RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 SH2B3Q9UQQ2 575 aa5.25□□□□□ -1.57
CD44-215ENST00000525241 AQP7P3A6NL99 342 aa5.24□□□□□ -1.57
CD44-215ENST00000525241 PIAS2O75928 621 aa5.24□□□□□ -1.57
CD44-215ENST00000525241 FGF18O76093 207 aa5.24□□□□□ -1.57
CD44-215ENST00000525241 VNN1O95497 513 aa5.24□□□□□ -1.57
CD44-215ENST00000525241 ONECUT2O95948 504 aa5.24□□□□□ -1.57
CD44-215ENST00000525241 UQCRC1P31930 480 aa5.24□□□□□ -1.57
CD44-215ENST00000525241 PMS2P11Q13670 270 aa5.24□□□□□ -1.57
CD44-215ENST00000525241 KCNAB1Q14722 419 aa5.24□□□□□ -1.57
CD44-215ENST00000525241 ZNF362Q5T0B9 420 aaPredicted RBP5.24□□□□□ -1.57
CD44-215ENST00000525241 CATSPERGQ6ZRH7 1159 aa5.24□□□□□ -1.57
CD44-215ENST00000525241 ZNF551Q7Z340 670 aaPredicted RBP5.24□□□□□ -1.57
CD44-215ENST00000525241 KRT28Q7Z3Y7 464 aa5.24□□□□□ -1.57
CD44-215ENST00000525241 SRLQ86TD4 932 aa5.24□□□□□ -1.57
CD44-215ENST00000525241 BRI3BPQ8WY22 251 aa5.24□□□□□ -1.57
CD44-215ENST00000525241 GJA10Q969M2 543 aa5.24□□□□□ -1.57
CD44-215ENST00000525241 R3HDM4Q96D70 268 aa5.24□□□□□ -1.57
CD44-215ENST00000525241 TNIP3Q96KP6 325 aa5.24□□□□□ -1.57
CD44-215ENST00000525241 SGCZQ96LD1 299 aa5.24□□□□□ -1.57
CD44-215ENST00000525241 ELAC2Q9BQ52 826 aaKnown RBP5.24□□□□□ -1.57
CD44-215ENST00000525241 KIAA0355O15063 1070 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 ORC4O43929 436 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 TTLL1O95922 423 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 IFIT2P09913 472 aaKnown RBP5.23□□□□□ -1.57
CD44-215ENST00000525241 HARSP12081 509 aaKnown RBP5.23□□□□□ -1.57
CD44-215ENST00000525241 HGFP14210 728 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 PRKAR1BP31321 381 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 ALDH9A1P49189 494 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 CACNA2D1P54289 1103 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 TIAL1Q01085 375 aaKnown RBP eCLIP5.23□□□□□ -1.57
CD44-215ENST00000525241 HDAC1Q13547 482 aaPredicted RBP5.23□□□□□ -1.57
CD44-215ENST00000525241 ERCC6LQ2NKX8 1250 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 KRTAP15-1Q3LI76 137 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 ARL13BQ3SXY8 428 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 PLAC9Q5JTB6 97 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 MANEALQ5VSG8 457 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 IZUMO3Q5VZ72 239 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 BEND5Q7L4P6 421 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 FAM186BQ8IYM0 893 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 CAGE1Q8TC20 777 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 SMCR8Q8TEV9 937 aaPredicted RBP5.23□□□□□ -1.57
CD44-215ENST00000525241 ZBTB45Q96K62 511 aaPredicted RBP5.23□□□□□ -1.57
CD44-215ENST00000525241 GDF15Q99988 308 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 DUSP26Q9BV47 211 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 KRTAP4-2Q9BYR5 136 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 PRDM13Q9H4Q3 707 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 DLL3Q9NYJ7 618 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 TLK1Q9UKI8 766 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 GABRQQ9UN88 632 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 ST3GAL5Q9UNP4 418 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 ENTPD2Q9Y5L3 495 aa5.23□□□□□ -1.57
CD44-215ENST00000525241 AGPSO00116 658 aa5.22□□□□□ -1.57
CD44-215ENST00000525241 KCNQ3O43525 872 aa5.22□□□□□ -1.57
CD44-215ENST00000525241 ITPKBP27987 946 aa5.22□□□□□ -1.57
CD44-215ENST00000525241 EPHA3P29320 983 aa5.22□□□□□ -1.57
CD44-215ENST00000525241 SERPINB3P29508 390 aa5.22□□□□□ -1.57
CD44-215ENST00000525241 STK3Q13188 491 aa5.22□□□□□ -1.57
CD44-215ENST00000525241 CAND1Q86VP6 1230 aaKnown RBP5.22□□□□□ -1.57
CD44-215ENST00000525241 DEPTORQ8TB45 409 aa5.22□□□□□ -1.57
CD44-215ENST00000525241 XAGE5Q8WWM1 108 aa5.22□□□□□ -1.57
CD44-215ENST00000525241 RSPRY1Q96DX4 576 aa5.22□□□□□ -1.57
CD44-215ENST00000525241 LRRC46Q96FV0 321 aa5.22□□□□□ -1.57
CD44-215ENST00000525241 TIMP4Q99727 224 aa5.22□□□□□ -1.57
CD44-215ENST00000525241 NLRC4Q9NPP4 1024 aa5.22□□□□□ -1.57
CD44-215ENST00000525241 HEYLQ9NQ87 328 aaPredicted RBP5.22□□□□□ -1.57
CD44-215ENST00000525241 IL17RBQ9NRM6 502 aa5.22□□□□□ -1.57
CD44-215ENST00000525241 SLC17A6Q9P2U8 582 aa5.22□□□□□ -1.57
CD44-215ENST00000525241 DRG1Q9Y295 367 aaKnown RBP5.22□□□□□ -1.57
CD44-215ENST00000525241 H0YIZ8 118 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 TJP3O95049 919 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 EBLN1P0CF75 366 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 MYL4P12829 197 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 CYP2C18P33260 490 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 PTH2RP49190 550 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 GATMP50440 423 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 PGDP52209 483 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 COPAP53621 1224 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 PDE1AP54750 535 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 TIRAPP58753 221 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 CYP1B1Q16678 543 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 SLC35G1Q2M3R5 365 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 Q6ZWC4 215 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 WDR53Q7Z5U6 358 aaPredicted RBP5.21□□□□□ -1.58
CD44-215ENST00000525241 GRASPQ7Z6J2 395 aaPredicted RBP5.21□□□□□ -1.58
CD44-215ENST00000525241 FAM98AQ8NCA5 519 aaKnown RBP5.21□□□□□ -1.58
CD44-215ENST00000525241 RP9Q8TA86 221 aaKnown RBP5.21□□□□□ -1.58
CD44-215ENST00000525241 KIAA1191Q96A73 305 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 FAM227BQ96M60 508 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 HAPLN3Q96S86 360 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 SELENOOQ9BVL4 669 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 VN1R3Q9BXE9 311 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 CERS4Q9HA82 394 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 DUSP22Q9NRW4 184 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 VPS51Q9UID3 782 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 USP22Q9UPT9 525 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 HPSEQ9Y251 543 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 MAN2B2Q9Y2E5 1009 aa5.21□□□□□ -1.58
CD44-215ENST00000525241 GCOM1H8Y6P7 765 aaPredicted RBP5.2□□□□□ -1.58
CD44-215ENST00000525241 FAM163BP0C2L3 166 aa5.2□□□□□ -1.58
CD44-215ENST00000525241 NDUFB7P17568 137 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms