RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 SATB1Q01826 763 aa11.57□□□□□ -0.56
PVT1-216ENST00000523068 TAF10Q12962 218 aa11.57□□□□□ -0.56
PVT1-216ENST00000523068 GAS6Q14393 721 aa11.57□□□□□ -0.56
PVT1-216ENST00000523068 TMEM196Q5HYL7 178 aa11.57□□□□□ -0.56
PVT1-216ENST00000523068 ACOT1Q86TX2 421 aa11.57□□□□□ -0.56
PVT1-216ENST00000523068 FAM35AQ86V20 835 aa11.57□□□□□ -0.56
PVT1-216ENST00000523068 FMR1NBQ8N0W7 255 aaPredicted RBP11.57□□□□□ -0.56
PVT1-216ENST00000523068 SUMF1Q8NBK3 374 aa11.57□□□□□ -0.56
PVT1-216ENST00000523068 SH3RF2Q8TEC5 729 aa11.57□□□□□ -0.56
PVT1-216ENST00000523068 OVCA2Q8WZ82 227 aa11.57□□□□□ -0.56
PVT1-216ENST00000523068 GSDMAQ96QA5 445 aa11.57□□□□□ -0.56
PVT1-216ENST00000523068 EPC1Q9H2F5 836 aa11.57□□□□□ -0.56
PVT1-216ENST00000523068 DMAP1Q9NPF5 467 aaPredicted RBP11.57□□□□□ -0.56
PVT1-216ENST00000523068 RBM12Q9NTZ6 932 aaKnown RBP11.57□□□□□ -0.56
PVT1-216ENST00000523068 COMMD8Q9NX08 183 aa11.57□□□□□ -0.56
PVT1-216ENST00000523068 KIAA1549LQ6ZVL6 1849 aa11.57□□□□□ -0.56
PVT1-216ENST00000523068 FAM186AA6NE01 2351 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 CETN3O15182 167 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 STX10O60499 249 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 AP1G2O75843 785 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 NFATC1O95644 943 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 EPB41P11171 864 aaKnown RBP11.56□□□□□ -0.56
PVT1-216ENST00000523068 ARSAP15289 507 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 DRD1P21728 446 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 GTF2H1P32780 548 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 GJA4P35212 333 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 GCLMP48507 274 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 CACNA2D1P54289 1103 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 SLC7A9P82251 487 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 IFRD2Q12894 506 aaPredicted RBP11.56□□□□□ -0.56
PVT1-216ENST00000523068 PNOCQ13519 176 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 EML3Q32P44 896 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 ZCWPW2Q504Y3 356 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 COBLL1Q53SF7 1204 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 C1orf220Q5T0J3 134 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 ZNF658Q5TYW1 1059 aaPredicted RBP11.56□□□□□ -0.56
PVT1-216ENST00000523068 KRT39Q6A163 491 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 DDX42Q86XP3 938 aaKnown RBP eCLIP11.56□□□□□ -0.56
PVT1-216ENST00000523068 FUKQ8N0W3 1084 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 CRYBG2Q8N1P7 616 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 RIN3Q8TB24 985 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 FBXO32Q969P5 355 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 TIGD1Q96MW7 591 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 KCNK16Q96T55 309 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 TSG101Q99816 390 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 SDCBP2Q9H190 292 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 ECT2Q9H8V3 914 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 CYP3A43Q9HB55 503 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 TMEM8AQ9HCN3 771 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 NCDNQ9UBB6 729 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 RAB23Q9ULC3 237 aa11.56□□□□□ -0.56
PVT1-216ENST00000523068 ATG2BQ96BY7 2078 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 OTOL1A6NHN0 477 aaPredicted RBP11.55□□□□□ -0.56
PVT1-216ENST00000523068 LEFTY2O00292 366 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 SLC9A3R1O14745 358 aaPredicted RBP11.55□□□□□ -0.56
PVT1-216ENST00000523068 OLFM2O95897 454 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 MBD3O95983 291 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 OAS1P00973 400 aaKnown RBP11.55□□□□□ -0.56
PVT1-216ENST00000523068 TRIM49P0CI25 452 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 TRIM49CP0CI26 452 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 CNR2P34972 360 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 ASPAP45381 313 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 NDST1P52848 882 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 MCCD1P59942 119 aaPredicted RBP11.55□□□□□ -0.56
PVT1-216ENST00000523068 PPP3CAQ08209 521 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 INCA1Q0VD86 236 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 FBXO43Q4G163 708 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 WDR44Q5JSH3 913 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 SPOPLQ6IQ16 392 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 Q6ZS52 159 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 PAQR9Q6ZVX9 377 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 SMYD4Q8IYR2 804 aaPredicted RBP11.55□□□□□ -0.56
PVT1-216ENST00000523068 TTC39CQ8N584 583 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 GPR161Q8N6U8 529 aaKnown RBP11.55□□□□□ -0.56
PVT1-216ENST00000523068 CCDC26Q8TAB7 109 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 TAS1R2Q8TE23 839 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 CD101Q93033 1021 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 SMARCE1Q969G3 411 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 ELMO3Q96BJ8 720 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 FAXDC2Q96IV6 333 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 P2RY13Q9BPV8 354 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 NT5C1AQ9BXI3 368 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 NIF3L1Q9GZT8 377 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 FBXO44Q9H4M3 255 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 MMRN2Q9H8L6 949 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 CSNK1G1Q9HCP0 422 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 KRT82Q9NSB4 513 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 TMEM30AQ9NV96 361 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 SMG5Q9UPR3 1016 aaKnown RBP11.55□□□□□ -0.56
PVT1-216ENST00000523068 CPQQ9Y646 472 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 WNT6Q9Y6F9 365 aa11.55□□□□□ -0.56
PVT1-216ENST00000523068 RALGAPA1Q6GYQ0 2036 aa11.54□□□□□ -0.56
PVT1-216ENST00000523068 TNFRSF10BO14763 440 aa11.54□□□□□ -0.56
PVT1-216ENST00000523068 FAM200BP0CF97 657 aa11.54□□□□□ -0.56
PVT1-216ENST00000523068 MBL2P11226 248 aaPredicted RBP11.54□□□□□ -0.56
PVT1-216ENST00000523068 CCDC130P13994 396 aa11.54□□□□□ -0.56
PVT1-216ENST00000523068 HOXA6P31267 233 aa11.54□□□□□ -0.56
PVT1-216ENST00000523068 PRCPP42785 496 aa11.54□□□□□ -0.56
PVT1-216ENST00000523068 TUBP50607 506 aa11.54□□□□□ -0.56
PVT1-216ENST00000523068 GALK1P51570 392 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms