RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 RBM12Q9NTZ6 932 aaKnown RBP14.13□□□□□ -0.15
LRRK1-202ENST00000525284 PAK5Q9P286 719 aa14.13□□□□□ -0.15
LRRK1-202ENST00000525284 SF3B1O75533 1304 aaKnown RBP eCLIP14.13□□□□□ -0.15
LRRK1-202ENST00000525284 HS6ST1O60243 411 aa14.13□□□□□ -0.15
LRRK1-202ENST00000525284 KPNA6O60684 536 aa14.13□□□□□ -0.15
LRRK1-202ENST00000525284 CEBPGP53567 150 aa14.13□□□□□ -0.15
LRRK1-202ENST00000525284 R3HCC1LQ7Z5L2 792 aaKnown RBP14.13□□□□□ -0.15
LRRK1-202ENST00000525284 VPS33AQ96AX1 596 aa14.13□□□□□ -0.15
LRRK1-202ENST00000525284 ROPN1BQ9BZX4 212 aaPredicted RBP14.13□□□□□ -0.15
LRRK1-202ENST00000525284 ROPN1Q9HAT0 212 aaPredicted RBP14.13□□□□□ -0.15
LRRK1-202ENST00000525284 TRPM5Q9NZQ8 1165 aa14.13□□□□□ -0.15
LRRK1-202ENST00000525284 PSMD11O00231 422 aa14.13□□□□□ -0.15
LRRK1-202ENST00000525284 MAPK1P28482 360 aa14.13□□□□□ -0.15
LRRK1-202ENST00000525284 GLRBP48167 497 aa14.13□□□□□ -0.15
LRRK1-202ENST00000525284 SMTNL2Q2TAL5 461 aa14.13□□□□□ -0.15
LRRK1-202ENST00000525284 GIMAP8Q8ND71 665 aaPredicted RBP14.13□□□□□ -0.15
LRRK1-202ENST00000525284 CCDC115Q96NT0 180 aa14.13□□□□□ -0.15
LRRK1-202ENST00000525284 DGCR6LQ9BY27 220 aa14.13□□□□□ -0.15
LRRK1-202ENST00000525284 IRX2Q9BZI1 471 aaPredicted RBP14.13□□□□□ -0.15
LRRK1-202ENST00000525284 VPS33BQ9H267 617 aa14.13□□□□□ -0.15
LRRK1-202ENST00000525284 PI4KBQ9UBF8 816 aa14.13□□□□□ -0.15
LRRK1-202ENST00000525284 SLC9A8Q9Y2E8 581 aa14.13□□□□□ -0.15
LRRK1-202ENST00000525284 ASNSP08243 561 aa14.13□□□□□ -0.15
LRRK1-202ENST00000525284 STK4Q13043 487 aa14.13□□□□□ -0.15
LRRK1-202ENST00000525284 WDR72Q3MJ13 1102 aa14.13□□□□□ -0.15
LRRK1-202ENST00000525284 TCEAL5Q5H9L2 206 aa14.13□□□□□ -0.15
LRRK1-202ENST00000525284 UGT3A1Q6NUS8 523 aa14.13□□□□□ -0.15
LRRK1-202ENST00000525284 PPCSQ9HAB8 311 aa14.13□□□□□ -0.15
LRRK1-202ENST00000525284 FAM49BQ9NUQ9 324 aa14.13□□□□□ -0.15
LRRK1-202ENST00000525284 COMMD8Q9NX08 183 aa14.13□□□□□ -0.15
LRRK1-202ENST00000525284 KLHL41O60662 606 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 OR6A2O95222 327 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 CCDC166P0CW27 439 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 PAX7P23759 505 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 AGAP9Q5VTM2 703 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 JAMLQ86YT9 394 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 GOLPH3Q9H4A6 298 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 COPRSQ9NQ92 184 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 CCDC182A6NF36 153 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 PIK3CDO00329 1044 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 LSM1O15116 133 aaKnown RBP14.12□□□□□ -0.15
LRRK1-202ENST00000525284 PDHA2P29803 388 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 PTGER2P43116 358 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 CAMK1Q14012 370 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 TIGD7Q6NT04 549 aaPredicted RBP14.12□□□□□ -0.15
LRRK1-202ENST00000525284 RNF19BQ6ZMZ0 732 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 FAM71DQ8N9W8 422 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 KAT2BQ92831 832 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 MOV10L1Q9BXT6 1211 aaKnown RBP14.12□□□□□ -0.15
LRRK1-202ENST00000525284 LRRC14BA6NHZ5 514 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 USP17L15C9J2P7 530 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 USP17L13C9JLJ4 530 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 USP17L11C9JVI0 530 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 USP17L18D6R9N7 530 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 USP17L22D6RA61 530 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 USP17L17D6RBQ6 530 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 USP17L19D6RCP7 530 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 USP17L20D6RJB6 530 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 AP3D1O14617 1153 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 SPAG6O75602 509 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 ENO2P09104 434 aaPredicted RBP14.12□□□□□ -0.15
LRRK1-202ENST00000525284 USP17L24Q0WX57 530 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 USP17L6PQ6QN14 398 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 CAMKK1Q8N5S9 505 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 NUAK2Q9H093 628 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 PTPRHQ9HD43 1115 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 LMTK3Q96Q04 1460 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 LOC100506127A0A0U1RQW1 187 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 CHURC1-FNTBB4DL54 471 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 PDGFRBP09619 1106 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 MYBP10242 640 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 SCTRP47872 440 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 CDK8P49336 464 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 RASSF6Q6ZTQ3 369 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 RTN3O95197 1032 aaPredicted RBP14.12□□□□□ -0.15
LRRK1-202ENST00000525284 VAV1P15498 845 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 SLC29A2Q14542 456 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 SLC7A14Q8TBB6 771 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 OSBPL5Q9H0X9 879 aaPredicted RBP14.12□□□□□ -0.15
LRRK1-202ENST00000525284 TMEM260Q9NX78 707 aa14.12□□□□□ -0.15
LRRK1-202ENST00000525284 HLA-DQA2P01906 255 aa14.11□□□□□ -0.15
LRRK1-202ENST00000525284 UMPSP11172 480 aa14.11□□□□□ -0.15
LRRK1-202ENST00000525284 IREB2P48200 963 aaKnown RBP14.11□□□□□ -0.15
LRRK1-202ENST00000525284 TRAP1Q12931 704 aaKnown RBP14.11□□□□□ -0.15
LRRK1-202ENST00000525284 FGD3Q5JSP0 725 aa14.11□□□□□ -0.15
LRRK1-202ENST00000525284 ZCCHC8Q6NZY4 707 aaKnown RBP14.11□□□□□ -0.15
LRRK1-202ENST00000525284 RIPOR1Q6ZS17 1223 aa14.11□□□□□ -0.15
LRRK1-202ENST00000525284 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.11□□□□□ -0.15
LRRK1-202ENST00000525284 PACS2Q86VP3 889 aa14.11□□□□□ -0.15
LRRK1-202ENST00000525284 SEPT5Q99719 369 aaPredicted RBP14.11□□□□□ -0.15
LRRK1-202ENST00000525284 RSPH9Q9H1X1 276 aaPredicted RBP14.11□□□□□ -0.15
LRRK1-202ENST00000525284 DCLRE1BQ9H816 532 aa14.11□□□□□ -0.15
LRRK1-202ENST00000525284 ERBB3P21860 1342 aa14.11□□□□□ -0.15
LRRK1-202ENST00000525284 BCLAF3A2AJT9 711 aaKnown RBP14.11□□□□□ -0.15
LRRK1-202ENST00000525284 FCGR1AP12314 374 aa14.11□□□□□ -0.15
LRRK1-202ENST00000525284 ALDH9A1P49189 494 aa14.11□□□□□ -0.15
LRRK1-202ENST00000525284 SH3GLB2Q9NR46 395 aa14.11□□□□□ -0.15
LRRK1-202ENST00000525284 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.11□□□□□ -0.15
LRRK1-202ENST00000525284 KHDRBS3O75525 346 aaKnown RBP14.11□□□□□ -0.15
LRRK1-202ENST00000525284 FASP25445 335 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms