RNA–Protein interactions for RNA: ENST00000525669.5

PABPC4-220, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-220ENST00000525669 ARFGAP1Q8N6T3 406 aa9.19□□□□□ -0.94
PABPC4-220ENST00000525669 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.19□□□□□ -0.94
PABPC4-220ENST00000525669 SPATA18Q8TC71 538 aa9.19□□□□□ -0.94
PABPC4-220ENST00000525669 STK32AQ8WU08 396 aa9.19□□□□□ -0.94
PABPC4-220ENST00000525669 RXFP2Q8WXD0 754 aa9.19□□□□□ -0.94
PABPC4-220ENST00000525669 UBXN4Q92575 508 aa9.19□□□□□ -0.94
PABPC4-220ENST00000525669 KHSRPQ92945 711 aaKnown RBP eCLIP9.19□□□□□ -0.94
PABPC4-220ENST00000525669 ZNF689Q96CS4 500 aaPredicted RBP9.19□□□□□ -0.94
PABPC4-220ENST00000525669 SMARCD1Q96GM5 515 aa9.19□□□□□ -0.94
PABPC4-220ENST00000525669 CFAP57Q96MR6 1250 aa9.19□□□□□ -0.94
PABPC4-220ENST00000525669 PGLYRP2Q96PD5 576 aa9.19□□□□□ -0.94
PABPC4-220ENST00000525669 HINFPQ9BQA5 517 aa9.19□□□□□ -0.94
PABPC4-220ENST00000525669 VN1R3Q9BXE9 311 aa9.19□□□□□ -0.94
PABPC4-220ENST00000525669 ZCWPW1Q9H0M4 648 aa9.19□□□□□ -0.94
PABPC4-220ENST00000525669 PRKAG2Q9UGJ0 569 aa9.19□□□□□ -0.94
PABPC4-220ENST00000525669 TMEM59LQ9UK28 342 aa9.19□□□□□ -0.94
PABPC4-220ENST00000525669 MRPL42Q9Y6G3 142 aaKnown RBP9.19□□□□□ -0.94
PABPC4-220ENST00000525669 PLXNA3P51805 1871 aa9.19□□□□□ -0.94
PABPC4-220ENST00000525669 GREB1Q4ZG55 1949 aa9.19□□□□□ -0.94
PABPC4-220ENST00000525669 TCRBV7S2A1N4TA0A589 114 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 ARHGEF37A1IGU5 675 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 C2CD4BA6NLJ0 364 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 PGRMC1O00264 195 aaKnown RBP9.18□□□□□ -0.94
PABPC4-220ENST00000525669 CES2O00748 559 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 SF3B1O75533 1304 aaKnown RBP eCLIP9.18□□□□□ -0.942e-9■■■■■ 42.7
PABPC4-220ENST00000525669 SOAT2O75908 522 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 OAZ2O95190 189 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 FGBP02675 491 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 FGGP02679 453 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 KRT1P04264 644 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 PDGFRAP16234 1089 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 FGFR3P22607 806 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 CYP2F1P24903 491 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 MAN1A1P33908 653 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 ACADSBP45954 432 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 RPL34P49207 117 aaKnown RBP9.18□□□□□ -0.94
PABPC4-220ENST00000525669 ALDH7A1P49419 539 aaKnown RBP9.18□□□□□ -0.94
PABPC4-220ENST00000525669 GPR15P49685 360 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 RWDD2BP57060 319 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 SLC8A3P57103 927 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 FPGSQ05932 587 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 ADCY1Q08828 1119 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 BTG3Q14201 252 aaPredicted RBP9.18□□□□□ -0.94
PABPC4-220ENST00000525669 PIGHQ14442 188 aaPredicted RBP9.18□□□□□ -0.94
PABPC4-220ENST00000525669 CCDC14Q49A88 953 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 ZFYVE27Q5T4F4 411 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 SEL1L2Q5TEA6 688 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 SDHAF4Q5VUM1 108 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 RSPO2Q6UXX9 243 aaPredicted RBP9.18□□□□□ -0.94
PABPC4-220ENST00000525669 HFE2Q6ZVN8 426 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 ZNF572Q7Z3I7 529 aaPredicted RBP9.18□□□□□ -0.94
PABPC4-220ENST00000525669 ANKS1BQ7Z6G8 1248 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 CCDC50Q8IVM0 306 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 SCN4BQ8IWT1 228 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 RHOT1Q8IXI2 618 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 KLHL7Q8IXQ5 586 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 SIX6OS1Q8N1H7 587 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 TTC9BQ8N6N2 239 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 SPATA4Q8NEY3 305 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 ACTRT1Q8TDG2 376 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 RNF25Q96BH1 459 aaPredicted RBP9.18□□□□□ -0.94
PABPC4-220ENST00000525669 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.18□□□□□ -0.944e-18■■■■■ 54
PABPC4-220ENST00000525669 HERPUD2Q9BSE4 406 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 ULBP1Q9BZM6 244 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 LRRC4Q9HBW1 653 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 ABI2Q9NYB9 513 aaPredicted RBP9.18□□□□□ -0.94
PABPC4-220ENST00000525669 PCSK1NQ9UHG2 260 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 ZMYND8Q9ULU4 1186 aaPredicted RBP9.18□□□□□ -0.94
PABPC4-220ENST00000525669 NR2E1Q9Y466 385 aa9.18□□□□□ -0.94
PABPC4-220ENST00000525669 KRIT1O00522 736 aa9.17□□□□□ -0.94
PABPC4-220ENST00000525669 C2CD2LO14523 706 aa9.17□□□□□ -0.94
PABPC4-220ENST00000525669 SYN3O14994 580 aa9.17□□□□□ -0.94
PABPC4-220ENST00000525669 ADAM12O43184 909 aa9.17□□□□□ -0.94
PABPC4-220ENST00000525669 PSTPIP1O43586 416 aa9.17□□□□□ -0.94
PABPC4-220ENST00000525669 LRCH4O75427 683 aa9.17□□□□□ -0.94
PABPC4-220ENST00000525669 USP17L7P0C7H9 530 aa9.17□□□□□ -0.94
PABPC4-220ENST00000525669 CPB1P15086 417 aa9.17□□□□□ -0.94
PABPC4-220ENST00000525669 RPL17P18621 184 aaKnown RBP9.17□□□□□ -0.94
PABPC4-220ENST00000525669 IL1R2P27930 398 aa9.17□□□□□ -0.94
PABPC4-220ENST00000525669 GRIK1P39086 918 aa9.17□□□□□ -0.94
PABPC4-220ENST00000525669 ZNF143P52747 638 aaPredicted RBP9.17□□□□□ -0.94
PABPC4-220ENST00000525669 ATXN1P54253 815 aaKnown RBP9.17□□□□□ -0.94
PABPC4-220ENST00000525669 SNX16P57768 344 aa9.17□□□□□ -0.94
PABPC4-220ENST00000525669 MRPS5P82675 430 aaKnown RBP9.17□□□□□ -0.94
PABPC4-220ENST00000525669 PPIGQ13427 754 aaKnown RBP eCLIP9.17□□□□□ -0.943e-7■■□□□ 13.4
PABPC4-220ENST00000525669 MRPL58Q14197 206 aaKnown RBP9.17□□□□□ -0.94
PABPC4-220ENST00000525669 SMTNL2Q2TAL5 461 aa9.17□□□□□ -0.94
PABPC4-220ENST00000525669 KCNT1Q5JUK3 1230 aa9.17□□□□□ -0.94
PABPC4-220ENST00000525669 ZNF280DQ6N043 979 aa9.17□□□□□ -0.94
PABPC4-220ENST00000525669 SCYL2Q6P3W7 929 aa9.17□□□□□ -0.94
PABPC4-220ENST00000525669 KCNT2Q6UVM3 1135 aa9.17□□□□□ -0.94
PABPC4-220ENST00000525669 RNF19BQ6ZMZ0 732 aa9.17□□□□□ -0.94
PABPC4-220ENST00000525669 FAM43BQ6ZT52 329 aaPredicted RBP9.17□□□□□ -0.94
PABPC4-220ENST00000525669 DCP1BQ8IZD4 617 aaKnown RBP9.17□□□□□ -0.94
PABPC4-220ENST00000525669 DEFB106AQ8N104 65 aa9.17□□□□□ -0.94
PABPC4-220ENST00000525669 NIPA2Q8N8Q9 360 aa9.17□□□□□ -0.94
PABPC4-220ENST00000525669 COLGALT1Q8NBJ5 622 aa9.17□□□□□ -0.94
PABPC4-220ENST00000525669 GPR152Q8TDT2 470 aa9.17□□□□□ -0.94
PABPC4-220ENST00000525669 KCTD13Q8WZ19 329 aa9.17□□□□□ -0.94
PABPC4-220ENST00000525669 HSPH1Q92598 858 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms