RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 FBXO32Q969P5 355 aa13.62□□□□□ -0.23
TRAPPC4-205ENST00000525079 CYFIP2Q96F07 1278 aa13.62□□□□□ -0.23
TRAPPC4-205ENST00000525079 CEP63Q96MT8 703 aa13.62□□□□□ -0.23
TRAPPC4-205ENST00000525079 SLITRK1Q96PX8 696 aa13.62□□□□□ -0.23
TRAPPC4-205ENST00000525079 FAM83CQ9BQN1 747 aa13.62□□□□□ -0.23
TRAPPC4-205ENST00000525079 RNF38Q9H0F5 515 aa13.62□□□□□ -0.23
TRAPPC4-205ENST00000525079 EBF3Q9H4W6 596 aa13.62□□□□□ -0.23
TRAPPC4-205ENST00000525079 KIF9Q9HAQ2 790 aa13.62□□□□□ -0.23
TRAPPC4-205ENST00000525079 LMAN1LQ9HAT1 526 aa13.62□□□□□ -0.23
TRAPPC4-205ENST00000525079 METTL14Q9HCE5 456 aaKnown RBP13.62□□□□□ -0.23
TRAPPC4-205ENST00000525079 DMAP1Q9NPF5 467 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC4-205ENST00000525079 HPS4Q9NQG7 708 aa13.62□□□□□ -0.23
TRAPPC4-205ENST00000525079 EHD2Q9NZN4 543 aa13.62□□□□□ -0.23
TRAPPC4-205ENST00000525079 KIAA1468Q9P260 1216 aa13.62□□□□□ -0.23
TRAPPC4-205ENST00000525079 BICDL2A1A5D9 508 aa13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 TNFRSF10BO14763 440 aa13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 RTN3O95197 1032 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 HOXD11P31277 338 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 SLC5A3P53794 718 aa13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 ZXDBP98169 803 aa13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 PLCB2Q00722 1185 aa13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 PAK1Q13153 545 aa13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 RUNX3Q13761 415 aa13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 ZNF268Q14587 947 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 MTF1Q14872 753 aa13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 PON2Q15165 354 aa13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 ITPRIPL2Q3MIP1 535 aa13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 FRMD5Q7Z6J6 570 aa13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 ZNF687Q8N1G0 1237 aa13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 SH3RF2Q8TEC5 729 aa13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 CLDN23Q96B33 292 aa13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 HEXIM2Q96MH2 286 aaKnown RBP13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 HNRNPABQ99729 332 aaKnown RBP13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 SRRTQ9BXP5 876 aaKnown RBP13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 C8orf33Q9H7E9 229 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 CISHQ9NSE2 258 aa13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 RBM12Q9NTZ6 932 aaKnown RBP13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 SMPD4Q9NXE4 827 aa13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 COQ4Q9Y3A0 265 aa13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 WNT6Q9Y6F9 365 aa13.61□□□□□ -0.23
TRAPPC4-205ENST00000525079 MYH10P35580 1976 aa13.6□□□□□ -0.23
TRAPPC4-205ENST00000525079 OTOL1A6NHN0 477 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC4-205ENST00000525079 SCAMP3O14828 347 aaKnown RBP13.6□□□□□ -0.23
TRAPPC4-205ENST00000525079 FAM200BP0CF97 657 aa13.6□□□□□ -0.23
TRAPPC4-205ENST00000525079 TRIM21P19474 475 aaKnown RBP13.6□□□□□ -0.23
TRAPPC4-205ENST00000525079 CTHP32929 405 aa13.6□□□□□ -0.23
TRAPPC4-205ENST00000525079 PPP3CCP48454 512 aa13.6□□□□□ -0.23
TRAPPC4-205ENST00000525079 FMO5P49326 533 aa13.6□□□□□ -0.23
TRAPPC4-205ENST00000525079 USP4Q13107 963 aa13.6□□□□□ -0.23
TRAPPC4-205ENST00000525079 ZNF77Q15935 545 aa13.6□□□□□ -0.23
TRAPPC4-205ENST00000525079 PPP1R26Q5T8A7 1209 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC4-205ENST00000525079 CLEC20AQ6ZU45 233 aa13.6□□□□□ -0.23
TRAPPC4-205ENST00000525079 GPRIN1Q7Z2K8 1008 aa13.6□□□□□ -0.23
TRAPPC4-205ENST00000525079 MAML2Q8IZL2 1156 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC4-205ENST00000525079 SLC4A11Q8NBS3 891 aa13.6□□□□□ -0.23
TRAPPC4-205ENST00000525079 LINC00597Q9H2U6 94 aa13.6□□□□□ -0.23
TRAPPC4-205ENST00000525079 CSNK1G1Q9HCP0 422 aa13.6□□□□□ -0.23
TRAPPC4-205ENST00000525079 DUS2Q9NX74 493 aaKnown RBP13.6□□□□□ -0.23
TRAPPC4-205ENST00000525079 GMIPQ9P107 970 aa13.6□□□□□ -0.23
TRAPPC4-205ENST00000525079 ARHGAP26Q9UNA1 814 aa13.6□□□□□ -0.23
TRAPPC4-205ENST00000525079 HELZP42694 1942 aaKnown RBP13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 HHLA1C9JL84 531 aa13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 LEFTY2O00292 366 aa13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 LAMTOR5O43504 91 aa13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 OAS1P00973 400 aaKnown RBP13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 SP9P0CG40 484 aa13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 MBL2P11226 248 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 CHRNB1P11230 501 aa13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 RPS9P46781 194 aaKnown RBP13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 IFNAR2P48551 515 aa13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 PGFP49763 221 aa13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 RAD23BP54727 409 aa13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 MLLT6P55198 1093 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 MTAPQ13126 283 aa13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 CUL2Q13617 745 aa13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 TSSK4Q6SA08 328 aa13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 RALGPS2Q86X27 583 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 CREBRFQ8IUR6 639 aa13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 TRIML1Q8N9V2 468 aa13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 PDZD8Q8NEN9 1154 aa13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 OSCP1Q8WVF1 389 aa13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 TMEM176AQ96HP8 235 aa13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 CLSTN2Q9H4D0 955 aa13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 CCSER2Q9H7U1 834 aa13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 IL37Q9NZH6 218 aa13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 CPQQ9Y646 472 aa13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 R4GN57 208 aa13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 PATJQ8NI35 1801 aa13.59□□□□□ -0.23
TRAPPC4-205ENST00000525079 COCHO43405 550 aa13.58□□□□□ -0.24
TRAPPC4-205ENST00000525079 ACO1P21399 889 aaKnown RBP13.58□□□□□ -0.24
TRAPPC4-205ENST00000525079 MAGEA9P43362 315 aa13.58□□□□□ -0.24
TRAPPC4-205ENST00000525079 PDE6CP51160 858 aa13.58□□□□□ -0.24
TRAPPC4-205ENST00000525079 SLC7A9P82251 487 aa13.58□□□□□ -0.24
TRAPPC4-205ENST00000525079 CSTF1Q05048 431 aaKnown RBP13.58□□□□□ -0.24
TRAPPC4-205ENST00000525079 PDGFRLQ15198 375 aa13.58□□□□□ -0.24
TRAPPC4-205ENST00000525079 NAIF1Q69YI7 327 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC4-205ENST00000525079 FOXR2Q6PJQ5 311 aa13.58□□□□□ -0.24
TRAPPC4-205ENST00000525079 OVCA2Q8WZ82 227 aa13.58□□□□□ -0.24
TRAPPC4-205ENST00000525079 CHFRQ96EP1 664 aa13.58□□□□□ -0.24
TRAPPC4-205ENST00000525079 MSANTD3Q96H12 275 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms