309 aa13.35□□□□□ -0.27
SDHD-211ENST00000525987 GOLPH3LQ9H4A5 285 aa13.35□□□□□ -0.27
SDHD-211ENST00000525987 FAM13BQ9NYF5 915 aa13.35□□□□□ -0.27
SDHD-211ENST00000525987 NXF1Q9UBU9 619 aaKnown RBP13.35□□□□□ -0.27
SDHD-211ENST00000525987 K7EQS6 105 aa13.34□□□□□ -0.27
SDHD-211ENST00000525987 GDF9O60383 454 aa13.34□□□□□ -0.27
SDHD-211ENST00000525987 EXOC3O60645 756 aa13.34□□□□□ -0.27
SDHD-211ENST00000525987 BEST1O76090 585 aa13.34□□□□□ -0.27
SDHD-211ENST00000525987 RETP07949 1114 aa13.34□□□□□ -0.27
SDHD-211ENST00000525987 HNRNPLP14866 589 aaKnown RBP eCLIP13.34□□□□□ -0.27
SDHD-211ENST00000525987 CMA1P23946 247 aa13.34□□□□□ -0.27
SDHD-211ENST00000525987 NDUFA8P51970 172 aa13.34□□□□□ -0.27
SDHD-211ENST00000525987 SLC7A9P82251 487 aa13.34□□□□□ -0.27
SDHD-211ENST00000525987 TAF10Q12962 218 aa13.34□□□□□ -0.27
SDHD-211ENST00000525987 ORC1Q13415 861 aa13.34□□□□□ -0.27
SDHD-211ENST00000525987 SCARA5Q6ZMJ2 495 aa13.34□□□□□ -0.27
SDHD-211ENST00000525987 HS2ST1Q7LGA3 356 aa13.34□□□□□ -0.27
SDHD-211ENST00000525987 FUKQ8N0W3 1084 aa13.34□□□□□ -0.27
SDHD-211ENST00000525987 TTC16Q8NEE8 873 aa13.34□□□□□ -0.27
SDHD-211ENST00000525987 P2RY13Q9BPV8 354 aa13.34□□□□□ -0.27
SDHD-211ENST00000525987 SNX25Q9H3E2 840 aa13.34□□□□□ -0.27
SDHD-211ENST00000525987 IL37Q9NZH6 218 aa13.34□□□□□ -0.27
SDHD-211ENST00000525987 CGNQ9P2M7 1197 aaKnown RBP13.34□□□□□ -0.27
SDHD-211ENST00000525987 CACNA1BQ00975 2339 aa13.34□□□□□ -0.27
SDHD-211ENST00000525987 A8MXQ7 604 aa13.33□□□□□ -0.28
SDHD-211ENST00000525987 TRIM66O15016 1216 aa13.33□□□□□ -0.28
SDHD-211ENST00000525987 CYP17A1P05093 508 aa13.33□□□□□ -0.28
SDHD-211ENST00000525987 ATICP31939 592 aa13.33□□□□□ -0.28
SDHD-211ENST00000525987 ASPAP45381 313 aa13.33□□□□□ -0.28
SDHD-211ENST00000525987 TNNC1P63316 161 aa13.33□□□□□ -0.28
SDHD-211ENST00000525987 GRSF1Q12849 480 aaKnown RBP eCLIP13.33□□□□□ -0.28
SDHD-211ENST00000525987 NCOA4Q13772 614 aa13.33□□□□□ -0.28
SDHD-211ENST00000525987 MAPRE1Q15691 268 aaKnown RBP13.33□□□□□ -0.28
SDHD-211ENST00000525987 ZACNQ401N2 412 aa13.33□□□□□ -0.28
SDHD-211ENST00000525987 CC2D1AQ6P1N0 951 aaPredicted RBP13.33□□□□□ -0.28
SDHD-211ENST00000525987 FILIP1Q7Z7B0 1213 aa13.33□□□□□ -0.28
SDHD-211ENST00000525987 FAM35AQ86V20 835 aa13.33□□□□□ -0.28
SDHD-211ENST00000525987 KBTBD6Q86V97 674 aa13.33□□□□□ -0.28
SDHD-211ENST00000525987 C12orf40Q86WS4 652 aa13.33□□□□□ -0.28
SDHD-211ENST00000525987 RPLP0P6Q8NHW5 317 aa13.33□□□□□ -0.28
SDHD-211ENST00000525987 CEP295NLQ96MC4 621 aa13.33□□□□□ -0.28
SDHD-211ENST00000525987 HHIPQ96QV1 700 aa13.33□□□□□ -0.28
SDHD-211ENST00000525987 TWNKQ96RR1 684 aa13.33□□□□□ -0.28
SDHD-211ENST00000525987 SMOQ99835 787 aa13.33□□□□□ -0.28
SDHD-211ENST00000525987 APOBEC3GQ9HC16 384 aaKnown RBP13.33□□□□□ -0.28
SDHD-211ENST00000525987 RXFP3Q9NSD7 469 aa13.33□□□□□ -0.28
SDHD-211ENST00000525987 CFAP45Q9UL16 551 aa13.33□□□□□ -0.28
SDHD-211ENST00000525987 USP18Q9UMW8 372 aa13.33□□□□□ -0.28
SDHD-211ENST00000525987 FAM92AA1XBS5 289 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 PCNX2A6NKB5 2137 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 NR3C1P04150 777 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 ZDHHC11BP0C7U3 371 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 DRD1P21728 446 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 CNR2P34972 360 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 SLC6A11P48066 632 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 IFNAR2P48551 515 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 DPYDQ12882 1025 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 KCNB1Q14721 858 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 PPP2R5DQ14738 602 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 CCDC6Q16204 474 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 ZNF699Q32M78 642 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 SV2AQ7L0J3 742 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 GPRIN1Q7Z2K8 1008 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 CEP57L1Q8IYX8 460 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 ADGRG2Q8IZP9 1017 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 CPA6Q8N4T0 437 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 GAB3Q8WWW8 586 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 CD101Q93033 1021 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 ATP2A3Q93084 1043 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 SYAP1Q96A49 352 aaPredicted RBP13.32□□□□□ -0.28
SDHD-211ENST00000525987 P2RY11Q96G91 374 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 ELOVL4Q9GZR5 314 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.32□□□□□ -0.28
SDHD-211ENST00000525987 SEMA4GQ9NTN9 838 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 SMPD4Q9NXE4 827 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 TRPM5Q9NZQ8 1165 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 GMEB2Q9UKD1 530 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 CPQQ9Y646 472 aa13.32□□□□□ -0.28
SDHD-211ENST00000525987 DCDC2BA2VCK2 349 aa13.31□□□□□ -0.28
SDHD-211ENST00000525987 HHLA1C9JL84 531 aa13.31□□□□□ -0.28
SDHD-211ENST00000525987 PDXKO00764 312 aa13.31□□□□□ -0.28
SDHD-211ENST00000525987 DCLK1O15075 740 aa13.31□□□□□ -0.28
SDHD-211ENST00000525987 COCHO43405 550 aa13.31□□□□□ -0.28
SDHD-211ENST00000525987 ASS1P00966 412 aaKnown RBP13.31□□□□□ -0.28
SDHD-211ENST00000525987 RPN1P04843 607 aaKnown RBP13.31□□□□□ -0.28
SDHD-211ENST00000525987 CCDC130P13994 396 aa13.31□□□□□ -0.28
SDHD-211ENST00000525987 PFKLP17858 780 aa13.31□□□□□ -0.28
SDHD-211ENST00000525987 ANXA13P27216 316 aa13.31□□□□□ -0.28
SDHD-211ENST00000525987 MCCD1P59942 119 aaPredicted RBP13.31□□□□□ -0.28
SDHD-211ENST00000525987 PPP3CAQ08209 521 aa13.31□□□□□ -0.28
SDHD-211ENST00000525987 IFRD2Q12894 506 aaPredicted RBP13.31□□□□□ -0.28
SDHD-211ENST00000525987 PSMD2Q13200 908 aa13.31□□□□□ -0.28
SDHD-211ENST00000525987 BIRC3Q13489 604 aa13.31□□□□□ -0.28
SDHD-211ENST00000525987 TRPC3Q13507 836 aa13.31□□□□□ -0.28
SDHD-211ENST00000525987 ZCWPW2Q504Y3 356 aa13.31□□□□□ -0.28
SDHD-211ENST00000525987 SNX30Q5VWJ9 437 aa13.31□□□□□ -0.28
SDHD-211ENST00000525987 RHBDF2Q6PJF5 856 aa13.31□□□□□ -0.28
SDHD-211ENST00000525987 PRR23CQ6ZRP0 262 aa13.31□□□□□ -0.28
SDHD-211ENST00000525987 ACOT1Q86TX2 421 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms