RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 C19orf67A6NJJ6 358 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 LOC730098B7Z3J9 87 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 TULP2O00295 520 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 BEST1O76090 585 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 FAM200BP0CF97 657 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 FSHRP23945 695 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 HOXA9P31269 272 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 GPD2P43304 727 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 ALDH1A3P47895 512 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 BCAT1P54687 386 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 PDE4CQ08493 712 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 ASTE1Q2TB18 679 aaPredicted RBP12.6□□□□□ -0.39
PVT1-215ENST00000522963 PABPC1LQ4VXU2 614 aaKnown RBP12.6□□□□□ -0.39
PVT1-215ENST00000522963 CYP26C1Q6V0L0 522 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 CLEC20AQ6ZU45 233 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 OTOP3Q7RTS5 596 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 RNF135Q8IUD6 432 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 LRRC8AQ8IWT6 810 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 WDTC1Q8N5D0 677 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 ZMIZ2Q8NF64 920 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 ST13P5Q8NFI4 369 aaPredicted RBP12.6□□□□□ -0.39
PVT1-215ENST00000522963 SLC30A5Q8TAD4 765 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 ING5Q8WYH8 240 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 SECISBP2LQ93073 1101 aaKnown RBP12.6□□□□□ -0.39
PVT1-215ENST00000522963 ACSF2Q96CM8 615 aaPredicted RBP12.6□□□□□ -0.39
PVT1-215ENST00000522963 SMARCD1Q96GM5 515 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 ZNF512Q96ME7 567 aaPredicted RBP12.6□□□□□ -0.39
PVT1-215ENST00000522963 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.6□□□□□ -0.391e-6■□□□□ 9.2
PVT1-215ENST00000522963 DUSP16Q9BY84 665 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 LHX5Q9H2C1 402 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 PDCL3Q9H2J4 239 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 NHEJ1Q9H9Q4 299 aaPredicted RBP12.6□□□□□ -0.39
PVT1-215ENST00000522963 SEPT11Q9NVA2 429 aaKnown RBP12.6□□□□□ -0.39
PVT1-215ENST00000522963 DNMT3BQ9UBC3 853 aaKnown RBP12.6□□□□□ -0.39
PVT1-215ENST00000522963 ADAMTS1Q9UHI8 967 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 CYTH4Q9UIA0 394 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 YIPF1Q9Y548 306 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 DOCK8Q8NF50 2099 aa12.6□□□□□ -0.39
PVT1-215ENST00000522963 DENND4AQ7Z401 1863 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 UNC80Q8N2C7 3258 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 A0A087X0T9 212 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 SOWAHDA6NJG2 315 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 CYP1A1P04798 512 aaPredicted RBP12.59□□□□□ -0.39
PVT1-215ENST00000522963 RHOP08100 348 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 FAM228BP0C875 321 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 SETSIPP0DME0 302 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 HAPLN1P10915 354 aaPredicted RBP12.59□□□□□ -0.39
PVT1-215ENST00000522963 MYL4P12829 197 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 NPR3P17342 541 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 PTPN2P17706 415 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 CDH5P33151 784 aaPredicted RBP12.59□□□□□ -0.39
PVT1-215ENST00000522963 MAGEA11P43364 429 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 GPR15P49685 360 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 EPHB3P54753 998 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 MAP3K7CLP57077 242 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 NOMO3P69849 1222 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 BST2Q10589 180 aaKnown RBP12.59□□□□□ -0.39
PVT1-215ENST00000522963 CLEC16AQ2KHT3 1053 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 VSTM1Q6UX27 236 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 RAD9BQ6WBX8 426 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 TRIM72Q6ZMU5 477 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 TMTC1Q8IUR5 882 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 SCN4BQ8IWT1 228 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 HS6ST3Q8IZP7 471 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 C1orf131Q8NDD1 294 aaKnown RBP12.59□□□□□ -0.39
PVT1-215ENST00000522963 SLC35F5Q8WV83 523 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 KHSRPQ92945 711 aaKnown RBP eCLIP12.59□□□□□ -0.39
PVT1-215ENST00000522963 CCDC42Q96M95 316 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 KCNK16Q96T55 309 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 CSNK1G1Q9HCP0 422 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 TAS2R14Q9NYV8 317 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 LIMD1Q9UGP4 676 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 MUTYHQ9UIF7 546 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 MAFFQ9ULX9 164 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 NOTCH4Q99466 2003 aa12.59□□□□□ -0.39
PVT1-215ENST00000522963 MYH10P35580 1976 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 HHLA1C9JL84 531 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 F8VP50 259 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 XPO1O14980 1071 aaKnown RBP12.58□□□□□ -0.4
PVT1-215ENST00000522963 LSM8O95777 96 aaKnown RBP12.58□□□□□ -0.4
PVT1-215ENST00000522963 ASGR2P07307 311 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 UNGP13051 313 aaPredicted RBP12.58□□□□□ -0.4
PVT1-215ENST00000522963 ANXA13P27216 316 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 GRIK1P39086 918 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 KIF11P52732 1056 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 CCZ1BP86790 482 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 CCZ1P86791 482 aaPredicted RBP12.58□□□□□ -0.4
PVT1-215ENST00000522963 GFPT1Q06210 699 aaPredicted RBP12.58□□□□□ -0.4
PVT1-215ENST00000522963 PLD1Q13393 1074 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 MTF1Q14872 753 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 TAF12Q16514 161 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 DDR2Q16832 855 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 SDHAF4Q5VUM1 108 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 NAA35Q5VZE5 725 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 PMF1Q6P1K2 205 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 RTL10Q7L3V2 364 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 PIGZQ86VD9 579 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 VPS36Q86VN1 386 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 DNAAF5Q86Y56 855 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 TMEM35BQ8NCS4 154 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms