RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 MACROD1Q9BQ69 325 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 SH2D3AQ9BRG2 576 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 THAP7Q9BT49 309 aaPredicted RBP2.24□□□□□ -2.05
CD44-212ENST00000524922 CNPPD1Q9BV87 410 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 TPSD1Q9BZJ3 242 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 BRD9Q9H8M2 597 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 ARHGEF3Q9NR81 526 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 COL24A1Q17RW2 1714 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 ATP7BP35670 1465 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 CHD4Q14839 1912 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 FNDC1Q4ZHG4 1894 aaPredicted RBP2.24□□□□□ -2.05
CD44-212ENST00000524922 CUL9Q8IWT3 2517 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 OVOS2A0A0G2JMS6 1433 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 OVOS2A0A0J9YW53 1432 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 DAPK1P53355 1430 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 OVOS2Q6IE36 1432 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 ANKRD50Q9ULJ7 1429 aa2.24□□□□□ -2.05
CD44-212ENST00000524922 CICQ96RK0 1608 aaPredicted RBP2.24□□□□□ -2.05
CD44-212ENST00000524922 ANKRD30BQ9BXX2 1392 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 COL14A1Q05707 1796 aaKnown RBP2.23□□□□□ -2.05
CD44-212ENST00000524922 ZNF644Q9H582 1327 aaPredicted RBP2.23□□□□□ -2.05
CD44-212ENST00000524922 TULP4Q9NRJ4 1543 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 NUP188Q5SRE5 1749 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 NRAPQ86VF7 1730 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 NALCNQ8IZF0 1738 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 SHTN1A0MZ66 631 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 PRRT4C9JH25 899 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 PPP6CO00743 305 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 SOAT2O75908 522 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 JTBO76095 146 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 TJP3O95049 919 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 TUBB4AP04350 444 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 MYBL2P10244 700 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 MPGP29372 298 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 CNGA1P29973 690 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 PHKA1P46020 1223 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 GCLCP48506 637 aaPredicted RBP2.23□□□□□ -2.05
CD44-212ENST00000524922 FOXG1P55316 489 aaPredicted RBP2.23□□□□□ -2.05
CD44-212ENST00000524922 TUBA4AP68366 448 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 CYP4F2P78329 520 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 AMPD3Q01432 767 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 NOGQ13253 232 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 ACAP2Q15057 778 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 AARS2Q5JTZ9 985 aaKnown RBP2.23□□□□□ -2.05
CD44-212ENST00000524922 EMC10Q5UCC4 262 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 SUMO4Q6EEV6 95 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 SLC18B1Q6NT16 456 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 CEP85Q6P2H3 762 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 ANKRD16Q6P6B7 361 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 CRELD2Q6UXH1 353 aaPredicted RBP2.23□□□□□ -2.05
CD44-212ENST00000524922 TECPR1Q7Z6L1 1165 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 USP37Q86T82 979 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 C8orf58Q8NAV2 365 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 WASF1Q92558 559 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 RPL36ALQ969Q0 106 aaKnown RBP2.23□□□□□ -2.05
CD44-212ENST00000524922 FSD1LQ9BXM9 530 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 PRSS22Q9GZN4 317 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 SPRTNQ9H040 489 aaPredicted RBP2.23□□□□□ -2.05
CD44-212ENST00000524922 BHMT2Q9H2M3 363 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 DUSP22Q9NRW4 184 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 CFAP97Q9P2B7 532 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 ZDHHC8Q9ULC8 765 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 PCDHA3Q9Y5H8 950 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 METP08581 1390 aa2.23□□□□□ -2.05
CD44-212ENST00000524922 KNDC1Q76NI1 1749 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 SHANK3Q9BYB0 1731 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 SPATA31A1Q5TZJ5 1347 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 BRWD3Q6RI45 1802 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 PXDNLA1KZ92 1463 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 CYP2D7A0A087X1C5 515 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 XPOTO43592 962 aaKnown RBP2.22□□□□□ -2.05
CD44-212ENST00000524922 VPS4BO75351 444 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 KATNA1O75449 491 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 AHSGP02765 367 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 IGKV2-30P06310 120 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 PIM1P11309 404 aaPredicted RBP2.22□□□□□ -2.05
CD44-212ENST00000524922 CERS1P27544 350 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 CD6P30203 668 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 PTGER1P34995 402 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 RGS19P49795 217 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 CLCN2P51788 898 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 LINC00205P59089 165 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 FAM153CQ494X1 144 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 ZNF618Q5T7W0 954 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 PRAMEF17Q5VTA0 474 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 AWAT2Q6E213 333 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 PPP4R3AQ6IN85 833 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 SLC2A7Q6PXP3 512 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 TMEM108Q6UXF1 575 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 CATSPERGQ6ZRH7 1159 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 CHSY1Q86X52 802 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 GALNT16Q8N428 558 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 C3orf20Q8ND61 904 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 ATRIPQ8WXE1 791 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 RITA1Q96K30 269 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 FCRL4Q96PJ5 515 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 SYT17Q9BSW7 474 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 ASPSCR1Q9BZE9 553 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 TMX1Q9H3N1 280 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms