RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 TBC1D4O60343 1298 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 GRAP2O75791 330 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 AP1G2O75843 785 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 ENDOD1O94919 500 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 TRUB2O95900 331 aaKnown RBP12.34□□□□□ -0.43
CSTF3-205ENST00000524775 GALTP07902 379 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 FAM200BP0CF97 657 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 LCP1P13796 627 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 FGFR3P22607 806 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 MIPP30301 263 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 PTPN7P35236 360 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 PCK1P35558 622 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 PTGIRP43119 386 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 NDUFV1P49821 464 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 ARSEP51690 589 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 SNX16P57768 344 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 SLC7A5Q01650 507 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 RNASELQ05823 741 aaKnown RBP12.34□□□□□ -0.43
CSTF3-205ENST00000524775 BRD3Q15059 726 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 CLUL1Q15846 466 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 C15orf59Q2T9L4 293 aaPredicted RBP12.34□□□□□ -0.43
CSTF3-205ENST00000524775 SEL1L2Q5TEA6 688 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 CCNI2Q6ZMN8 369 aaPredicted RBP12.34□□□□□ -0.43
CSTF3-205ENST00000524775 GPRIN1Q7Z2K8 1008 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 BNIPLQ7Z465 357 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 POLNQ7Z5Q5 900 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 RCOR2Q8IZ40 523 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 C12orf50Q8NA57 414 aaPredicted RBP12.34□□□□□ -0.43
CSTF3-205ENST00000524775 CMASQ8NFW8 434 aaPredicted RBP12.34□□□□□ -0.43
CSTF3-205ENST00000524775 BCL7CQ8WUZ0 217 aaPredicted RBP12.34□□□□□ -0.43
CSTF3-205ENST00000524775 RAPGEF5Q92565 580 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 NDRG1Q92597 394 aaKnown RBP12.34□□□□□ -0.43
CSTF3-205ENST00000524775 SLITRK1Q96PX8 696 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 KCNK16Q96T55 309 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 NAP1L3Q99457 506 aaPredicted RBP12.34□□□□□ -0.43
CSTF3-205ENST00000524775 MED10Q9BTT4 135 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 DDX23Q9BUQ8 820 aaKnown RBP12.34□□□□□ -0.43
CSTF3-205ENST00000524775 RHOBTB2Q9BYZ6 727 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 GPR62Q9BZJ7 368 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 ZCWPW1Q9H0M4 648 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 DDX47Q9H0S4 455 aaKnown RBP12.34□□□□□ -0.43
CSTF3-205ENST00000524775 RC3H2Q9HBD1 1191 aaKnown RBP12.34□□□□□ -0.43
CSTF3-205ENST00000524775 KRT82Q9NSB4 513 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 RNF216Q9NWF9 866 aaPredicted RBP12.34□□□□□ -0.43
CSTF3-205ENST00000524775 LRFN2Q9ULH4 789 aa12.34□□□□□ -0.43
CSTF3-205ENST00000524775 PRG3Q9Y2Y8 225 aaPredicted RBP12.34□□□□□ -0.43
CSTF3-205ENST00000524775 TBKBP1A7MCY6 615 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 SYN3O14994 580 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 DGKIO75912 1065 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 ZRANB2O95218 330 aaKnown RBP eCLIP12.33□□□□□ -0.44
CSTF3-205ENST00000524775 ALDH2P05091 517 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 FYNP06241 537 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 TUBBP07437 444 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 GLI1P08151 1106 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 PDGFRAP16234 1089 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 TFE3P19532 575 aaPredicted RBP12.33□□□□□ -0.44
CSTF3-205ENST00000524775 PTPN9P43378 593 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 CDR1P51861 262 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 MAP3K7CLP57077 242 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 RBM10P98175 930 aaKnown RBP12.33□□□□□ -0.44
CSTF3-205ENST00000524775 ADCY2Q08462 1091 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 IKBKEQ14164 716 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 OTUD1Q5VV17 481 aaPredicted RBP12.33□□□□□ -0.44
CSTF3-205ENST00000524775 TTC27Q6P3X3 843 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 MFSD7Q6UXD7 560 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 NECAB2Q7Z6G3 386 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 ADAT2Q7Z6V5 191 aaKnown RBP12.33□□□□□ -0.44
CSTF3-205ENST00000524775 TMEM173Q86WV6 379 aaPredicted RBP12.33□□□□□ -0.44
CSTF3-205ENST00000524775 KLHL7Q8IXQ5 586 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 THEM5Q8N1Q8 247 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 HNRNPLLQ8WVV9 542 aaKnown RBP12.33□□□□□ -0.44
CSTF3-205ENST00000524775 RUBCNQ92622 972 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 NT5C3BQ969T7 300 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 ZNF689Q96CS4 500 aaPredicted RBP12.33□□□□□ -0.44
CSTF3-205ENST00000524775 FAM193BQ96PV7 902 aaPredicted RBP12.33□□□□□ -0.44
CSTF3-205ENST00000524775 COLEC11Q9BWP8 271 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 SLITRK6Q9H5Y7 841 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 GDF3Q9NR23 364 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 ASNSD1Q9NWL6 643 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 ADAM28Q9UKQ2 775 aa12.33□□□□□ -0.44
CSTF3-205ENST00000524775 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.33□□□□□ -0.44
CSTF3-205ENST00000524775 ABHD14A-ACY1A0A1B0GW23 586 aa12.32□□□□□ -0.44
CSTF3-205ENST00000524775 CCDC151A5D8V7 595 aa12.32□□□□□ -0.44
CSTF3-205ENST00000524775 PI4K2BG5E9Z4 385 aa12.32□□□□□ -0.44
CSTF3-205ENST00000524775 PHF2O75151 1096 aa12.32□□□□□ -0.44
CSTF3-205ENST00000524775 TADA2AO75478 443 aa12.32□□□□□ -0.44
CSTF3-205ENST00000524775 ZMYND10O75800 440 aa12.32□□□□□ -0.44
CSTF3-205ENST00000524775 MYBL2P10244 700 aa12.32□□□□□ -0.44
CSTF3-205ENST00000524775 RALAP11233 206 aa12.32□□□□□ -0.44
CSTF3-205ENST00000524775 TNFRSF8P28908 595 aa12.32□□□□□ -0.44
CSTF3-205ENST00000524775 CDKN2BP42772 138 aa12.32□□□□□ -0.44
CSTF3-205ENST00000524775 HDAC4P56524 1084 aa12.32□□□□□ -0.44
CSTF3-205ENST00000524775 COPS2P61201 443 aa12.32□□□□□ -0.44
CSTF3-205ENST00000524775 MRPS5P82675 430 aaKnown RBP12.32□□□□□ -0.44
CSTF3-205ENST00000524775 YWHAHQ04917 246 aaPredicted RBP12.32□□□□□ -0.44
CSTF3-205ENST00000524775 ADIGQ0VDE8 80 aa12.32□□□□□ -0.44
CSTF3-205ENST00000524775 TRADDQ15628 312 aa12.32□□□□□ -0.44
CSTF3-205ENST00000524775 EFHC1Q5JVL4 640 aa12.32□□□□□ -0.44
CSTF3-205ENST00000524775 VARS2Q5ST30 1063 aaKnown RBP12.32□□□□□ -0.44
CSTF3-205ENST00000524775 PM20D1Q6GTS8 502 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms