RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 TDRD10Q5VZ19 366 aaKnown RBP11.39□□□□□ -0.59
VPS26B-203ENST00000525918 CCDC33Q8N5R6 958 aa11.39□□□□□ -0.59
VPS26B-203ENST00000525918 SLITRK1Q96PX8 696 aa11.39□□□□□ -0.59
VPS26B-203ENST00000525918 USP28Q96RU2 1077 aa11.39□□□□□ -0.59
VPS26B-203ENST00000525918 PNKPQ96T60 521 aa11.39□□□□□ -0.59
VPS26B-203ENST00000525918 TNMDQ9H2S6 317 aa11.39□□□□□ -0.59
VPS26B-203ENST00000525918 CPQQ9Y646 472 aa11.39□□□□□ -0.59
VPS26B-203ENST00000525918 MYO18AQ92614 2054 aaKnown RBP11.39□□□□□ -0.59
VPS26B-203ENST00000525918 PI4KAP42356 2102 aa11.38□□□□□ -0.59
VPS26B-203ENST00000525918 A0A0A0MRY4 1105 aa11.38□□□□□ -0.59
VPS26B-203ENST00000525918 OAS1P00973 400 aaKnown RBP11.38□□□□□ -0.59
VPS26B-203ENST00000525918 DLATP10515 647 aaKnown RBP11.38□□□□□ -0.59
VPS26B-203ENST00000525918 PTPN1P18031 435 aaKnown RBP11.38□□□□□ -0.59
VPS26B-203ENST00000525918 AMPD3Q01432 767 aa11.38□□□□□ -0.59
VPS26B-203ENST00000525918 TAF10Q12962 218 aa11.38□□□□□ -0.59
VPS26B-203ENST00000525918 DHCR24Q15392 516 aa11.38□□□□□ -0.59
VPS26B-203ENST00000525918 SNRNP35Q16560 246 aaKnown RBP11.38□□□□□ -0.59
VPS26B-203ENST00000525918 WDR72Q3MJ13 1102 aa11.38□□□□□ -0.59
VPS26B-203ENST00000525918 MDH1BQ5I0G3 518 aa11.38□□□□□ -0.59
VPS26B-203ENST00000525918 RHBDF2Q6PJF5 856 aa11.38□□□□□ -0.59
VPS26B-203ENST00000525918 CYP2U1Q7Z449 544 aa11.38□□□□□ -0.59
VPS26B-203ENST00000525918 DDX42Q86XP3 938 aaKnown RBP eCLIP11.38□□□□□ -0.59
VPS26B-203ENST00000525918 RDH13Q8NBN7 331 aa11.38□□□□□ -0.59
VPS26B-203ENST00000525918 GLIS3Q8NEA6 775 aa11.38□□□□□ -0.59
VPS26B-203ENST00000525918 MDGA1Q8NFP4 955 aa11.38□□□□□ -0.59
VPS26B-203ENST00000525918 OR6B3Q8NGW1 331 aa11.38□□□□□ -0.59
VPS26B-203ENST00000525918 ZNF507Q8TCN5 953 aa11.38□□□□□ -0.59
VPS26B-203ENST00000525918 HPS3Q969F9 1004 aa11.38□□□□□ -0.59
VPS26B-203ENST00000525918 FNBP1Q96RU3 617 aa11.38□□□□□ -0.59
VPS26B-203ENST00000525918 MRPL45Q9BRJ2 306 aaKnown RBP11.38□□□□□ -0.59
VPS26B-203ENST00000525918 ELOVL4Q9GZR5 314 aa11.38□□□□□ -0.59
VPS26B-203ENST00000525918 CUEDC2Q9H467 287 aa11.38□□□□□ -0.59
VPS26B-203ENST00000525918 ZSCAN16Q9H4T2 348 aaPredicted RBP11.38□□□□□ -0.59
VPS26B-203ENST00000525918 POLMQ9NP87 494 aaPredicted RBP11.38□□□□□ -0.59
VPS26B-203ENST00000525918 TMEM9BQ9NQ34 198 aa11.38□□□□□ -0.59
VPS26B-203ENST00000525918 KBTBD4Q9NVX7 518 aa11.38□□□□□ -0.59
VPS26B-203ENST00000525918 TBC1D14Q9P2M4 693 aa11.38□□□□□ -0.59
VPS26B-203ENST00000525918 CFAP47Q6ZTR5 3102 aa11.38□□□□□ -0.59
VPS26B-203ENST00000525918 ANTXRLA6NF34 631 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 CDX4O14627 284 aaPredicted RBP11.37□□□□□ -0.59
VPS26B-203ENST00000525918 TGFB1I1O43294 461 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 RTN3O95197 1032 aaPredicted RBP11.37□□□□□ -0.59
VPS26B-203ENST00000525918 KAT7O95251 611 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 ADH1CP00326 375 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 APODP05090 189 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 CEACAM1P13688 526 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 CSRP1P21291 193 aaKnown RBP11.37□□□□□ -0.59
VPS26B-203ENST00000525918 BCKDHBP21953 392 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 TNFRSF4P43489 277 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 SLC6A11P48066 632 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 DHPSP49366 369 aaPredicted RBP11.37□□□□□ -0.59
VPS26B-203ENST00000525918 SNRPFP62306 86 aaKnown RBP11.37□□□□□ -0.59
VPS26B-203ENST00000525918 TNNC1P63316 161 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 PSMD6Q15008 389 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 SH3PXD2AQ5TCZ1 1133 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 TMEM92Q6UXU6 159 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 EPM2AIP1Q7L775 607 aaPredicted RBP11.37□□□□□ -0.59
VPS26B-203ENST00000525918 TTC30AQ86WT1 665 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 NUP93Q8N1F7 819 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 ALLCQ8N6M5 410 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 IL17RCQ8NAC3 791 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 TXNDC5Q8NBS9 432 aaKnown RBP11.37□□□□□ -0.59
VPS26B-203ENST00000525918 PDZD8Q8NEN9 1154 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 OLIG1Q8TAK6 271 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 OVCA2Q8WZ82 227 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 OTUB2Q96DC9 234 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 CGRRF1Q99675 332 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 TRIM9Q9C026 710 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 AGPAT3Q9NRZ7 376 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 SMPD4Q9NXE4 827 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 CFAP97Q9P2B7 532 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 NME7Q9Y5B8 376 aa11.37□□□□□ -0.59
VPS26B-203ENST00000525918 E2F8A0AVK6 867 aa11.36□□□□□ -0.59
VPS26B-203ENST00000525918 A8MXQ7 604 aa11.36□□□□□ -0.59
VPS26B-203ENST00000525918 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.36□□□□□ -0.59
VPS26B-203ENST00000525918 PATE3B3GLJ2 98 aa11.36□□□□□ -0.59
VPS26B-203ENST00000525918 GIPC1O14908 333 aa11.36□□□□□ -0.59
VPS26B-203ENST00000525918 MAP3K13O43283 966 aa11.36□□□□□ -0.59
VPS26B-203ENST00000525918 KLF8O95600 359 aaPredicted RBP11.36□□□□□ -0.59
VPS26B-203ENST00000525918 STAU1O95793 577 aaKnown RBP11.36□□□□□ -0.59
VPS26B-203ENST00000525918 PROS1P07225 676 aa11.36□□□□□ -0.59
VPS26B-203ENST00000525918 MBL2P11226 248 aaPredicted RBP11.36□□□□□ -0.59
VPS26B-203ENST00000525918 ADH5P11766 374 aa11.36□□□□□ -0.59
VPS26B-203ENST00000525918 YWHAQP27348 245 aa11.36□□□□□ -0.59
VPS26B-203ENST00000525918 ATICP31939 592 aa11.36□□□□□ -0.59
VPS26B-203ENST00000525918 TIE1P35590 1138 aa11.36□□□□□ -0.59
VPS26B-203ENST00000525918 P2RY2P41231 377 aa11.36□□□□□ -0.59
VPS26B-203ENST00000525918 GRIA2P42262 883 aa11.36□□□□□ -0.59
VPS26B-203ENST00000525918 NASPP49321 788 aaPredicted RBP11.36□□□□□ -0.59
VPS26B-203ENST00000525918 CACNA2D1P54289 1103 aa11.36□□□□□ -0.59
VPS26B-203ENST00000525918 ASIC1P78348 528 aa11.36□□□□□ -0.59
VPS26B-203ENST00000525918 IRX4P78413 519 aa11.36□□□□□ -0.59
VPS26B-203ENST00000525918 CYP24A1Q07973 514 aa11.36□□□□□ -0.59
VPS26B-203ENST00000525918 IFRD2Q12894 506 aaPredicted RBP11.36□□□□□ -0.59
VPS26B-203ENST00000525918 TRPC3Q13507 836 aa11.36□□□□□ -0.59
VPS26B-203ENST00000525918 BYSLQ13895 437 aaKnown RBP11.36□□□□□ -0.59
VPS26B-203ENST00000525918 STK38Q15208 465 aa11.36□□□□□ -0.59
VPS26B-203ENST00000525918 E2F4Q16254 413 aa11.36□□□□□ -0.59
VPS26B-203ENST00000525918 PREPLQ4J6C6 727 aaPredicted RBP11.36□□□□□ -0.59
VPS26B-203ENST00000525918 SPDYCQ5MJ68 293 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms