RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 UBE3DQ7Z6J8 389 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.78□□□□□ -1.64
CD44-213ENST00000525209 ADGRA1Q86SQ6 560 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 ADCK1Q86TW2 530 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 MICU3Q86XE3 530 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 TMEM151BQ8IW70 566 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 VPS52Q8N1B4 723 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 WDTC1Q8N5D0 677 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 FAM71DQ8N9W8 422 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 POGLUT1Q8NBL1 392 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 PCSK9Q8NBP7 692 aaKnown RBP4.78□□□□□ -1.64
CD44-213ENST00000525209 OR2I1PQ8NGU4 316 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 KIF18AQ8NI77 898 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 XAGE3Q8WTP9 111 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 RNF139Q8WU17 664 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 SCFD2Q8WU76 684 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 BCL7CQ8WUZ0 217 aaPredicted RBP4.78□□□□□ -1.64
CD44-213ENST00000525209 RNF141Q8WVD5 230 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 CFHR4Q92496 578 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 NCSTNQ92542 709 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 RSC1A1Q92681 617 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 WNT8BQ93098 351 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 COG3Q96JB2 828 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 FCRL3Q96P31 734 aaPredicted RBP4.78□□□□□ -1.64
CD44-213ENST00000525209 LENG8Q96PV6 779 aaPredicted RBP4.78□□□□□ -1.64
CD44-213ENST00000525209 TTPALQ9BTX7 342 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 ADI1Q9BV57 179 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 PLVAPQ9BX97 442 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 AP5M1Q9H0R1 490 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 HSD3B7Q9H2F3 369 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 TP63Q9H3D4 680 aaPredicted RBP4.78□□□□□ -1.64
CD44-213ENST00000525209 RWDD1Q9H446 243 aaPredicted RBP4.78□□□□□ -1.64
CD44-213ENST00000525209 MRPL44Q9H9J2 332 aaKnown RBP4.78□□□□□ -1.64
CD44-213ENST00000525209 SMURF2Q9HAU4 748 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 ANO10Q9NW15 660 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 RGS17Q9UGC6 210 aaPredicted RBP4.78□□□□□ -1.64
CD44-213ENST00000525209 FBXL7Q9UJT9 491 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 CPSF3Q9UKF6 684 aaKnown RBP4.78□□□□□ -1.64
CD44-213ENST00000525209 CORO1CQ9ULV4 474 aaPredicted RBP4.78□□□□□ -1.64
CD44-213ENST00000525209 JRKLQ9Y4A0 524 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 N6AMT1Q9Y5N5 214 aa4.78□□□□□ -1.64
CD44-213ENST00000525209 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 ELOA3CA0A087WX78 387 aaPredicted RBP4.77□□□□□ -1.65
CD44-213ENST00000525209 A0A087WZ62 844 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 CYP2D7A0A087X1C5 515 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 A0A0G2JPF8 293 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 ELOA3DA6NLF2 546 aaPredicted RBP4.77□□□□□ -1.65
CD44-213ENST00000525209 HNRNPCL3B7ZW38 293 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 E7EVH7 732 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 FAM229AH3BQW9 127 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 H7BY64 318 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 SCAMP1O15126 338 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 HNRNPRO43390 633 aaKnown RBP4.77□□□□□ -1.65
CD44-213ENST00000525209 SIGLEC6O43699 453 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 MYO1BO43795 1136 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 PEX11AO75192 247 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 BCAS2O75934 225 aaPredicted RBP4.77□□□□□ -1.65
CD44-213ENST00000525209 KRT38O76015 456 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 ADCY5O95622 1261 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 FTCDO95954 541 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 TPOP07202 933 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 GJB1P08034 283 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 HNRNPCL4P0DMR1 293 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 GNAT1P11488 350 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 NEFHP12036 1026 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 SKILP12757 684 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 IL1R1P14778 569 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 IFNGR1P15260 489 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 ARF4P18085 180 aaPredicted RBP4.77□□□□□ -1.65
CD44-213ENST00000525209 EGR1P18146 543 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 CCNA2P20248 432 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 CD9P21926 228 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 NOS3P29474 1203 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 ADSSP30520 456 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 SDHAP31040 664 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 CAPZA2P47755 286 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 CPA2P48052 419 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 NT5C2P49902 561 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 BCAT1P54687 386 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 SESN2P58004 480 aaPredicted RBP4.77□□□□□ -1.65
CD44-213ENST00000525209 KCNJ10P78508 379 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 MRPS5P82675 430 aaKnown RBP4.77□□□□□ -1.65
CD44-213ENST00000525209 COG7P83436 770 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 BEX3Q00994 111 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 PPP3CAQ08209 521 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 CCDC15Q0P6D6 951 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 MGAT2Q10469 447 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 MYO1EQ12965 1108 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 MAN2A1Q16706 1144 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 ELOA3BQ3SY89 546 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 SUPT20HL1Q3ZLR7 823 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 KHDC1Q4VXA5 237 aaKnown RBP4.77□□□□□ -1.65
CD44-213ENST00000525209 ZNF628Q5EBL2 1059 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 GLRA4Q5JXX5 417 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 HP1BP3Q5SSJ5 553 aaPredicted RBP4.77□□□□□ -1.65
CD44-213ENST00000525209 CATSPEREQ5SY80 951 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 TMTC4Q5T4D3 741 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 RCSD1Q6JBY9 416 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 KRT80Q6KB66 452 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 KIAA0408Q6ZU52 694 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms