RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 TMEM247A6NEH6 219 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 ZBTB39O15060 712 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 ITGB5P18084 799 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 TFB1MQ8WVM0 346 aaKnown RBP17.72■□□□□ 0.43
BEST1-203ENST00000524877 VPS11Q9H270 941 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 COPEO14579 308 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 BAG2O95816 211 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 DDX5P17844 614 aaKnown RBP17.72■□□□□ 0.43
BEST1-203ENST00000524877 RTP1P59025 263 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 IZUMO3Q5VZ72 239 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 PPP2R2DQ66LE6 453 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 ABHD15Q6UXT9 468 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 PCDHA2Q9Y5H9 948 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 SOWAHBA6NEL2 793 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 CYP11B1P15538 503 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 ADCY2Q08462 1091 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 C1orf186Q6ZWK4 172 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 RMI1Q9H9A7 625 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 TSPAN16Q9UKR8 245 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 PRPF4O43172 522 aaKnown RBP eCLIP17.72■□□□□ 0.43
BEST1-203ENST00000524877 GLUD2P49448 558 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 DHX34Q14147 1143 aaKnown RBP17.72■□□□□ 0.43
BEST1-203ENST00000524877 PDK2Q15119 407 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 NUDCD3Q8IVD9 361 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 ST13P4Q8IZP2 240 aaPredicted RBP17.72■□□□□ 0.43
BEST1-203ENST00000524877 IPMKQ8NFU5 416 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 SLC13A4Q9UKG4 626 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 CDH9Q9ULB4 789 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 CLCA2Q9UQC9 943 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 ZMYND10O75800 440 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 MMEP08473 750 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 PAEPP09466 180 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 SLC7A5Q01650 507 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 RBBP7Q16576 425 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 FAM172AQ8WUF8 416 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 AGPAT5Q9NUQ2 364 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 PLCH1Q4KWH8 1693 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 ENO4A6NNW6 628 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 ATMINO43313 823 aaPredicted RBP17.71■□□□□ 0.43
BEST1-203ENST00000524877 MYO1DO94832 1006 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 GRM5P41594 1212 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 RENBPP51606 427 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 GEMP55040 296 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 SMTNL2Q2TAL5 461 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 FNDC3BQ53EP0 1204 aaKnown RBP17.71■□□□□ 0.43
BEST1-203ENST00000524877 YIPF2Q9BWQ6 316 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 PACSIN2Q9UNF0 486 aaPredicted RBP17.71■□□□□ 0.43
BEST1-203ENST00000524877 CSH1P0DML2 217 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 CSH2P0DML3 217 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 COPS2P61201 443 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 POU5F1BQ06416 359 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 LINC00523Q86TU6 105 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.71■□□□□ 0.43
BEST1-203ENST00000524877 INTS9Q9NV88 658 aaKnown RBP17.71■□□□□ 0.43
BEST1-203ENST00000524877 SMPD4Q9NXE4 827 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 KLK7P49862 253 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 ACLYP53396 1101 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 PDAP1Q13442 181 aaKnown RBP17.71■□□□□ 0.43
BEST1-203ENST00000524877 C6orf118Q5T5N4 469 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 ATP11CQ8NB49 1132 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 PAK5Q9P286 719 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 INTUQ9ULD6 942 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 ADGRG1Q9Y653 693 aa17.71■□□□□ 0.43
BEST1-203ENST00000524877 FAM47DPA6NHR8 397 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 FOXN3O00409 490 aaPredicted RBP17.7■□□□□ 0.42
BEST1-203ENST00000524877 KRT75O95678 551 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 HSPA4LO95757 839 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 BDNFP23560 247 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 SESN2P58004 480 aaPredicted RBP17.7■□□□□ 0.42
BEST1-203ENST00000524877 ADIGQ0VDE8 80 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 RAB30Q15771 203 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 CCL14Q16627 93 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 CCDC157Q569K6 752 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 TSHZ1Q6ZSZ6 1077 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 RASSF10A6NK89 507 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 ANKRD63C9JTQ0 380 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 SLCO1A2P46721 670 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 FASTKD1Q53R41 847 aaKnown RBP17.7■□□□□ 0.42
BEST1-203ENST00000524877 CALML6Q8TD86 181 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 TSPAN17Q96FV3 270 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 APOL5Q9BWW9 433 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 BATF3Q9NR55 127 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 GTF3C4Q9UKN8 822 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 TRAF3IP3Q9Y228 551 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 HPSEQ9Y251 543 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 PEX10O60683 326 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 AKAP3O75969 853 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 NAPEPLDQ6IQ20 393 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 MFN1Q8IWA4 741 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 ZBED8Q8IZ13 594 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 OXCT2Q9BYC2 517 aaPredicted RBP17.7■□□□□ 0.42
BEST1-203ENST00000524877 CRLS1Q9UJA2 301 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 LRRIQ3A6PVS8 624 aaPredicted RBP17.7■□□□□ 0.42
BEST1-203ENST00000524877 LBX1P52954 281 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 PPM1NQ8N819 430 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.7■□□□□ 0.42
BEST1-203ENST00000524877 SPTLC1O15269 473 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 TREHO43280 583 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 MICAL2O94851 1124 aa17.7■□□□□ 0.42
BEST1-203ENST00000524877 RETSATQ6NUM9 610 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms