RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 OR6B3Q8NGW1 331 aa25.53■■□□□ 1.68
USP47-205ENST00000525257 C8orf48Q96LL4 319 aa25.53■■□□□ 1.68
USP47-205ENST00000525257 KIAA1586Q9HCI6 787 aa25.53■■□□□ 1.68
USP47-205ENST00000525257 CFAP97Q9P2B7 532 aa25.53■■□□□ 1.68
USP47-205ENST00000525257 OLFM2O95897 454 aa25.52■■□□□ 1.68
USP47-205ENST00000525257 CST3P01034 146 aaPredicted RBP25.52■■□□□ 1.68
USP47-205ENST00000525257 HNRNPLP14866 589 aaKnown RBP eCLIP25.52■■□□□ 1.684e-6■□□□□ 11
USP47-205ENST00000525257 TNNI1P19237 187 aa25.52■■□□□ 1.68
USP47-205ENST00000525257 PPP3CCP48454 512 aa25.52■■□□□ 1.68
USP47-205ENST00000525257 MRPS21P82921 87 aaKnown RBP25.52■■□□□ 1.68
USP47-205ENST00000525257 TAF10Q12962 218 aa25.52■■□□□ 1.68
USP47-205ENST00000525257 SNRNP35Q16560 246 aaKnown RBP25.52■■□□□ 1.68
USP47-205ENST00000525257 TDRD10Q5VZ19 366 aaKnown RBP25.52■■□□□ 1.68
USP47-205ENST00000525257 TNMDQ9H2S6 317 aa25.52■■□□□ 1.68
USP47-205ENST00000525257 DPEP3Q9H4B8 488 aa25.52■■□□□ 1.68
USP47-205ENST00000525257 TMEM9BQ9NQ34 198 aa25.52■■□□□ 1.68
USP47-205ENST00000525257 TMEM30AQ9NV96 361 aa25.52■■□□□ 1.68
USP47-205ENST00000525257 CIZ1Q9ULV3 898 aaPredicted RBP25.52■■□□□ 1.68
USP47-205ENST00000525257 MORC2Q9Y6X9 1032 aaPredicted RBP25.52■■□□□ 1.68
USP47-205ENST00000525257 MYOFQ9NZM1 2061 aa25.51■■□□□ 1.67
USP47-205ENST00000525257 SLC9A3R1O14745 358 aaPredicted RBP25.51■■□□□ 1.67
USP47-205ENST00000525257 TACC1O75410 805 aa25.51■■□□□ 1.67
USP47-205ENST00000525257 KLF8O95600 359 aaPredicted RBP25.51■■□□□ 1.67
USP47-205ENST00000525257 OAS1P00973 400 aaKnown RBP25.51■■□□□ 1.67
USP47-205ENST00000525257 PTPN1P18031 435 aaKnown RBP25.51■■□□□ 1.67
USP47-205ENST00000525257 TIE1P35590 1138 aa25.51■■□□□ 1.67
USP47-205ENST00000525257 TNNC1P63316 161 aa25.51■■□□□ 1.67
USP47-205ENST00000525257 ZNF252P-AS1Q0IIN9 211 aa25.51■■□□□ 1.67
USP47-205ENST00000525257 C12orf40Q86WS4 652 aa25.51■■□□□ 1.67
USP47-205ENST00000525257 TXNDC5Q8NBS9 432 aaKnown RBP25.51■■□□□ 1.67
USP47-205ENST00000525257 SLITRK1Q96PX8 696 aa25.51■■□□□ 1.67
USP47-205ENST00000525257 PNKPQ96T60 521 aa25.51■■□□□ 1.67
USP47-205ENST00000525257 ZNF518BQ9C0D4 1074 aa25.51■■□□□ 1.67
USP47-205ENST00000525257 ALDH1A2O94788 518 aa25.5■■□□□ 1.67
USP47-205ENST00000525257 MBL2P11226 248 aaPredicted RBP25.5■■□□□ 1.67
USP47-205ENST00000525257 CYP2J2P51589 502 aa25.5■■□□□ 1.67
USP47-205ENST00000525257 KDSRQ06136 332 aa25.5■■□□□ 1.67
USP47-205ENST00000525257 WDR72Q3MJ13 1102 aa25.5■■□□□ 1.67
USP47-205ENST00000525257 SH3PXD2AQ5TCZ1 1133 aa25.5■■□□□ 1.67
USP47-205ENST00000525257 RHBDF2Q6PJF5 856 aa25.5■■□□□ 1.67
USP47-205ENST00000525257 KIAA1958Q8N8K9 716 aa25.5■■□□□ 1.67
USP47-205ENST00000525257 IL17RCQ8NAC3 791 aa25.5■■□□□ 1.67
USP47-205ENST00000525257 RLN3Q8WXF3 142 aa25.5■■□□□ 1.67
USP47-205ENST00000525257 PIGKQ92643 395 aa25.5■■□□□ 1.67
USP47-205ENST00000525257 CCDC127Q96BQ5 260 aa25.5■■□□□ 1.67
USP47-205ENST00000525257 FNBP1Q96RU3 617 aa25.5■■□□□ 1.67
USP47-205ENST00000525257 CGRRF1Q99675 332 aa25.5■■□□□ 1.67
USP47-205ENST00000525257 TRIM9Q9C026 710 aa25.5■■□□□ 1.67
USP47-205ENST00000525257 ELOVL4Q9GZR5 314 aa25.5■■□□□ 1.67
USP47-205ENST00000525257 ZDHHC4Q9NPG8 344 aa25.5■■□□□ 1.67
USP47-205ENST00000525257 AGPAT3Q9NRZ7 376 aa25.5■■□□□ 1.67
USP47-205ENST00000525257 SGK1O00141 431 aa25.49■■□□□ 1.67
USP47-205ENST00000525257 CLDN5O00501 218 aa25.49■■□□□ 1.67
USP47-205ENST00000525257 CLIC2O15247 247 aa25.49■■□□□ 1.67
USP47-205ENST00000525257 EIF3DO15371 548 aaKnown RBP eCLIP25.49■■□□□ 1.67
USP47-205ENST00000525257 KAT7O95251 611 aa25.49■■□□□ 1.67
USP47-205ENST00000525257 ADH1CP00326 375 aa25.49■■□□□ 1.67
USP47-205ENST00000525257 APODP05090 189 aa25.49■■□□□ 1.67
USP47-205ENST00000525257 ASIC1P78348 528 aa25.49■■□□□ 1.67
USP47-205ENST00000525257 FOXC1Q12948 553 aa25.49■■□□□ 1.67
USP47-205ENST00000525257 STK38Q15208 465 aa25.49■■□□□ 1.67
USP47-205ENST00000525257 EMC10Q5UCC4 262 aa25.49■■□□□ 1.67
USP47-205ENST00000525257 OLIG1Q8TAK6 271 aa25.49■■□□□ 1.67
USP47-205ENST00000525257 LRRC27Q9C0I9 530 aa25.49■■□□□ 1.67
USP47-205ENST00000525257 ARHGEF4Q9NR80 690 aa25.49■■□□□ 1.67
USP47-205ENST00000525257 KBTBD4Q9NVX7 518 aa25.49■■□□□ 1.67
USP47-205ENST00000525257 MTMR6Q9Y217 621 aa25.49■■□□□ 1.67
USP47-205ENST00000525257 A8MXQ7 604 aa25.48■■□□□ 1.67
USP47-205ENST00000525257 CDX4O14627 284 aaPredicted RBP25.48■■□□□ 1.67
USP47-205ENST00000525257 TGFB1I1O43294 461 aa25.48■■□□□ 1.67
USP47-205ENST00000525257 CHRM1P11229 460 aaPredicted RBP25.48■■□□□ 1.67
USP47-205ENST00000525257 ADH5P11766 374 aa25.48■■□□□ 1.67
USP47-205ENST00000525257 IRX4P78413 519 aa25.48■■□□□ 1.67
USP47-205ENST00000525257 CYP24A1Q07973 514 aa25.48■■□□□ 1.67
USP47-205ENST00000525257 PSMD6Q15008 389 aa25.48■■□□□ 1.67
USP47-205ENST00000525257 E2F4Q16254 413 aa25.48■■□□□ 1.67
USP47-205ENST00000525257 ARMCX6Q7L4S7 300 aa25.48■■□□□ 1.67
USP47-205ENST00000525257 EPM2AIP1Q7L775 607 aaPredicted RBP25.48■■□□□ 1.67
USP47-205ENST00000525257 DDX42Q86XP3 938 aaKnown RBP eCLIP25.48■■□□□ 1.67
USP47-205ENST00000525257 ZNF507Q8TCN5 953 aa25.48■■□□□ 1.67
USP47-205ENST00000525257 B3GNT5Q9BYG0 378 aa25.48■■□□□ 1.67
USP47-205ENST00000525257 BCCIPQ9P287 314 aaKnown RBP eCLIP25.48■■□□□ 1.67
USP47-205ENST00000525257 PROS1P07225 676 aa25.47■■□□□ 1.67
USP47-205ENST00000525257 YWHAQP27348 245 aa25.47■■□□□ 1.67
USP47-205ENST00000525257 EIF2DP41214 584 aaKnown RBP25.47■■□□□ 1.67
USP47-205ENST00000525257 P2RY2P41231 377 aa25.47■■□□□ 1.67
USP47-205ENST00000525257 NASPP49321 788 aaPredicted RBP25.47■■□□□ 1.67
USP47-205ENST00000525257 UAP1L1Q3KQV9 507 aa25.47■■□□□ 1.67
USP47-205ENST00000525257 FAM26FQ5R3K3 315 aa25.47■■□□□ 1.67
USP47-205ENST00000525257 NELFCDQ8IXH7 590 aa25.47■■□□□ 1.67
USP47-205ENST00000525257 FRMD1Q8N878 549 aa25.47■■□□□ 1.67
USP47-205ENST00000525257 B3GALNT2Q8NCR0 500 aa25.47■■□□□ 1.67
USP47-205ENST00000525257 WHAMMQ8TF30 809 aa25.47■■□□□ 1.67
USP47-205ENST00000525257 FBXO32Q969P5 355 aa25.47■■□□□ 1.67
USP47-205ENST00000525257 DHX58Q96C10 678 aa25.47■■□□□ 1.67
USP47-205ENST00000525257 SPACA7Q96KW9 195 aa25.47■■□□□ 1.67
USP47-205ENST00000525257 POLMQ9NP87 494 aaPredicted RBP25.47■■□□□ 1.67
USP47-205ENST00000525257 FOXD4L1Q9NU39 408 aa25.47■■□□□ 1.67
USP47-205ENST00000525257 NXF1Q9UBU9 619 aaKnown RBP25.47■■□□□ 1.67
USP47-205ENST00000525257 ASPMQ8IZT6 3477 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms